; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G002500 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G002500
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCma_Chr02:1111457..1113152
RNA-Seq ExpressionCmaCh02G002500
SyntenyCmaCh02G002500
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022970733.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]1.4e-18399.37Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESG+IGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

XP_022970734.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]3.8e-18499.68Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

XP_022970735.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]7.6e-18599.69Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFKNS
        KICDEYELSKKFKEFK S
Subjt:  KICDEYELSKKFKEFKNS

XP_022970736.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]4.2e-18399.37Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQL VTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]6.5e-16890.51Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIV+GPRGDNPLI EVWAYNLD EI+RLD CLL Y VMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDE GNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGI+VRKFAIRFLYT+RKHAI++W+TFHGLYDIGYL+LA+GVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQ YDFNAEICDGFLYGLSKKFEEFVG+Q+HRIYVQI+CA VKAMVI KKML+LF  
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        + C+EYELSKK KEF+
Subjt:  KICDEYELSKKFKEFK

TrEMBL top hitse value%identityAlignment
A0A6J1G7T4 Poly(A)-specific ribonuclease1.7e-16689.24Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIV+GPRGDNPLI EVWAYNLD EI+RLD CLL Y +MSIDTEFPGCIKRTPWGT DEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYT+ KHAI++W+TFHGLYDIGYL+LA+GVVKSLPETLGEF+WIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQ YDF+AEICDGFLYGLSKKFEE VG+Q+HRIYVQI+CA VKAMVI KKML+LF  
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        + C+EYELSKK KEF+
Subjt:  KICDEYELSKKFKEFK

A0A6J1I1E6 putative CCR4-associated factor 1 homolog 82.0e-18399.37Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQL VTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

A0A6J1I3Q4 Poly(A)-specific ribonuclease3.7e-18599.69Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFKNS
        KICDEYELSKKFKEFK S
Subjt:  KICDEYELSKKFKEFKNS

A0A6J1I4S7 Poly(A)-specific ribonuclease6.9e-18499.37Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESG+IGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

A0A6J1I6H7 Poly(A)-specific ribonuclease1.8e-18499.68Show/hide
Query:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
        MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF
Subjt:  MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDF

Query:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
        DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF
Subjt:  DPEIDAHNPASICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARF

Query:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
        CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMT LLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA
Subjt:  CEGLEGGNLGLEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYA

Query:  KICDEYELSKKFKEFK
        KICDEYELSKKFKEFK
Subjt:  KICDEYELSKKFKEFK

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.0e-4341.74Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N   E+  +  CL     ++IDTEFPGC+K TP    DE  Y D +FNV+ T +IQLG+T+  +   I  TWE N SDF+      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGLD  K++++GI + +F + F   +  KH   +W+TF G YD  YL+  L   K LPET  EF+  V + +G  V D+K MA  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKML
          +L  +R G  HHAGSDS +T  +  K++
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKML

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.8e-4141.05Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N + E+  +  CL  +  ++IDTEFPGC+K TP    +E  Y D +FNV+ T +IQLG T+ D  G I  TWE N SDF+      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTMR-KHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGL+  K+ ++GI + +F   F   ++ K     W+ F G YD  YL+  L   K LPET  EF   V + +G  V D+K +A  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTMR-KHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM
          +L  KR G  HHAGSDS +T  +  K+
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.3e-4343.98Show/hide
Query:  LDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDG
        ++ CL  Y  ++IDTEFP  ++ T     DEE Y D  F+V++ K+IQLG+T+ D +G IGGTWE NFSDF  + DA N  SI FL++NGLD  K++++G
Subjt:  LDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDG

Query:  IKVRKFAIRFLYTMRKHAIH-QWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHH
        I++  F     + ++K   +  W+TFHG YDI YL+      ++LP T   F   VAR +G+V DLK MA  CEGL    LGLE L       R G  HH
Subjt:  IKVRKFAIRFLYTMRKHAIH-QWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHH

Query:  AGSDSLMTVLLHEKML
        AGS++ +T ++  K+L
Subjt:  AGSDSLMTVLLHEKML

Q9SFX6 Putative CCR4-associated factor 1 homolog 36.3e-4141.05Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N + E+  +  CL     ++IDTEFPGC+K TP    +E  Y D +FNV+ T +IQLG T+ D  G    TWE N SDFD      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGL+  K++++GI + +F   F   +  K     W+ F G YD  YL+  L   K LPET  EF   V + +G  V D+K +A  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM
          +L  KR G  HHAGSDS +T  +  K+
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 17.4e-5041.9Show/hide
Query:  PLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASI
        PL   VW  N+D+E+ R+  CL  +P+++ DTE+PG I RT + +  +E Y   + NV  TK+IQ G T+ +  G IGG WE NFS+F    D  N  SI
Subjt:  PLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASI

Query:  CFLKQNGLDFGKLKKDGIKVRKFAI--RFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLG
         FL+++GLD  K++ +G+ +  +    + +   R     +++TF G YD  Y +  L   K LPET GEF   V +  G V D K MA FCEGL G +LG
Subjt:  CFLKQNGLDFGKLKKDGIKVRKFAI--RFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLG

Query:  LEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSK
        L KL QLL   R G  HHAGSDSLMT L+  K+  +Y+ ++    G +YG+ K
Subjt:  LEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSK

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.3e-5141.9Show/hide
Query:  PLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASI
        PL   VW  N+D+E+ R+  CL  +P+++ DTE+PG I RT + +  +E Y   + NV  TK+IQ G T+ +  G IGG WE NFS+F    D  N  SI
Subjt:  PLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASI

Query:  CFLKQNGLDFGKLKKDGIKVRKFAI--RFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLG
         FL+++GLD  K++ +G+ +  +    + +   R     +++TF G YD  Y +  L   K LPET GEF   V +  G V D K MA FCEGL G +LG
Subjt:  CFLKQNGLDFGKLKKDGIKVRKFAI--RFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLG

Query:  LEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSK
        L KL QLL   R G  HHAGSDSLMT L+  K+  +Y+ ++    G +YG+ K
Subjt:  LEKLGQLLDQKRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSK

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.5e-4241.05Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N + E+  +  CL     ++IDTEFPGC+K TP    +E  Y D +FNV+ T +IQLG T+ D  G    TWE N SDFD      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGL+  K++++GI + +F   F   +  K     W+ F G YD  YL+  L   K LPET  EF   V + +G  V D+K +A  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM
          +L  KR G  HHAGSDS +T  +  K+
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-4241.05Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N + E+  +  CL  +  ++IDTEFPGC+K TP    +E  Y D +FNV+ T +IQLG T+ D  G I  TWE N SDF+      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTMR-KHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGL+  K+ ++GI + +F   F   ++ K     W+ F G YD  YL+  L   K LPET  EF   V + +G  V D+K +A  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTMR-KHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM
          +L  KR G  HHAGSDS +T  +  K+
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-4441.74Show/hide
Query:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK
        EVW +N   E+  +  CL     ++IDTEFPGC+K TP    DE  Y D +FNV+ T +IQLG+T+  +   I  TWE N SDF+      N  SI FLK
Subjt:  EVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLK

Query:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL
         NGLD  K++++GI + +F + F   +  KH   +W+TF G YD  YL+  L   K LPET  EF+  V + +G  V D+K MA  C GL     GL+++
Subjt:  QNGLDFGKLKKDGIKVRKFAIRFLYTM-RKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGT-VRDLKHMARFCEGLEGGNLGLEKL

Query:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKML
          +L  +R G  HHAGSDS +T  +  K++
Subjt:  GQLLDQKRFGLKHHAGSDSLMTVLLHEKML

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-4443.98Show/hide
Query:  LDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDG
        ++ CL  Y  ++IDTEFP  ++ T     DEE Y D  F+V++ K+IQLG+T+ D +G IGGTWE NFSDF  + DA N  SI FL++NGLD  K++++G
Subjt:  LDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDG

Query:  IKVRKFAIRFLYTMRKHAIH-QWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHH
        I++  F     + ++K   +  W+TFHG YDI YL+      ++LP T   F   VAR +G+V DLK MA  CEGL    LGLE L       R G  HH
Subjt:  IKVRKFAIRFLYTMRKHAIH-QWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQKRFGLKHH

Query:  AGSDSLMTVLLHEKML
        AGS++ +T ++  K+L
Subjt:  AGSDSLMTVLLHEKML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAATTGTTCAAGGTCCGAGAGGAGATAACCCTTTGATTACAGAAGTTTGGGCTTACAATCTCGATGATGAAATCCTTCGGCTCGACCATTGTCTGCTATTGTA
CCCAGTTATGTCAATCGATACTGAATTTCCTGGGTGTATTAAGAGAACTCCTTGGGGCACGATTGATGAAGAACTCTACGCAGATTTTCGATTCAATGTCAACCAAACCA
AAGTGATTCAACTAGGTGTGACAGTTTCTGATGAATCAGGGAACATCGGCGGTACATGGGAGTTTAATTTCTCTGACTTCGATCCTGAAATCGACGCTCATAACCCTGCG
TCCATTTGTTTTCTGAAACAGAACGGCTTGGATTTTGGGAAACTGAAAAAAGATGGAATTAAGGTGAGAAAATTTGCAATAAGATTCTTATATACGATGCGAAAGCATGC
GATACACCAGTGGATTACATTTCACGGATTATACGATATTGGATATCTGATATTGGCGTTGGGCGTGGTTAAAAGCTTGCCGGAAACATTGGGCGAATTCGAATGGATCG
TGGCGAGGAGAGTGGGGACCGTGAGGGATTTAAAGCATATGGCGCGATTCTGCGAAGGGCTTGAAGGGGGGAATTTAGGACTCGAGAAGTTAGGGCAATTGCTGGACCAA
AAACGCTTTGGATTGAAGCATCACGCTGGTTCTGATAGTTTAATGACTGTGCTGCTTCATGAGAAGATGTTGCAACTGTATGATTTCAATGCGGAAATTTGCGATGGGTT
TTTGTATGGGCTGTCGAAGAAATTCGAGGAGTTCGTGGGCATGCAATCACATCGCATATATGTTCAAATTAAGTGTGCGGAAGTGAAAGCTATGGTGATTCGTAAGAAGA
TGTTAAAACTTTTTTATGCGAAAATTTGCGATGAATATGAGCTGTCGAAGAAATTCAAGGAGTTCAAGAATAGTTTTGAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAATTGTTCAAGGTCCGAGAGGAGATAACCCTTTGATTACAGAAGTTTGGGCTTACAATCTCGATGATGAAATCCTTCGGCTCGACCATTGTCTGCTATTGTA
CCCAGTTATGTCAATCGATACTGAATTTCCTGGGTGTATTAAGAGAACTCCTTGGGGCACGATTGATGAAGAACTCTACGCAGATTTTCGATTCAATGTCAACCAAACCA
AAGTGATTCAACTAGGTGTGACAGTTTCTGATGAATCAGGGAACATCGGCGGTACATGGGAGTTTAATTTCTCTGACTTCGATCCTGAAATCGACGCTCATAACCCTGCG
TCCATTTGTTTTCTGAAACAGAACGGCTTGGATTTTGGGAAACTGAAAAAAGATGGAATTAAGGTGAGAAAATTTGCAATAAGATTCTTATATACGATGCGAAAGCATGC
GATACACCAGTGGATTACATTTCACGGATTATACGATATTGGATATCTGATATTGGCGTTGGGCGTGGTTAAAAGCTTGCCGGAAACATTGGGCGAATTCGAATGGATCG
TGGCGAGGAGAGTGGGGACCGTGAGGGATTTAAAGCATATGGCGCGATTCTGCGAAGGGCTTGAAGGGGGGAATTTAGGACTCGAGAAGTTAGGGCAATTGCTGGACCAA
AAACGCTTTGGATTGAAGCATCACGCTGGTTCTGATAGTTTAATGACTGTGCTGCTTCATGAGAAGATGTTGCAACTGTATGATTTCAATGCGGAAATTTGCGATGGGTT
TTTGTATGGGCTGTCGAAGAAATTCGAGGAGTTCGTGGGCATGCAATCACATCGCATATATGTTCAAATTAAGTGTGCGGAAGTGAAAGCTATGGTGATTCGTAAGAAGA
TGTTAAAACTTTTTTATGCGAAAATTTGCGATGAATATGAGCTGTCGAAGAAATTCAAGGAGTTCAAGAATAGTTTTGAAGTGTAA
Protein sequenceShow/hide protein sequence
MDRIVQGPRGDNPLITEVWAYNLDDEILRLDHCLLLYPVMSIDTEFPGCIKRTPWGTIDEELYADFRFNVNQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPA
SICFLKQNGLDFGKLKKDGIKVRKFAIRFLYTMRKHAIHQWITFHGLYDIGYLILALGVVKSLPETLGEFEWIVARRVGTVRDLKHMARFCEGLEGGNLGLEKLGQLLDQ
KRFGLKHHAGSDSLMTVLLHEKMLQLYDFNAEICDGFLYGLSKKFEEFVGMQSHRIYVQIKCAEVKAMVIRKKMLKLFYAKICDEYELSKKFKEFKNSFEV