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CmaCh02G004480 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G004480
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionexpressed protein localized to the inner membrane of the chloroplast.
Genome locationCma_Chr02:2316651..2322330
RNA-Seq ExpressionCmaCh02G004480
SyntenyCmaCh02G004480
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010970.1 hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-6885.9Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAA F+PSLSVSGGLIKASDLSSKSISFG APKL++Q KC +TNHKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TP+VPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

XP_022948116.1 uncharacterized protein LOC111451792 [Cucurbita moschata]3.0e-7898.72Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAA FSPSLS+SGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

XP_023007535.1 uncharacterized protein LOC111499995 [Cucurbita maxima]1.6e-79100Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

XP_023512433.1 uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]3.7e-6886.54Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAA F+PSLSVSGGLIKASDLSSKSISFG  PKL++Q KC +TNHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

XP_023534610.1 uncharacterized protein LOC111796133 [Cucurbita pepo subsp. pepo]3.3e-7797.44Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAA F+PSLS+SGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTP VPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

TrEMBL top hitse value%identityAlignment
A0A6J1D647 uncharacterized protein LOC1110172731.5e-6788.46Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAA F+PSLSVSGGLIKASDLSSKSI+FG APKL++Q KC +TN KLSVRAEYND GR GGGDFVAGFLLGGAVFGTLAY+FAPQIRRSLLNE+EYGF+R
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        AKRPIYYDEGLEKTR+TLNAKIGQLNSAIDNVSSRLRGG NTPAVPVEADPE EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1FVP6 uncharacterized protein LOC1114488975.2e-6885.9Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAA F+PSLSVSGGLIKASDLSSKSISFG APKL++Q KC +T+HKLSVRAEYNDGGR+GGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1G8D5 uncharacterized protein LOC1114517921.5e-7898.72Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAA FSPSLS+SGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

A0A6J1JGK4 uncharacterized protein LOC1114843148.9e-6885.9Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR
        MAA  +PSLSVSGGLIKASDLSSKSISFG APKL++Q KC ++NHKLSVRAEYNDGGRSGGG+FVAGFLLGGAVFGTLAY+FAPQIRRS+LNE+EYGF+R
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQ-KCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKR

Query:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
        A+RPIYYD+GLEKTR+TLN KIGQLNSAIDNVSSRLRGG  TPAVPVEADPE+EAT
Subjt:  AKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

A0A6J1L384 uncharacterized protein LOC1114999957.7e-80100Show/hide
Query:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
        MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA
Subjt:  MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
        KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.1.2e-1639.35Show/hide
Query:  SPSLSVSGGLIKASDLSSKSISFG--HAPKLSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKR
        S  L  S G     +    S+SFG  H+ KL +    +T   L++++ Y D   SG  G FV GF+LGG + G L  V+APQI +++   +     R   
Subjt:  SPSLSVSGGLIKASDLSSKSISFG--HAPKLSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKR

Query:  PIYYDE--GLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT
           YDE   LEKTR+ L  KI QLNSAID+VSS+L+  ++TP     +  E+EAT
Subjt:  PIYYDE--GLEKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEAT

AT3G02900.1 unknown protein7.7e-4066.92Show/hide
Query:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS
        L+VQ     +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+ENEYGFK+ ++P+YYDEGLE+ RE LN KIGQLNSAID VS
Subjt:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS

Query:  SRLRGG-----KNT--PAVPVEADPEVEAT
        SRL+GG     KNT  P+VPVE D E EAT
Subjt:  SRLRGG-----KNT--PAVPVEADPEVEAT

AT3G02900.2 unknown protein7.7e-4066.92Show/hide
Query:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS
        L+VQ     +HKLSV A Y  G + GG  DFV GFLLG AVFGTLAY+FAPQIRRS+L+ENEYGFK+ ++P+YYDEGLE+ RE LN KIGQLNSAID VS
Subjt:  LSVQKCFKTNHKLSVRAEYNDGGRSGG-GDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGLEKTRETLNAKIGQLNSAIDNVS

Query:  SRLRGG-----KNT--PAVPVEADPEVEAT
        SRL+GG     KNT  P+VPVE D E EAT
Subjt:  SRLRGG-----KNT--PAVPVEADPEVEAT

AT5G16660.1 unknown protein1.1e-4163.92Show/hide
Query:  LSVSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-ENEYGFKRA
        LS+SG      +KA+ LS  +K  S      L++ K      K SV A Y DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN E+EYGF++ 
Subjt:  LSVSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-ENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT
        K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE DPEVEAT
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT

AT5G16660.2 unknown protein1.7e-3963.29Show/hide
Query:  LSVSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-ENEYGFKRA
        LS+SG      +KA+ LS  +K  S      L++ K      K SV A   DG RSG  GDF+AGFLLGGAVFG +AY+FAPQIRRS+LN E+EYGF++ 
Subjt:  LSVSG----GLIKASDLS--SKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSG-GGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLN-ENEYGFKRA

Query:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT
        K+P YYDEGLEKTRETLN KIGQLNSAIDNVSSRLRG  KNT +  VPVE DPEVEAT
Subjt:  KRPIYYDEGLEKTRETLNAKIGQLNSAIDNVSSRLRG-GKNTPA--VPVEADPEVEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCCGCTTTTCTCCCTCGCTGTCCGTGTCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCA
GAAGTGCTTCAAAACCAACCACAAGTTATCAGTACGTGCTGAGTACAATGATGGTGGTAGAAGCGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTAT
TTGGAACCTTAGCTTACGTTTTCGCACCGCAGATCAGGAGATCTCTTCTAAATGAAAATGAATACGGTTTTAAGAGGGCAAAGCGTCCAATCTACTATGATGAAGGTTTA
GAGAAAACCAGAGAGACGTTGAATGCAAAAATAGGCCAATTGAATTCTGCCATTGATAATGTATCTTCACGTCTGAGAGGTGGAAAGAACACTCCAGCTGTGCCAGTTGA
AGCTGATCCTGAGGTTGAAGCTACCTTTTAA
mRNA sequenceShow/hide mRNA sequence
GAACAATGAGGCGATTATCTCCAACACTTTCTTCTCCTGCTCCTCCTTCTTCCTCTCTCTCTAGATCTCTACCCTTCTTCTTCCAACCACATGGCTGCCCGCTTTTCTCC
CTCGCTGTCCGTGTCTGGGGGATTGATCAAGGCCTCAGATCTCTCCTCTAAGTCCATTTCCTTTGGGCATGCACCAAAACTCTCAGTTCAGAAGTGCTTCAAAACCAACC
ACAAGTTATCAGTACGTGCTGAGTACAATGATGGTGGTAGAAGCGGAGGTGGGGATTTTGTTGCTGGGTTTCTTCTTGGGGGTGCTGTATTTGGAACCTTAGCTTACGTT
TTCGCACCGCAGATCAGGAGATCTCTTCTAAATGAAAATGAATACGGTTTTAAGAGGGCAAAGCGTCCAATCTACTATGATGAAGGTTTAGAGAAAACCAGAGAGACGTT
GAATGCAAAAATAGGCCAATTGAATTCTGCCATTGATAATGTATCTTCACGTCTGAGAGGTGGAAAGAACACTCCAGCTGTGCCAGTTGAAGCTGATCCTGAGGTTGAAG
CTACCTTTTAAATTCTGCTTAAACATGGACTGCTCAAGGTTTGAAGTTTGTACATCTTAGACACCATATCATCTCATGTGACAATTTGCCTCAATTTTTATTTCAAAGTT
TTTTGTATTTGATCAAAATGAGAATTGGATGTTGCAGTTTCATTGTTGGAACTATCTTTAAGGTTATATATTACCACTTTTTAGAACTTTTTAAATCACTACTGAATTCC
AAGGTAGTTTTTGTTGTCCATATTTATGTTCATAACCTTTTATTTGTGAGTTTAATATTAATATAAGAACATAGTCTAAATAGCCAAATTTTGGCATA
Protein sequenceShow/hide protein sequence
MAARFSPSLSVSGGLIKASDLSSKSISFGHAPKLSVQKCFKTNHKLSVRAEYNDGGRSGGGDFVAGFLLGGAVFGTLAYVFAPQIRRSLLNENEYGFKRAKRPIYYDEGL
EKTRETLNAKIGQLNSAIDNVSSRLRGGKNTPAVPVEADPEVEATF