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CmaCh01G019910 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh01G019910
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLYR motif-containing protein 2
Genome locationCma_Chr01:12790275..12792706
RNA-Seq ExpressionCmaCh01G019910
SyntenyCmaCh01G019910
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608613.1 hypothetical protein SDJN03_01955, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2893.67Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
KAG7037930.1 hypothetical protein SDJN02_01562, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2893.67Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
XP_022941069.1 uncharacterized protein LOC111446466 [Cucurbita moschata]2.7e-3095.06Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
XP_022981971.1 uncharacterized protein LOC111480962 [Cucurbita maxima]9.9e-33100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
XP_023524988.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]2.7e-3095.06Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL LDLQEFILRARVLKLYRQALR AQKAPVHAREELR  IRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112189.7e-2681.48Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MV+SLDL EFILRARVLKL+RQALR A+KAPVHAREELR  IRQEMENNR CN++QKVR+L+SEGIE LKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1F8N3 uncharacterized protein LOC1114433214.7e-2887.65Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALR  +KAPVHAREELR  IRQEMENNRGC++RQKVRFLLSEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1FM54 uncharacterized protein LOC1114464661.3e-3095.06Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1IFA5 uncharacterized protein LOC1114764182.0e-2683.95Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL+LDLQEFILRARVLKLYRQALR  +KAPVHAREELR  IRQEMENNR C++RQK+RFLLSEG ERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1IY12 uncharacterized protein LOC1114809624.8e-33100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein2.8e-2568.75Show/hide
Query:  VLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        ++ LDLQ FILRARVLKLYRQAL+IA +APVH R EL+  +RQEME NR CN++QK+R+L+SEG+ER+K L+EMLDMQG+
Subjt:  VLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCAGGCTTTAAGAATTGCTCAAAAAGCTCCTGTCCACGCTCGA
GAGGAATTGAGACTTGCAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTCAGTGAAGGAATAGAGAGATTGAAG
CGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAA
mRNA sequenceShow/hide mRNA sequence
ACTGAACAACAGAAATAGTTAACGTCAGATTGAACCAGAAATGGAATTCACTTCAGTTTGATCCACCGTGGGCTTGACGAACAGGTAGTAGCACCACCTATTTGT
CCTCTCGGAAGAGAATTCGCCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCAGGCTTTAAGAATTGCTCAA
AAAGCTCCTGTCCACGCTCGAGAGGAATTGAGACTTGCAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTCAGT
GAAGGAATAGAGAGATTGAAGCGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAATAATGATTGTCATCACCGACATCATTCAGTATTCTTTTCAAATCTCTG
TTACTTCAGTATGATATTGATACTCAAAGTTGAACATTGTCTTGATGAAATGATTGGATTCTGAAAACAATAATCTACAGCCGTTTGAATTCCTTGCAAAATTTC
AATAACAAAAACAGATCTTTTAATTCCAAAAGCCTGGTCTACATTTTAGTAGAGAACAAAACAAAGAAGCTTAAGAAGAGGTTCAAGAGAACCAAACAGCCCCTT
GTAATTTGTCCCCTCCTAATTTTAAGTATCTAATCTAGGAACCTTTTGCCTTCTAATATTGTCGTAGACAGCTCTCCCAGCCCACGCAATTTGCAGCCTCAGGCC
AATTCACATAGGATCTTAACAAAATCAAAGCAATGACTCCAGCCATACAAACTGCTGGGTGATACTTATAGTTATCAAATGGGGCTTTAACTTCTTCTTGTGTCG
GTCGACACTTTGCCAACGTAACTACAACTTCGAGTATAAAAGAAGCCAGGTACTCTAAAGGGGCCGTGAGGCAAAACCTCTCTCGACCATCTTATCCACCAATTC
CTCGTGCTTCTTCAACTGTCCCGCCTTTCGCAGCTGCTGCAGAACCATCTCATAGATGGGCATGCTGGGCTTTAAGCATTTCTCCTCAATCATTTCCCTGAAGAA
CTTGTAGGCATTGTTCCAATGCCCCATCCCACAATATAACGATATCAGTACTTGGTAAGTATTCAAATTAGGCTCAACTTCTTCTTCTTCCATCTCCTTCTTCAA
CTTGAAAATCATATCAGCAGATTTCGATTCTGCAAACATCCGCATCAAGATATTGTACGTCACTGTATTTGGCTTACAACCCAGATCCTTCATCCTAGCAAACAT
CCTATGAACACCATTTACATCATGCGACTTCGCGATACACCTAAATATGGGATTAAAGGTCGACGCATTCGGGGTACAGCCTTTCTTAGCCATAGAGTTGAGGAC
CTTTGTAGCCTCTCCAAGATTATCATCCTTACAATGAGTCTCAATAAGAAAGTTATAAGTAATTATGTCAGCAGCACAACCCAATCTCTTCATTTGATTGTACAC
TTGCAAAACCTTCTCTGTTCTACCAGCCTTCACGTGGACTCTTATAAGATTGTTGAATGTAACTGAGTTGGGATTGCAACCAGCATCAACCATCTCAGAGAAAAC
ATCATGGGCACGAGTAATTTGGCCACATCTACACAATGCATCAATCACAATGCTGTAAGTATAAACATTAGGGCTAATACCTGCCATCTTCATCTCTTTAAACAC
CCTCTCGGCCTCTGAGATATCACCGGCTCGACACCAGCCATGGACCAGGATTGCAGCCGTAGTCCTCCATGCGATTAAACGCATGAACCGCCTCCGCCGCCAATC
CAGCCCTCACATACCGCCGGACAAGAATCGAGAAGGTCAATCATCTGGTTGTAGG
Protein sequenceShow/hide protein sequence
MVLSLDLQEFILRARVLKLYRQALRIAQKAPVHAREELRLAIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN