; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G002040 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G002040
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationCma_Chr02:913514..916678
RNA-Seq ExpressionCmaCh02G002040
SyntenyCmaCh02G002040
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]4.9e-9094.83Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSMP V+ Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]8.3e-9094.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]1.4e-8994.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGS+P V+ Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

XP_022947066.1 nuclear cap-binding protein subunit 2-like [Cucurbita moschata]6.0e-96100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

XP_022971080.1 nuclear cap-binding protein subunit 2-like [Cucurbita maxima]6.0e-96100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

TrEMBL top hitse value%identityAlignment
A0A1S3CLT9 Nuclear cap-binding protein subunit 24.0e-9094.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLSVYRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM+Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

A0A6J1G5C4 Nuclear cap-binding protein subunit 22.9e-96100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

A0A6J1I4R2 Nuclear cap-binding protein subunit 22.9e-96100Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

A0A6J1J7C7 Nuclear cap-binding protein subunit 26.9e-9094.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSMP V+ Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

A0A6J1JFW0 Nuclear cap-binding protein subunit 26.9e-9094.25Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSMP V+ Q
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQ

SwissProt top hitse value%identityAlignment
B7P877 Nuclear cap-binding protein subunit 22.9e-5367.38Show/hide
Query:  LSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E  L  STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD GRGGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKEL

Q54KR9 Nuclear cap-binding protein subunit 27.7e-5464.47Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        M+ L+  P     Y D++   TQDEF+HA+  S+T+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+N KTPCGFCFV YYS+ED  D +K+I+G+ L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELE
        D+R IR D+D+GF++GRQ+GRG SGGQVRDEYRTDYDPGRGGYGK  Q E++
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELE

Q84L14 Nuclear cap-binding protein subunit 26.0e-8384.71Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFKDP+KLS YRDRRF GTQ+E+E AL +S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVK+ISGT+L
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPP
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG     + PP
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPP

Q9CQ49 Nuclear cap-binding protein subunit 25.0e-5369.5Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L  S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD GRGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 22.9e-8587.57Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGT SLG+ P
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-0830.39Show/hide
Query:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L +         TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-0830.39Show/hide
Query:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L +         TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHALLS--------STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein7.7e-0934.21Show/hide
Query:  SSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRV
        S +T+YV N+ F  T   ++ LFS  G++ ++ +  D++++   G  FVLY SRED   A + +   IL+ R + V
Subjt:  SSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRV

AT5G44200.1 CAP-binding protein 202.0e-8687.57Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGT SLG+ P
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP

AT5G44200.2 CAP-binding protein 202.0e-8687.57Show/hide
Query:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL
        MASLFK+ +KLS YRDRRF GTQ+EF+ AL +STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGT SLG+ P
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATAATTCCATGGAAAGGGGTGCTTTCCGCCTCTAATCCCTGTTCCTCTGCCTCCTCCTTTTTCCCTTCCGTTTCTCGATCTTCTGGGGTTTCTAGTTGT
AGCGCAGATTTGGTTATTCTAGGGTTCATGGCTTCACTGTTCAAGGACCCATCAAAGCTCTCTGTTTATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTT
GAACATGCACTGCTGTCTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACGACTGAAGAACAAGTTTATGAGCTCTTTTCTCGAGCTGGAGAAATTAAG
AAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTTAAATTTATAAGT
GGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGACAATGGGGCCGTGGTCGAAGTGGTGGGCAGGTGCGTGATGAA
TATCGAACAGACTATGATCCTGGTAGAGGTGGTTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGATTCACTAGGC
TCTATGCCGCCAGTCATGTCTCAGCGTAAGTTGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATAATTCCATGGAAAGGGGTGCTTTCCGCCTCTAATCCCTGTTCCTCTGCCTCCTCCTTTTTCCCTTCCGTTTCTCGATCTTCTGGGGTTTCTAGTTGT
AGCGCAGATTTGGTTATTCTAGGGTTCATGGCTTCACTGTTCAAGGACCCATCAAAGCTCTCTGTTTATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTT
GAACATGCACTGCTGTCTTCAACCACCGTTTATGTGGGAAATATGTCCTTTTATACGACTGAAGAACAAGTTTATGAGCTCTTTTCTCGAGCTGGAGAAATTAAG
AAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTTAAATTTATAAGT
GGAACAATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGACAATGGGGCCGTGGTCGAAGTGGTGGGCAGGTGCGTGATGAA
TATCGAACAGACTATGATCCTGGTAGAGGTGGTTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGATTCACTAGGC
TCTATGCCGCCAGTCATGTCTCAGCGTAAGTTGCTATGA
Protein sequenceShow/hide protein sequence
MGIIPWKGVLSASNPCSSASSFFPSVSRSSGVSSCSADLVILGFMASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEIK
KIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLG
SMPPVMSQRKLL