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CmaCh01G018470 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G018470
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionEF hand calcium-binding protein family
Genome locationCma_Chr01:12192931..12193212
RNA-Seq ExpressionCmaCh01G018470
SyntenyCmaCh01G018470
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2674.12Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYT
        KSK  + R KLSREQLSVIFRNHDGDGDGRL+++ELT AFRYIG+F+PSYRA  AL H DS+ DGFI E++FE+L+NYAEKRKYT
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2671.26Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        K+K S+ R KLSREQLSVIFRNHDGDGDGRL+++ELTEAFRYIG+F+PSYRA  AL + DS++DGFI E++FE L+NY EKR YT+V
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

KAG6608482.1 Polcalcin Syr v 3, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4093.55Show/hide
Query:  MDPTEDKSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        M+PTE+KSKKSKKRSKLSREQLSVIFRNHDGDGDGRL+ SELTEAFRYIGSFMPSYRAGKALSHADSN DGFINEEEFE+LINYAEKRKYTVV
Subjt:  MDPTEDKSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-2773.56Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        KSK  + R KLSREQLSVIFRNHDGDGDGRL+++ELT AFRYIG+F+PSYRA  AL H DS+ DGFI E++FE+L+NYAEKRKYTV+
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]2.5e-2466.67Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        KSK    R+KLSREQL +IFRNHD D DGRL+++ELTEAFRYIG+F+P+YRA  AL HADS++DGFI E++FE L+NYAE+R+YT++
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein1.2e-2466.67Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        KSK    R+KLSREQL +IFRNHD D DGRL+++ELTEAFRYIG+F+P+YRA  AL HADS++DGFI E++FE L+NYAE+R+YT++
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

A0A438IT52 Uncharacterized protein3.4e-1455.26Show/hide
Query:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV
        L+ EQ+  IFR +D DGD RL+ +EL EAF+++GS  P +RA +ALS AD+NKDG+I+EEE   L+NYA K  Y V
Subjt:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV

A0A5A7VDB9 Putative calcium-binding protein CML272.7e-2465.52Show/hide
Query:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV
        +SK    R++LSREQL +IFRNHD D DGRL+++ELTEAFRYIG+F+P YRA  AL HADS++DGFI+E++FE+L+NYAE+R+YTV+
Subjt:  KSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV

A0A6B9WA78 Calmodulin-like protein 541.3e-1353.95Show/hide
Query:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV
        L+ +Q+  IFR +D DGD RL+ +EL EAF+++GS  P +RA +ALS AD+NKDG+I+EEE   L+NYA K  Y V
Subjt:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV

A5B016 Uncharacterized protein7.5e-1453.95Show/hide
Query:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV
        L+ EQ+  IFR +D +GD RL+ +EL EAF+++GS  P +RA +ALS AD+NKDG+I+EEE   L+NYA K  Y V
Subjt:  LSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTV

SwissProt top hitse value%identityAlignment
P58171 Polcalcin Syr v 38.0e-0538.98Show/hide
Query:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFE
        +L  IF+  D +GDG+++SSEL E  + +GS  P     + ++  D++ DGFI+ EEF+
Subjt:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFE

Q2QVI1 Probable calcium-binding protein CML283.6e-0536.07Show/hide
Query:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML
        +L  +F+  D +GDGR+   EL E+F+  G F+P       +   D+N DG ++ EEF +L
Subjt:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML

Q6L4D4 Probable calcium-binding protein CML151.4e-0432.35Show/hide
Query:  SKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF
        +K R   + ++   +FR  D +GDGR++ +EL   FR +G  +      + +  ADS+ DG+I+  EF
Subjt:  SKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF

Q8L3R2 Probable calcium-binding protein CML411.4e-0431.82Show/hide
Query:  KRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF
        K  + S+E+L  +F + D DGDG++++ EL   F  +G ++    A +A++  D++ DG +  E+F
Subjt:  KRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF

Q9M7R0 Calcium-binding allergen Ole e 81.4e-0432.76Show/hide
Query:  IFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLI
        +F   D +GDG+++  EL    + +GS       G+ +   D++KDGFIN +EF   +
Subjt:  IFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLI

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein2.2e-0532.26Show/hide
Query:  EQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML
        E+L  +F   D +GDG+++  EL   F+ +G+        + L   D+++DG+IN +EF  L
Subjt:  EQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML

AT1G18210.2 Calcium-binding EF-hand family protein2.2e-0532.26Show/hide
Query:  EQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML
        E+L  +F   D +GDG+++  EL   F+ +G+        + L   D+++DG+IN +EF  L
Subjt:  EQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEML

AT1G73630.1 EF hand calcium-binding protein family1.3e-0536.21Show/hide
Query:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF
        +L  +F   D +GDG+++ SEL   F+ +G+        + L   D + DGFIN+EEF
Subjt:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF

AT3G50770.1 calmodulin-like 419.7e-0631.82Show/hide
Query:  KRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF
        K  + S+E+L  +F + D DGDG++++ EL   F  +G ++    A +A++  D++ DG +  E+F
Subjt:  KRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF

AT4G03290.1 EF hand calcium-binding protein family1.7e-0534.48Show/hide
Query:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF
        +L+ +F+  D DGDG++ + EL E+F+ +G  +P     + +   D N DG ++ EEF
Subjt:  QLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGACAGAAGACAAAAGCAAGAAGTCGAAGAAGAGGTCGAAGCTTTCAAGAGAGCAACTTAGCGTAATCTTCAGAAACCACGACGGCGACGGCGACGGC
CGTCTCAACTCCTCCGAGCTCACCGAAGCTTTTCGGTACATCGGTTCCTTTATGCCTTCGTACAGAGCTGGTAAGGCTCTTTCTCACGCCGATTCTAACAAAGAC
GGATTCATCAACGAGGAGGAATTCGAAATGCTCATCAATTATGCTGAAAAACGCAAATACACCGTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCGACAGAAGACAAAAGCAAGAAGTCGAAGAAGAGGTCGAAGCTTTCAAGAGAGCAACTTAGCGTAATCTTCAGAAACCACGACGGCGACGGCGACGGC
CGTCTCAACTCCTCCGAGCTCACCGAAGCTTTTCGGTACATCGGTTCCTTTATGCCTTCGTACAGAGCTGGTAAGGCTCTTTCTCACGCCGATTCTAACAAAGAC
GGATTCATCAACGAGGAGGAATTCGAAATGCTCATCAATTATGCTGAAAAACGCAAATACACCGTTGTTTGA
Protein sequenceShow/hide protein sequence
MDPTEDKSKKSKKRSKLSREQLSVIFRNHDGDGDGRLNSSELTEAFRYIGSFMPSYRAGKALSHADSNKDGFINEEEFEMLINYAEKRKYTVV