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CmaCh01G018590 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G018590
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr01:12229382..12229666
RNA-Seq ExpressionCmaCh01G018590
SyntenyCmaCh01G018590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]1.3e-1252.78Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS  A +L+L+S F  NISHTQ  RLLP+E                E  AV  L S P +F H +  A  DV+V GGDFRPTT GHSPGAGH +AP 
Subjt:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1152.43Show/hide
Query:  SAAAVLLVLASIFNYNISHTQGLRLLPMEQEHPAV--------------HLNSRPQSFH--PSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDS
        S     L+L+SI   NISHT G RLLP+  EHP V               L SRP +F    S     D +V GGDFRPTTPGHSPG GH LAP SHVDS
Subjt:  SAAAVLLVLASIFNYNISHTQGLRLLPMEQEHPAV--------------HLNSRPQSFH--PSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDS

Query:  KIH
        KIH
Subjt:  KIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]8.0e-4295.83Show/hide
Query:  MAGINLIS--AAAVLLVLASIFNYNISHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH
        MAGINLIS  AAAVLLVLASIFN NI HTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH
Subjt:  MAGINLIS--AAAVLLVLASIFNYNISHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]3.1e-0943.93Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGL--------RLLPMEQEHPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPDS
        I LIS    +L+L+S F  ++SHTQ          R+   +  HP +        L S P +F       T + +V GGDFRPTTPGHSPGAGH +AP S
Subjt:  INLISAAAVLLVLASIFNYNISHTQGL--------RLLPMEQEHPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPDS

Query:  HVDSKIH
        H+DSKIH
Subjt:  HVDSKIH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]5.4e-1454.63Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS  A +L+L+S F  NISHTQ  RLLPME                E  AV  L S P +F H +  A  DV+V GGDFRPTTPGHSPGAGH +AP 
Subjt:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein1.5e-0943.93Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGL--------RLLPMEQEHPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPDS
        I LIS    +L+L+S F  ++SHTQ          R+   +  HP +        L S P +F       T + +V GGDFRPTTPGHSPGAGH +AP S
Subjt:  INLISAAAVLLVLASIFNYNISHTQGL--------RLLPMEQEHPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPDS

Query:  HVDSKIH
        H+DSKIH
Subjt:  HVDSKIH

A0A5A7VEP2 Uncharacterized protein6.4e-1352.78Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS  A +L+L+S F  NISHTQ  RLLP+E                E  AV  L S P +F H +  A  DV+V GGDFRPTT GHSPGAGH +AP 
Subjt:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

A0A5D3D9H8 Uncharacterized protein2.6e-1454.63Show/hide
Query:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS  A +L+L+S F  NISHTQ  RLLPME                E  AV  L S P +F H +  A  DV+V GGDFRPTTPGHSPGAGH +AP 
Subjt:  INLISAAAVLLVLASIFNYNISHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATTATAACATTTCACACACCCAAGGACTAAGGTTGCTGCCAATGGAGCA
GGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCACCACACCCG
GCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATTATAACATTTCACACACCCAAGGACTAAGGTTGCTGCCAATGGAGCA
GGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCACCACACCCG
GCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATTCATTAG
Protein sequenceShow/hide protein sequence
MAGINLISAAAVLLVLASIFNYNISHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH