; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh01G019460 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G019460
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationCma_Chr01:12608245..12609021
RNA-Seq ExpressionCmaCh01G019460
SyntenyCmaCh01G019460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]2.0e-10384.17Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVG                                      LVFFGVAVYGS
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS

Query:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW--GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRR
        RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW  GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK GRRGGGRR
Subjt:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW--GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRR

Query:  KNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR
        KNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR
Subjt:  KNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-9075.76Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNK                                                       +FFGVAVYGS
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS

Query:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-------GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRR
        RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW       GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK GRR
Subjt:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-------GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRR

Query:  GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR
        GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR
Subjt:  GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]3.7e-5774.87Show/hide
Query:  MGLENGMMFCGLLVFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN--RGGGGGYGWGW----GGGGGGGGGGGGG
        MG EN +     LV     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN   GGGGGYGWGW    GGGGGGGGGGGGG
Subjt:  MGLENGMMFCGLLVFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN--RGGGGGYGWGW----GGGGGGGGGGGGG

Query:  GGGGGWGWGGGGGGWWKWGCGGQPKY---GRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGGGGWGWGGGGGGWWKWGCGG+PK+   GRR   GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGGWGWGGGGGGWWKWGCGGQPKY---GRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]1.7e-5472.77Show/hide
Query:  MGLENGMMFCGLLVFFGVAVYGSRAEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWG-GGGGGGGGGGGGGGGGG
        MG EN +    L++   V      AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN  GGGGGYGWGWG GGGGGGGGGGGGGGGGG
Subjt:  MGLENGMMFCGLLVFFGVAVYGSRAEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWG-GGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKYGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR
        WGWGGGGGGWWKWGCGGQPK  R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  WGWGGGGGGWWKWGCGGQPKYGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]2.2e-9781.25Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGL                                           AVYGS
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS

Query:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRK
        RAEGLKNGTFLTFSELP GNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK GRRGGGRRK
Subjt:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRK

Query:  NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        NVDRKRIYNEEDYS+GEFAECMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHCRR
Subjt:  NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein8.4e-5572.77Show/hide
Query:  MGLENGMMFCGLLVFFGVAVYGSRAEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWG-GGGGGGGGGGGGGGGGG
        MG EN +    L++   V      AEGL NG      TFLTFSELP+ NAGE RNSS N+TTVEVSKQN  GGGGGYGWGWG GGGGGGGGGGGGGGGGG
Subjt:  MGLENGMMFCGLLVFFGVAVYGSRAEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN-RGGGGGYGWGWG-GGGGGGGGGGGGGGGGG

Query:  WGWGGGGGGWWKWGCGGQPKYGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR
        WGWGGGGGGWWKWGCGGQPK  R G     G  +NV  KR+Y+E+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC RR
Subjt:  WGWGGGGGGWWKWGCGGQPKYGRRG----GGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRR

A0A1S3C029 keratin, type II cytoskeletal 11.8e-5774.87Show/hide
Query:  MGLENGMMFCGLLVFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN--RGGGGGYGWGW----GGGGGGGGGGGGG
        MG EN +     LV     +YGSR AEGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN   GGGGGYGWGW    GGGGGGGGGGGGG
Subjt:  MGLENGMMFCGLLVFFGVAVYGSR-AEGLKNG------TFLTFSELPRGNAGEGRNSSGNTTTVEVSKQN--RGGGGGYGWGW----GGGGGGGGGGGGG

Query:  GGGGGWGWGGGGGGWWKWGCGGQPKY---GRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        GGGGGWGWGGGGGGWWKWGCGG+PK+   GRR   GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGGWGWGGGGGGWWKWGCGGQPKY---GRR-GGGRRKNVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

A0A540M1B0 Uncharacterized protein9.0e-3351.36Show/hide
Query:  LLVFFGVAVYGSRAEG--LKNGT--------------FLTFSELPRGNAGEGRN-SSGNTTTVEVSKQ-----------------------NRGGGGGYG
        +L+F   A+ GS A G  L+NGT               L  +E+P    GE RN ++  TT V+++ +                       N GGGGGY 
Subjt:  LLVFFGVAVYGSRAEG--LKNGT--------------FLTFSELPRGNAGEGRN-SSGNTTTVEVSKQ-----------------------NRGGGGGYG

Query:  WGWGGGGGGGGGGGG-----GGGGGGWGWGGGGG--GWWKWGCGGQPKYGRRGGGRRKN----VDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHC
        WGWGGGGGGGGGGGG     GG GGGWGWGGGGG  GWWKWGCGG    G+ G GRR +       KR ++EE+Y +GEFA+CM KGRC+GMRLDCPLHC
Subjt:  WGWGGGGGGGGGGGG-----GGGGGGWGWGGGGG--GWWKWGCGGQPKYGRRGGGRRKN----VDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHC

Query:  GGPCFYDCRYMCKAHCRRRR
        GGPCFYDC++MCKAHCRRRR
Subjt:  GGPCFYDCRYMCKAHCRRRR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like1.0e-9781.25Show/hide
Query:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS
        MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGL                                           AVYGS
Subjt:  MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGS

Query:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRK
        RAEGLKNGTFLTFSELP GNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPK GRRGGGRRK
Subjt:  RAEGLKNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGW-GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRK

Query:  NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        NVDRKRIYNEEDYS+GEFAECMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHCRR
Subjt:  NVDRKRIYNEEDYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

A0A7J7HUV4 Uncharacterized protein3.1e-3369.12Show/hide
Query:  NTTTVEV----SKQNRGGGGG---YGWGW---GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRKNVDRKRIYNEEDYSMGEFAE
        N T V V    +K NRGGGGG   +GWGW   GGGGGGGGGGGGGGGGGGWGWGGGGGGWW WGC    KY     G   ++  KR++N EDY +GEFA+
Subjt:  NTTTVEV----SKQNRGGGGG---YGWGW---GGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRKNVDRKRIYNEEDYSMGEFAE

Query:  CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        CMV+GRCRGMRLDCPLHCGGPCFYDC++MCKAHCRR
Subjt:  CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein1.1e-1952.41Show/hide
Query:  EGRNSSGNTTTVEV-----SKQNRGGGGGYGWGW-----GGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKYGRRGGGRRKNVDRKRIYNEE
        +  N+  N+TT  V      +   GG G Y WGW     GGGGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG    G +G GR             
Subjt:  EGRNSSGNTTTVEV-----SKQNRGGGGGYGWGW-----GGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGQPKYGRRGGGRRKNVDRKRIYNEE

Query:  DYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR
        ++   E+AEC  +G+C G RL+CP HCGG CFYDC ++CK HCRR
Subjt:  DYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAA
AGTAGGATTCAAGCCATCCCATCTGTACTGCACGTTGGTTGGGTTGGGTTGGGTTCGTGGGGTTTCTTCAAGAAAAAGAAGAACGTCCTATATATGGGCTTTCAA
ACAGTACAACCAATGCAAGAAATGGGTTTGGAAAATGGAATGATGTTCTGTGGTTTGTTAGTGTTTTTTGGAGTAGCGGTTTATGGGTCGAGAGCTGAGGGTTTG
AAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCACGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAAC
AGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGTGGTGGAGGTGGAGGGGGTGGAGGAGGAGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGC
GGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATATGGCAGACGCGGCGGTGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAA
GATTATAGTATGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGT
CGATACATGTGCAAGGCTCACTGCCGACGCCGACGCCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACTCGCAAAAGAAGTCGATTTGGTGAATGTGGGCAACAGTGCTTTAGTTAAGCGGTATGGCGTTGTTGATTTTGCAATGCAAGTGGGGGGACAGAACAAA
AGTAGGATTCAAGCCATCCCATCTGTACTGCACGTTGGTTGGGTTGGGTTGGGTTCGTGGGGTTTCTTCAAGAAAAAGAAGAACGTCCTATATATGGGCTTTCAA
ACAGTACAACCAATGCAAGAAATGGGTTTGGAAAATGGAATGATGTTCTGTGGTTTGTTAGTGTTTTTTGGAGTAGCGGTTTATGGGTCGAGAGCTGAGGGTTTG
AAAAATGGCACTTTCTTAACATTCTCCGAGCTGCCACGGGGAAATGCAGGGGAGGGGAGAAACAGTTCTGGTAATACTACTACGGTTGAGGTTAGCAAGCAGAAC
AGGGGAGGAGGCGGTGGGTATGGGTGGGGATGGGGCGGAGGTGGTGGAGGTGGAGGGGGTGGAGGAGGAGGTGGTGGTGGTGGTGGATGGGGATGGGGAGGAGGC
GGAGGTGGGTGGTGGAAATGGGGTTGTGGTGGACAGCCAAAATATGGCAGACGCGGCGGTGGGAGAAGGAAAAATGTAGACAGGAAGAGAATATACAATGAGGAA
GATTATAGTATGGGAGAATTTGCGGAATGTATGGTGAAAGGAAGATGCAGAGGCATGAGATTGGACTGTCCGCTTCACTGCGGCGGGCCTTGCTTTTACGACTGT
CGATACATGTGCAAGGCTCACTGCCGACGCCGACGCCTGTAA
Protein sequenceShow/hide protein sequence
MTLAKEVDLVNVGNSALVKRYGVVDFAMQVGGQNKSRIQAIPSVLHVGWVGLGSWGFFKKKKNVLYMGFQTVQPMQEMGLENGMMFCGLLVFFGVAVYGSRAEGL
KNGTFLTFSELPRGNAGEGRNSSGNTTTVEVSKQNRGGGGGYGWGWGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGQPKYGRRGGGRRKNVDRKRIYNEE
DYSMGEFAECMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCRRRRL