; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G004630 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G004630
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionbinding partner of ACD11 1-like
Genome locationCma_Chr02:2427854..2429986
RNA-Seq ExpressionCmaCh02G004630
SyntenyCmaCh02G004630
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035145.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-11592.28Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLS-----------GATIVDQPVSIATAPDYNLPAVPAS
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLS           GATIVDQPVSIA+APDY+LPAVPA+
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLS-----------GATIVDQPVSIATAPDYNLPAVPAS

Query:  APLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_022947210.1 binding partner of ACD11 1-like [Cucurbita moschata]7.3e-11997.58Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPVSIA+APDY+LPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023007523.1 binding partner of ACD11 1-like [Cucurbita maxima]1.9e-122100Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]3.9e-12098.39Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPVSIA+APDY+LPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.2e-10084.68Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENA
        +RTVRVTNVSLS +EKDLRDFFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLSGATIVDQPVSIA+APDYNLPAV ASAP  +PVS+P+ +N 
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENA

Query:  GSG--TAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
         SG  TAGSAMQKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A
Subjt:  GSG--TAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        +M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVL EDQ K  G S
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein4.1e-9984.34Show/hide
Query:  RTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENAG
        RTVRVTNVSLSA+EKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI++APDYNLPAV ASAP  +PVS+P+ +N  
Subjt:  RTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENAG

Query:  S---GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        S    TAGSAMQKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A
Subjt:  S---GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        +M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X11.2e-9884.68Show/hide
Query:  RTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENAG
        RTVRVTNVSLSA+EKDLRDFFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI++APDYNLPAV ASAP  +PVS+P+ +N  
Subjt:  RTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAP--LPVSSPSAENAG

Query:  S--GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTAL
        S   TAGSA+QK EDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+AL
Subjt:  S--GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTAL

Query:  MANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        MANRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  MANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A6J1G681 binding partner of ACD11 1-like3.5e-11997.58Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPVSIA+APDY+LPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X23.8e-9780.48Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAG-
        +RTVRVTNVSL A+EK+LR+FFSFSGEIEFVEMRKDNE+ Q+AFVTFKD KGAETSILLSGATIVDQP+SI +APDYNLPAV AS P   S+P+AEN G 
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAG-

Query:  --------SGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVN
                +GT GSAMQKAEDVVSSMLAKGF LGKD LNRAKSFD++HQLT TASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAVN
Subjt:  --------SGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVN

Query:  NAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG
        NAG+A+M NRYVSTGASWV+QTFQRVAKAAV+VS KTKEK+LAEDQ  + G
Subjt:  NAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG

A0A6J1L7W4 binding partner of ACD11 1-like9.0e-123100Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

SwissProt top hitse value%identityAlignment
P87216 Protein vip12.3e-0627.96Show/hide
Query:  VRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTA
        V VTN+S   +EK + DFFSF G++  +   K  E +Q A + F+     +T++LL  A +    + I T+ D              ++ + +  G+G  
Subjt:  VRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTA

Query:  GSAMQKAED---VVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK
         +A Q+ +    ++S +L++G+ L   TL ++   DQ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  GSAMQKAED---VVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 11.0e-5955.2Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S +QKAEDVVSSMLAKGF LGKD + +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6556.68Show/hide
Query:  TVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGT
        TV+V+NVSL A+++DL++FFSFSG+I ++E + + ER+++A+VTFKD +GAET++LLSGATIVD  V ++ APDY L     ++  P  S  +  AG   
Subjt:  TVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGT

Query:  AGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT
          S ++KAEDVVSSMLAKGF LGKD + +AKS D+KHQLTSTAS+KV S D+KIG ++KI+ GT VV EKV+E+D+K+QVSEKTK+A       V+NAG+
Subjt:  AGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT

Query:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
        A+M NRYV TGA+WVT  F +VAKAA EV  K KEKV +AE++ K++
Subjt:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE

AT5G16840.1 binding partner of acd11 17.4e-6155.2Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S +QKAEDVVSSMLAKGF LGKD + +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.2 binding partner of acd11 13.0e-6255.2Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E ++++  NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S +QKAEDVVSSMLAKGF LGKD + +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.3 binding partner of acd11 16.9e-5954.47Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGS
        VR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+Y+ PA          +P AE   S
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGS

Query:  GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------AVNNA
        G A S +QKAEDVVSSMLAKGF LGKD + +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        V++A
Subjt:  GTAGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------AVNNA

Query:  GTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        G+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  GTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.2e-6453.85Show/hide
Query:  TVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGT
        TV+V+NVSL A+E+DL++FFSFSG+I ++E + +N+ S++A+VTFKD +GAET++LL+G+TIVD  V++  +PDY LP    ++   +   +  ++ +  
Subjt:  TVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGT

Query:  AGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT
          S  +KAEDVVS M++KGF LGKD + +AKS D+KHQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+KFQV+EKTK+A       V+NAG+
Subjt:  AGSAMQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT

Query:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
        A+M NRYV TGA+WVT  F RV+KAA EV  K KEKV LAE++ +++
Subjt:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAAT
GCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCAGAAAGGAGCCGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTA
GCATTGCTACTGCTCCAGATTACAATCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCATCTGCAGAGAACGCAGGCTCTGGTACTGCTGGATCTGCA
ATGCAAAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCTAAAGGCTTCACTTTGGGCAAAGATACCCTCAATAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATC
AACAGCCTCATCGAAAGTCCTTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGACAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGT
TTCAAGTGTCTGAGAAAACCAAGGCTGCGGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGA
GTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCTAAACAAGAGGGAAGATCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTTCTTTTGCCATCTGTATTATTTGCGAACCTAAACAACCGCCAAGCCACAACGCACCTCTCAAGGTCATTCTTCCTCTGTCTCTCTCTCTCTCTCTCTCTCGAAGAAC
TTGGATTTGAAACTTCTCCGGTGGATCAGACGGAGCAGCATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGA
CTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCAGAAAGGAGCCGAGACATCGA
TTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTAGCATTGCTACTGCTCCAGATTACAATCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCA
TCTGCAGAGAACGCAGGCTCTGGTACTGCTGGATCTGCAATGCAAAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCTAAAGGCTTCACTTTGGGCAAAGATACCCTCAA
TAGGGCAAAGTCTTTTGACCAGAAGCACCAATTGACATCAACAGCCTCATCGAAAGTCCTTTCTCTGGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCGTTGGCACGA
CAGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCTGCGGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTC
TCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGAGTCGCAAAAGCGGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCTAAACA
AGAGGGAAGATCTTAATTCATCCAAGAATCGCTGCAAGTCCAAACTTGTGTAGCCCTGATCATACCCCAACATATATATCACATGTATTTGGCCAAAACAATGTGAGGAG
TGAGGACCTATTCTTCTTAGCTTGCTATTTTCATCTCGGTTGATTGACATATTTTCAATGCCTTGTTTTAGTTTTTTGTATCAGGGAGTACATAAATAAGCTACATGCTT
ATGTTGTAATTCAACCGTAAGAAAAACATATATGCTATGTGATTAAGTGTCCAGAAATGATCTTTATAAACATTATTTGCATA
Protein sequenceShow/hide protein sequence
MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLSGATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTAGSA
MQKAEDVVSSMLAKGFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQR
VAKAAVEVSHKTKEKVLAEDQAKQEGRS