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CmaCh01G018460 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G018460
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationCma_Chr01:12185641..12186045
RNA-Seq ExpressionCmaCh01G018460
SyntenyCmaCh01G018460
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]4.5e-3076.14Show/hide
Query:  KSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        KS + A  SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRN+DGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6696.27Show/hide
Query:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
        MAVLGA+AAAINPINFPFLLFHRQQTKYNCTI NPVD KTMSSYGRKSKAVA QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
Subjt:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA

Query:  FKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        FKALCQSDRN+DGKLGRDEIDKFIKYLMSEGYVV
Subjt:  FKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-2978.75Show/hide
Query:  SESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        S+S YS KEL+EIF+QMDTNEDGGLGLFEIK ALKQLDAEFP+HLA+KALC +DRN DGKLG +EID+F+KY++SEGYVV
Subjt:  SESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-6797.76Show/hide
Query:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
        MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVD KTMSSYGRKSKAVA QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA
Subjt:  MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLA

Query:  FKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        FKALCQSDRN+DGKLGRDEIDKFIKYLMSEGYVV
Subjt:  FKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]7.6e-3071.58Show/hide
Query:  SSYGRKSKAVAP--QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        S +  K+K+ +P   SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRN+DGKLG +EID+F+KY+MS+GYVV
Subjt:  SSYGRKSKAVAP--QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

TrEMBL top hitse value%identityAlignment
A0A0A0L3J7 Uncharacterized protein3.7e-3071.58Show/hide
Query:  SSYGRKSKAVAP--QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        S +  K+K+ +P   SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRN+DGKLG +EID+F+KY+MS+GYVV
Subjt:  SSYGRKSKAVAP--QSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

A0A5D3D9N2 Putative calcium-binding protein CML102.2e-3076.14Show/hide
Query:  KSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        KS + A  SES YSAKELR+IFNQMDTNEDGGLGLFEIK ALK+LDAE PVHLA+ ALC +DRN+DGKLG +EID+F+KY+MS+GYVV
Subjt:  KSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

A0A5N6RQU3 Uncharacterized protein5.7e-0745.21Show/hide
Query:  KELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        ++LREIF Q D N DG L   E+K A K L A  P   AF  L Q+D N DG +G +E++  +KY    GY V
Subjt:  KELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

A0A6A1UYX3 Putative calcium-binding protein CML105.7e-0738.16Show/hide
Query:  YSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        Y+ ++LR +F + DTN DG L   E++ A + L +  P   AF+AL  +DRN DG++   E+D  + Y +  GY V
Subjt:  YSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

A0A6J1BIL5 probable calcium-binding protein CML104.7e-0935.71Show/hide
Query:  DCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV
        DC+ + ++G K  +    S   ++  +L  +F + D+N DG L   E++ A   L + FP + AF AL Q+D+N DG + +DE+D  I+Y +S GY V
Subjt:  DCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRNKDGKLGRDEIDKFIKYLMSEGYVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTGGAGCTCAAGCCGCCGCCATTAATCCTATAAATTTTCCCTTCCTCCTCTTCCATCGTCAACAAACCAAATACAACTGCACGATCGGAAACCCAGTCGA
TTGCAAAACGATGTCGTCGTACGGTCGGAAATCGAAGGCGGTGGCCCCCCAGTCGGAGAGCGGGTACTCGGCGAAGGAACTGAGAGAGATATTTAACCAGATGGACACGA
ATGAAGATGGTGGATTGGGATTGTTCGAGATCAAGGAAGCTTTGAAGCAACTGGACGCTGAATTCCCAGTTCATCTTGCCTTCAAGGCGCTCTGCCAATCCGATCGAAAC
AAAGATGGAAAGCTTGGTCGGGACGAGATCGATAAGTTCATCAAGTACTTGATGAGCGAAGGTTATGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTGGAGCTCAAGCCGCCGCCATTAATCCTATAAATTTTCCCTTCCTCCTCTTCCATCGTCAACAAACCAAATACAACTGCACGATCGGAAACCCAGTCGA
TTGCAAAACGATGTCGTCGTACGGTCGGAAATCGAAGGCGGTGGCCCCCCAGTCGGAGAGCGGGTACTCGGCGAAGGAACTGAGAGAGATATTTAACCAGATGGACACGA
ATGAAGATGGTGGATTGGGATTGTTCGAGATCAAGGAAGCTTTGAAGCAACTGGACGCTGAATTCCCAGTTCATCTTGCCTTCAAGGCGCTCTGCCAATCCGATCGAAAC
AAAGATGGAAAGCTTGGTCGGGACGAGATCGATAAGTTCATCAAGTACTTGATGAGCGAAGGTTATGTTGTTTGA
Protein sequenceShow/hide protein sequence
MAVLGAQAAAINPINFPFLLFHRQQTKYNCTIGNPVDCKTMSSYGRKSKAVAPQSESGYSAKELREIFNQMDTNEDGGLGLFEIKEALKQLDAEFPVHLAFKALCQSDRN
KDGKLGRDEIDKFIKYLMSEGYVV