| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 5.0e-276 | 98.23 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRC+PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_022947612.1 RNA polymerase sigma factor sigA-like [Cucurbita moschata] | 8.9e-273 | 97.24 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRC+PSEEQLAISLEIS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023006851.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 4.9e-279 | 99.21 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 8.6e-276 | 98.03 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQLKP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRC+PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 3.5e-261 | 93.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY+ NDHRLGQ QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL-NDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEE KTRL+ C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 3.3e-257 | 92.14 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRL+ C+PSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 3.3e-257 | 92.14 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRH-VQCIKAVKEHVDTPSSPTAEPWLHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKG
Query: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRL+ C+PSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 1.2e-251 | 89.76 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LY NDHRLGQ+QVS TK VVIAK SA+FSPS+ SNRH QCIKAVKEHVDTPSSPT EPWL N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQL+ ISPELLQ RL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRL+ C+PSE+QLAISL+ISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 4.3e-273 | 97.24 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTK VVIAKHSADFSPSY PSNRHVQCIKAVKEHVDTPSSPTAEPWL+NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRRM+SKRKIQSKHVFMAQPKISKQ KP+ISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRC+PSEEQLAISLEIS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 2.4e-279 | 99.21 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGL
Query: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEEILPHSEVVRLSKKIKVGLALEEHKT RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEEILPHSEVVRLSKKIKVGLALEEHKT----RLRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 7.8e-187 | 68.6 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TK + AK ++++SPS+ SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL+ C+PS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKMRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKMRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 6.0e-38 | 34.19 | Show/hide |
Query: QNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTR----LRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
++ +R Y++ + +L E + L++KI L LE + R L DP + + A ++++ R R+ A++K+ SN+RLV+SIA++Y N G
Subjt: QNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTR----LRCDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGA
Query: EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMSKKKV----K
DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+ +K+ K
Subjt: EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMSKKKV----K
Query: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+ T EEI + ++RER
Subjt: NATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEISKRIGLSRER
Query: VRQVGLVALEKLK
+RQ+ AL KL+
Subjt: VRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 3.5e-38 | 34.16 | Show/hide |
Query: KPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRL--RCD--PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSI
K + ++ +R Y++ + +L E + L+++I LALE + L + D PS+ + A +++ E R R+ A++K+ SN+RLV+SI
Subjt: KPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRL--RCD--PSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSI
Query: AQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMS
A++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ + IA + M+
Subjt: AQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSIDRIAESLNMS
Query: KKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEIS
+K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+ T EEI
Subjt: KKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDN-ECLTWEEIS
Query: KRIGLSRERVRQVGLVALEKLK
+ ++RER+RQ+ AL KL+
Subjt: KRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 3.1e-127 | 50.28 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVD-----
M AT A+IGL A RLL++S +D + L + +T K +A H SP + Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYL---------------NDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVD-----
Query: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWLHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
Query: KISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R R Y++G VS+E+L H +VV LS KIK G+ L++ +++L+ +PS +QLA SL+IS ELRSR+ E LARE L MSN+
Subjt: KISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+I+ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKMRKMEAML
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| Q31QG5 RNA polymerase sigma factor SigA3 | 1.0e-37 | 33.01 | Show/hide |
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLRC-----DPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+R Y++ + +L H E V L K+++ + L+E + L+ DPS+ + A + +S ELR + A+ K+ +N+RLV+S+A++Y ++
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLRC-----DPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAI
DL+Q G IG+ RG+EKFD +KG++ STY YWWIRQ ++RA+ E +RT+RLP H+ E+L I+ + +L Q+ G T ++ +A +L+++ +V++ E
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAI
Query: SKVFSLDREAFPSLNGLPGETHHSYIADNRLENN---PWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGL
SLD G+ + + D LE + P T ++ ++++L++ L +++R++I L +GL D + +T I R+ +SRERVRQ+
Subjt: SKVFSLDREAFPSLNGLPGETHHSYIADNRLENN---PWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGL
Query: VALEKLKKA
AL L++A
Subjt: VALEKLKKA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 7.0e-34 | 31.65 | Show/hide |
Query: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLKPNISPELLQNRLRGYVKGLV-SEEILPHSEVVRLSKKIKVGLALEEHKTRLR---
E++ V+ + S RQ ++R + P + S + K ++ E+ N Y++ S ++L E LS I+ L LE +T L
Subjt: EKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI----SKQLKPNISPELLQNRLRGYVKGLV-SEEILPHSEVVRLSKKIKVGLALEEHKTRLR---
Query: -CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD++KGFK STY +WWI+Q V ++L +
Subjt: -CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVE
Query: NSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++ + N P E IAD + D I
Subjt: NSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWI-
Query: --LKIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
++ +++K+++ +L RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK + ++ L+
Subjt: --LKIEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKMEAMLL
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| AT1G64860.1 sigma factor A | 5.5e-188 | 68.6 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TK + AK ++++SPS+ SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL+ C+PS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKMRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKMRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 1.3e-173 | 67.43 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L +NDH Q +++TK + AK ++++SPS+ SNRH Q KA+KE VD S T +PWL N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYLNDHRLGQNQVSTTKGVVIAKHSADFSPSYSPSNRHVQCIKAVKEHVDTPSSPTAEPWLHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRR+ +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNR
Query: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
+RGYVKG++SE++L H EVVRLSKKIK GL L++HK+RL+ C+PS+EQLA+SL+ISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPSIDRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.0e-32 | 29.94 | Show/hide |
Query: ARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISR
A+ RR + + + K+ K + + L+ ++ G ++++L E L I+ L LE+ KT+L C+P+ + A ++ IS
Subjt: ARQRRMSSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLR----CDPSEEQLAISLEISR
Query: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
L+S + +REKL +N+RLV+ IA++Y N G DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG
Subjt: AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGL
Query: IRNA-KVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDRER
+ A K +QE PS + +A + +S +K+ S+ + + + T D+ +E P +++ V L+N+ L +ER
Subjt: IRNA-KVKLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDRER
Query: EIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
II+L G+D + + EI + GLS+ERVRQ+ AL +LK+
Subjt: EIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALEKLKK
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| AT5G13730.1 sigma factor 4 | 1.2e-33 | 32.37 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLRCDPSEEQLAISLEISRAELRSRVMEC
S KR+ + + + ++ + + N E + V G L E V+L +K G LE T + E +++ L R + + E
Subjt: SSKRKIQSKHVFMAQPKISKQLKPNISPELLQNRLRGYVKGLVSEEILPHSEVVRLSKKIKVGLALEEHKTRLRCDPSEEQLAISLEISRAELRSRVMEC
Query: ----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV
AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E + A
Subjt: ----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV
Query: KLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLY
L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE ++ LY
Subjt: KLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKIEVNKLINMTLEDREREIIRLY
Query: HGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
GL+ E +++EEI K + LSRERVRQ+ +AL+KL+ + ++
Subjt: HGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKKAAKMRKME
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