; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G001880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G001880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCma_Chr02:860578..861609
RNA-Seq ExpressionCmaCh02G001880
SyntenyCmaCh02G001880
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.0e-17996.79Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY++LPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLEC EYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]2.6e-15987.17Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MK GT   S+FLL FHQFLR  SS+ +I+P+QTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLST PVNF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPR+GT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]1.2e-18097.38Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]9.6e-186100Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]2.1e-18097.38Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRAN EIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.7e-15180.76Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        M +G  +TS+FLL+FH FL   SS+ SI+P+QTLQ+SIKAAVESKSYKKLPDLFPSLQEAC NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGC P PQTH LLSSAWLKQR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PR+GT+ NVVAALR NRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYI+VR +VVEGLAGIGE ELASAVRRRF EL S
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein2.8e-15181.05Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        M +G  +TS+FLL+FH FL  CSS+ SI+P+QTLQ+SIKAAVESKSYKKLP LFPSLQEAC NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGC P PQTH LLSSAWLKQR Q+KSVA+IL+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PR+ T+INVVAALRANRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        M MT++G+IPYI+VR KVVEGL GIGE ELASAVRRRF EL S
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062701.3e-15987.17Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MK GT   S+FLL FHQFLR  SS+ +I+P+QTLQESIKAAVESK YKKLPDLFPSL++ACQNP+PFSFLST PVNF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGC P PQTHLLLSSAWLKQR QSKSVA+ILLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPR+GT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062705.9e-18197.38Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062704.6e-186100Show/hide
Query:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

SwissProt top hitse value%identityAlignment
Q3EDF8 Pentatricopeptide repeat-containing protein At1g099008.9e-0923.71Show/hide
Query:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   ++  L   + K+++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  ++ G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR

Query:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA

Q940A6 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic1.3e-0725.13Show/hide
Query:  LSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP
        L S   K  + SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS     ++  EA   L EM VK  L P
Subjt:  LSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP

Query:  RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVR
           T   ++  L    ++  A++  +  ++        +Y ++++GC +        +    M  K   P   V + ++      G   +A  +R
Subjt:  RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVR

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic4.7e-1023.68Show/hide
Query:  FLRPCSSVPSITPAQ-TLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP
        F++  S+     P Q T    +    ++   K   ++   + +   +P+ +++ S      +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FLRPCSSVPSITPAQ-TLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISS
        +  +  + + +   G  P   T   L    L   R  +    +  +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI  
Subjt:  LPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISS

Query:  STAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVR
             +T EA E+  EM V   ++    T   ++  L  +R +  A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I   
Subjt:  STAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVR

Query:  HKVVEGLAGIGETELASAVRR
          ++ GL   G  E+AS + R
Subjt:  HKVVEGLAGIGETELASAVRR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062702.1e-9857.73Show/hide
Query:  SITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI
        SI+  + ++++IK AVE+K Y ++P+L  SL+E  QN   FSFLS F  + R +V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV
        L SGC P PQTHLLLS AWL++RR S+SVA I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I+S    R+T + V
Subjt:  LHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV

Query:  ELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   Y V FESYE++VEGCLE REYILAGKVVM MT++G+IPYI+VR KVVE L  IG
Subjt:  ELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG

Query:  ETELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  ETELASAVRRRFAELRS

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic1.5e-0825Show/hide
Query:  SLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA
        ++ V +R++  G  P  QT+  L    L +RR   SV  +L +M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI +   
Subjt:  SLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA

Query:  VRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV
         R+   A E+ ++M    +  P R T I ++     NR++    +    +EK+ +     ++ ILV+   +   +  A   +  M ++G +P +   + +
Subjt:  VRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV

Query:  VEGL
        + GL
Subjt:  VEGL

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-9957.73Show/hide
Query:  SITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI
        SI+  + ++++IK AVE+K Y ++P+L  SL+E  QN   FSFLS F  + R +V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV
        L SGC P PQTHLLLS AWL++RR S+SVA I+ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I+S    R+T + V
Subjt:  LHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV

Query:  ELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   Y V FESYE++VEGCLE REYILAGKVVM MT++G+IPYI+VR KVVE L  IG
Subjt:  ELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG

Query:  ETELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  ETELASAVRRRFAELRS

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.3e-1023.71Show/hide
Query:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   ++  L   + K+++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  ++ G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR

Query:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-1123.68Show/hide
Query:  FLRPCSSVPSITPAQ-TLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP
        F++  S+     P Q T    +    ++   K   ++   + +   +P+ +++ S      +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FLRPCSSVPSITPAQ-TLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISS
        +  +  + + +   G  P   T   L    L   R  +    +  +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI  
Subjt:  LPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISS

Query:  STAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVR
             +T EA E+  EM V   ++    T   ++  L  +R +  A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I   
Subjt:  STAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVR

Query:  HKVVEGLAGIGETELASAVRR
          ++ GL   G  E+AS + R
Subjt:  HKVVEGLAGIGETELASAVRR

AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.1e-0925.13Show/hide
Query:  LSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP
        L S   K  + SK++  +     + G+  D+   N L+  LC   +L EAF++ K + G GCV D  SY TLIS     ++  EA   L EM VK  L P
Subjt:  LSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP

Query:  RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVR
           T   ++  L    ++  A++  +  ++        +Y ++++GC +        +    M  K   P   V + ++      G   +A  +R
Subjt:  RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVR

AT4G31850.1 proton gradient regulation 31.1e-0925Show/hide
Query:  SLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA
        ++ V +R++  G  P  QT+  L    L +RR   SV  +L +M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI +   
Subjt:  SLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA

Query:  VRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV
         R+   A E+ ++M    +  P R T I ++     NR++    +    +EK+ +     ++ ILV+   +   +  A   +  M ++G +P +   + +
Subjt:  VRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV

Query:  VEGL
        + GL
Subjt:  VEGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTGGAACTGCAAGGACTTCTTCGTTTTTACTCCATTTCCATCAGTTTTTGCGGCCATGTTCTTCAGTCCCCTCAATAACTCCAGCACAAACGCTTCAA
GAAAGCATTAAAGCTGCAGTTGAGTCAAAGTCGTATAAAAAACTTCCAGATTTGTTTCCTTCTTTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTC
TCTACTTTTCCTGTCAACTTCAGAACACAAGTTGTGGATGAGATACTGCAGTCTTTAATCCCTCTCAGACCTCGCTCAAGGCCACAGTTTGTCCATGCCTCTCTG
CTTTTCTATACTCTTCAAAGCCCTTCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTTTTCCTGTCCCTCAGACCCACCTTCTC
CTCTCTTCTGCATGGCTAAAACAACGTCGTCAGTCTAAGTCTGTTGCTAGCATCTTGTTGGACATGCGGTCAATTGGATATGAGCCTGATAGCAGCATATGTAAT
TATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCTGAGGCATTTCAAGTCTTGAAGGGTATGGGGGGAGCAGGATGCGTCCCTGACTTGGAGAGTTATGGC
ACTTTAATTAGTTCATCAACAGCAGTTAGACGGACAGCTGAGGCAGTGGAACTGCTGAAAGAAATGGTTGTAAAAGTTAAGTTGACACCAAGACGAGGAACGGTC
ATTAACGTTGTGGCTGCATTACGAGCAAACCGAGAGATAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTTACAATGTTGGATTTGAGAGTTAT
GAGATTCTTGTTGAAGGTTGTCTGGAGTGTCGTGAGTATATTTTAGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGGTATATACCATATATCAGGGTCAGG
CATAAGGTTGTTGAGGGGCTGGCTGGTATTGGAGAGACGGAACTGGCATCTGCTGTGAGACGCAGGTTTGCTGAGTTGAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTGGAACTGCAAGGACTTCTTCGTTTTTACTCCATTTCCATCAGTTTTTGCGGCCATGTTCTTCAGTCCCCTCAATAACTCCAGCACAAACGCTTCAA
GAAAGCATTAAAGCTGCAGTTGAGTCAAAGTCGTATAAAAAACTTCCAGATTTGTTTCCTTCTTTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTC
TCTACTTTTCCTGTCAACTTCAGAACACAAGTTGTGGATGAGATACTGCAGTCTTTAATCCCTCTCAGACCTCGCTCAAGGCCACAGTTTGTCCATGCCTCTCTG
CTTTTCTATACTCTTCAAAGCCCTTCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTTTTCCTGTCCCTCAGACCCACCTTCTC
CTCTCTTCTGCATGGCTAAAACAACGTCGTCAGTCTAAGTCTGTTGCTAGCATCTTGTTGGACATGCGGTCAATTGGATATGAGCCTGATAGCAGCATATGTAAT
TATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCTGAGGCATTTCAAGTCTTGAAGGGTATGGGGGGAGCAGGATGCGTCCCTGACTTGGAGAGTTATGGC
ACTTTAATTAGTTCATCAACAGCAGTTAGACGGACAGCTGAGGCAGTGGAACTGCTGAAAGAAATGGTTGTAAAAGTTAAGTTGACACCAAGACGAGGAACGGTC
ATTAACGTTGTGGCTGCATTACGAGCAAACCGAGAGATAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTTACAATGTTGGATTTGAGAGTTAT
GAGATTCTTGTTGAAGGTTGTCTGGAGTGTCGTGAGTATATTTTAGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGGTATATACCATATATCAGGGTCAGG
CATAAGGTTGTTGAGGGGCTGGCTGGTATTGGAGAGACGGAACTGGCATCTGCTGTGAGACGCAGGTTTGCTGAGTTGAGGTCTTAG
Protein sequenceShow/hide protein sequence
MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASL
LFYTLQSPSPLPLSLPVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYG
TLISSSTAVRRTAEAVELLKEMVVKVKLTPRRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVR
HKVVEGLAGIGETELASAVRRRFAELRS