; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G006100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G006100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionupstream activation factor subunit UAF30-like
Genome locationCma_Chr02:3661137..3669769
RNA-Seq ExpressionCmaCh02G006100
SyntenyCmaCh02G006100
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947277.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita moschata]1.8e-16796.39Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEED+SIDLSDKKQFIREQVDLFLHTEHQRVDEEDGG C EVDQEDGDDNSKMEEEDG S DGDNY+DD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D KSKTGSNE+GKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSD SEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDY+KQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_022947278.1 upstream activation factor subunit UAF30-like isoform X2 [Cucurbita moschata]1.3e-16596.08Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEED+SIDLSDKKQFIREQVDLFLHTEHQRVDEEDGG C EVDQEDGDDNSKMEEEDG S DGDNY+DD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D KSKTGSNE+GKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGK EDSD SEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDY+KQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_023007205.1 upstream activation factor subunit UAF30-like isoform X1 [Cucurbita maxima]3.6e-176100Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_023007206.1 upstream activation factor subunit UAF30-like isoform X2 [Cucurbita maxima]2.6e-17499.7Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGK EDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

XP_023532389.1 upstream activation factor subunit UAF30-like [Cucurbita pepo subsp. pepo]2.6e-16695.78Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEED+SIDLSDKK+FIREQVDLFLHTEHQR+DEEDGG CDEVDQEDGDDNSKMEEEDG S DGDNYDDD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D KSKTGSNE+GKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIW LE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGK EDSD SEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDY+KQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

TrEMBL top hitse value%identityAlignment
A0A1S3C766 upstream activation factor subunit UAF30-like2.4e-14184.08Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELI RLR+ LRNSDLNTTTTAIVRRKLEED+ IDLSDKK+FIREQVDLFL TEH++  EE  G C+EV+QEDGD+N KME EDG SEDGDN D+D
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D K KT S+    + KKRGGGFSKLCSLSPQLQEFIG  EMARTEVVKQLWNHIRE NLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQK----KKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDK
        SNDV PAKSSQKEKQQKEK  K    KKR+KQGKEEDSD S RE KRQKKGKSGFLAPL LSDALV FLGTGE+AL RS+VVKRMWDYIKQNNLQDPSDK
Subjt:  SNDVTPAKSSQKEKQQKEKPQK----KKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDK

Query:  RRIICDEKLKELFDVDSFNGFTVSKLLATHFVK
        RRIICDE+LKELFDVDSFNGFTVSKLLATHF+K
Subjt:  RRIICDEKLKELFDVDSFNGFTVSKLLATHFVK

A0A6J1G606 upstream activation factor subunit UAF30-like isoform X18.7e-16896.39Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEED+SIDLSDKKQFIREQVDLFLHTEHQRVDEEDGG C EVDQEDGDDNSKMEEEDG S DGDNY+DD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D KSKTGSNE+GKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSD SEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDY+KQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1G661 upstream activation factor subunit UAF30-like isoform X26.2e-16696.08Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEED+SIDLSDKKQFIREQVDLFLHTEHQRVDEEDGG C EVDQEDGDDNSKMEEEDG S DGDNY+DD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        D KSKTGSNE+GKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEP KALFGVNSI+MFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGK EDSD SEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDY+KQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1KZW6 upstream activation factor subunit UAF30-like isoform X21.3e-17499.7Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGK EDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

A0A6J1L2C3 upstream activation factor subunit UAF30-like isoform X11.7e-176100Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
        DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLE

Query:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
        SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII
Subjt:  SNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRII

Query:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
Subjt:  CDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp278.8e-0828.05Show/hide
Query:  LRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNE
        ++++L   D  T +   VR+ LEE   +DLS  K+ +   + L    E     E++        Q            + G+E+G        K K    E
Subjt:  LRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNE

Query:  IGKEVKKR---GGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPA
         GK  + +       +K   LSP+L EF+G+ +++R + VK+LW +I+  +LQDP+++R ILCD+ LK++F V++++MF MNK L+  +  +  +D  P 
Subjt:  IGKEVKKR---GGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPA

Query:  KSSQKEKQQKEKPQKKKRRKQ
           + E+        K+  K+
Subjt:  KSSQKEKQQKEKPQKKKRRKQ

Q05024 Protein TRI11.8e-1342.71Show/hide
Query:  LSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQKK
        LS  LQ+F+G  E+ RT+VVK +W +I+E +LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++        P +  + E++QK+ P+K+
Subjt:  LSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQKK

Q08747 Upstream activation factor subunit UAF302.9e-1131.92Show/hide
Query:  LLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNEIGK
        LL + DL T TT  VR  L+E Y+ID+  + + I + +   L    +R   E     +++ +E+     ++ +E   S+     + +D ++K      G 
Subjt:  LLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNEIGK

Query:  EVKKRGGGFSK------LCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPA
         V+K+ G  SK        +LS  L   +G  E+ RTEVV++LW +I+  NLQ+P+N++ ILCDE L+ + G  S NMF+M+K L+ H+   E   ++  
Subjt:  EVKKRGGGFSK------LCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPA

Query:  KSSQKEKQQKEKP
            +E ++KEKP
Subjt:  KSSQKEKQQKEKP

Q9P7S3 SWI/SNF and RSC complexes subunit ssr31.5e-0442.11Show/hide
Query:  QLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVD
        +LS A    LG  E   +R ++V  +W YIK + LQD  +KR I CD+ L++LF+ D
Subjt:  QLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVD

Q9SD34 Zinc finger CCCH domain-containing protein 445.3e-0536.11Show/hide
Query:  VTFLGTGE-NALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVKKTK
        V+F+  G+ + LS+ +V   + DYIK+ NL+DP  K +++CD+ L +LF       F + KLL +H + + K
Subjt:  VTFLGTGE-NALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVKKTK

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein7.7e-6846.82Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD
        MVSDS+L+++LRE+LR+SDL TTT A VRR+LE  + ++L+DKK F+REQ+D FL        E D     + +QE+ D N    +E+G   D D     
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDD

Query:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL-
                 E+  + KKRGGGF+K+C LSPQL++F+G  ++ARTEVVK++W +IRE +LQDP+NRRNILCDE L +LF V +INMFQMNKAL+KHIW L 
Subjt:  DGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPL-

Query:  ---------ESNDVTPAKSSQKEKQQK-EKPQKKKRRKQGKEEDSDGSEREVKRQKKGKS---------GFLAPLQLSDALVTFLGTGENALSRSEVVKR
                 +  DV      + EK  K E+  +    +  +EED    +R+ K++K  KS         GF     LS  L  F GT +  L+R+EVVK 
Subjt:  ---------ESNDVTPAKSSQKEKQQK-EKPQKKKRRKQGKEEDSDGSEREVKRQKKGKS---------GFLAPLQLSDALVTFLGTGENALSRSEVVKR

Query:  MWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATH
        +W YIK+NNLQDPSDKR IICDE L+ LF V+S N F ++K LA H
Subjt:  MWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATH

AT2G14880.1 SWIB/MDM2 domain superfamily protein4.2e-1338.71Show/hide
Query:  SKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH
        S T S+E     K+   G  K   +SP++Q+ + +PE+ART+ +K++W +I+E +LQDP N+R ILCDE LK +F G + +   ++ K +  H
Subjt:  SKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALF-GVNSINMFQMNKALSKH

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.1e-1347.56Show/hide
Query:  SGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGF-TVSKLLATHFVK
        +G L  + +S  L  F+  GEN +SR+  VK++W+YIK NNLQ+P +KR I+CDE+LK +F      GF  +SKLL+ HF K
Subjt:  SGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGF-TVSKLLATHFVK

AT3G19080.1 SWIB complex BAF60b domain-containing protein3.8e-6739.7Show/hide
Query:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHT--------EHQRVDE--------------------EDGGGCDE
        MVSD +L++RLRE+L +SDLNT T A VRR+LE D+ +DL+DKK +IR+Q+D FL +        E  +V+E                     DG G +E
Subjt:  MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHT--------EHQRVDE--------------------EDGGGCDE

Query:  VDQE------------------------------------------------------------------------------------------DGD---
          +E                                                                                          DGD   
Subjt:  VDQE------------------------------------------------------------------------------------------DGD---

Query:  DNSKMEEEDGGSEDGD-----------NYDDDD----------GKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKN
        ++ K E+ED  SE  D           N +++            K K  +  + K  +K GGGF+K+CSLSP+LQ F GV E+ARTEVVK LW +I+E N
Subjt:  DNSKMEEEDGGSEDGD-----------NYDDDD----------GKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKN

Query:  LQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLS
        LQDP+++R+I+CDE  ++LF V SINMFQMNK L+KHIWPLE N    A  S   K  K   QK        E D D SE   ++ KK K   LAPL LS
Subjt:  LQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLS

Query:  DALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVK
        DALV FLG GEN+LSR++VVKR+W+YI  N+LQDPSDKRR+ICDEKLKELF+VDSF   +VSKLL  HF+K
Subjt:  DALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVK

AT4G22360.1 SWIB complex BAF60b domain-containing protein4.6e-3635.44Show/hide
Query:  GKSKTGSNEIGKE-----VKKRG--GGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSK
        G +    N+  KE      K++G  GG +K+C +SP+L+  +G P + RTE+V+QLW +IR+ NLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+K
Subjt:  GKSKTGSNEIGKE-----VKKRG--GGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSK

Query:  HIWPLESNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPS
        HI PL+     P+K S + K+ K + + K                    +    +   + + LS+ L  F GTGE  ++  E+++R+W+YIK NNL+DP 
Subjt:  HIWPLESNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQDPS

Query:  DKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVKKT
        +   I CDEKL++L   +S +   ++++L  H  K++
Subjt:  DKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVKKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCCTTCTTCCTCCCCCAATCTCCCATCTGTTTCTTCACCCCAAGTATTTTTCCTCTTGCATTGCAACCCACCACACTCCGCGGAGGCTCTGCCATCAACTC
CGCCACCACCACCACCACCTCCTCCTCCTCCTCCATTTTTTTCTCTTTCAATCTTTGCCTTTTTCCTCTTATTCCATTCAGATTGTGGCTTCCAACAATGGTTTCCGACT
CGGAGCTCATCAGCCGGCTCCGGGAGTTGCTTCGGAATTCCGACCTCAATACCACTACCACTGCTATCGTCCGCCGGAAGCTCGAGGAGGATTATTCCATTGATTTGTCC
GATAAGAAGCAGTTTATTAGGGAACAGGTCGACTTGTTCCTCCACACTGAGCACCAGAGAGTTGATGAAGAAGATGGCGGCGGCTGCGACGAAGTCGACCAGGAGGATGG
AGATGATAACTCGAAGATGGAAGAGGAGGATGGAGGTAGTGAAGACGGAGATAACTACGACGACGATGACGGAAAGAGTAAAACGGGTTCTAACGAGATTGGTAAAGAGG
TGAAGAAAAGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTCTCCCCACAACTACAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGG
AACCACATTAGAGAGAAGAATTTGCAAGACCCCAGTAATAGGAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAAT
GAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGACGTTACTCCAGCCAAATCAAGTCAGAAGGAAAAGCAGCAAAAGGAGAAGCCACAAAAGAAGAAGA
GGCGGAAGCAAGGAAAAGAAGAAGATTCTGATGGCTCTGAGAGAGAGGTGAAGCGGCAAAAGAAAGGAAAATCTGGTTTCCTTGCTCCTCTTCAACTTTCAGATGCTCTG
GTGACATTTCTTGGTACAGGAGAGAATGCATTGTCTCGCTCTGAAGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAATCTTCAGGATCCTTCTGACAAAAGGAG
AATAATCTGTGATGAGAAGCTTAAAGAACTGTTCGATGTCGATTCGTTTAACGGCTTCACTGTGTCGAAACTGTTGGCCACTCATTTTGTAAAAAAGACGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCCTTCTTCCTCCCCCAATCTCCCATCTGTTTCTTCACCCCAAGTATTTTTCCTCTTGCATTGCAACCCACCACACTCCGCGGAGGCTCTGCCATCAACTC
CGCCACCACCACCACCACCTCCTCCTCCTCCTCCATTTTTTTCTCTTTCAATCTTTGCCTTTTTCCTCTTATTCCATTCAGATTGTGGCTTCCAACAATGGTTTCCGACT
CGGAGCTCATCAGCCGGCTCCGGGAGTTGCTTCGGAATTCCGACCTCAATACCACTACCACTGCTATCGTCCGCCGGAAGCTCGAGGAGGATTATTCCATTGATTTGTCC
GATAAGAAGCAGTTTATTAGGGAACAGGTCGACTTGTTCCTCCACACTGAGCACCAGAGAGTTGATGAAGAAGATGGCGGCGGCTGCGACGAAGTCGACCAGGAGGATGG
AGATGATAACTCGAAGATGGAAGAGGAGGATGGAGGTAGTGAAGACGGAGATAACTACGACGACGATGACGGAAAGAGTAAAACGGGTTCTAACGAGATTGGTAAAGAGG
TGAAGAAAAGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTCTCCCCACAACTACAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGG
AACCACATTAGAGAGAAGAATTTGCAAGACCCCAGTAATAGGAGAAATATTCTCTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAAT
GAATAAAGCTCTATCAAAGCATATTTGGCCGTTGGAATCAAATGACGTTACTCCAGCCAAATCAAGTCAGAAGGAAAAGCAGCAAAAGGAGAAGCCACAAAAGAAGAAGA
GGCGGAAGCAAGGAAAAGAAGAAGATTCTGATGGCTCTGAGAGAGAGGTGAAGCGGCAAAAGAAAGGAAAATCTGGTTTCCTTGCTCCTCTTCAACTTTCAGATGCTCTG
GTGACATTTCTTGGTACAGGAGAGAATGCATTGTCTCGCTCTGAAGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAATCTTCAGGATCCTTCTGACAAAAGGAG
AATAATCTGTGATGAGAAGCTTAAAGAACTGTTCGATGTCGATTCGTTTAACGGCTTCACTGTGTCGAAACTGTTGGCCACTCATTTTGTAAAAAAGACGAAATAGTGAG
TTTCTCCCACATTGTCTTCGTTGATGCAAGAGAATCTGGAATTTTGGTTGAGATAAAGCTTTAGTCGCCTCTTCTTTCTGTGTAATTCTCTGGGATTCACCAACAAGGCA
ATGGAAAATGGGCTTTACTGACCTGGTATAAGTTTCTGACCGTTGGTGGGTGCTATGTTACAGAATCCTCTCTTCAGAATCAAATGGACTAACCATATCTAATCTTCTAT
ACCTTCTCTTAGCTTTCAAGCAGCAGCTTAAGTTAATTATAAAAGAAATTGTGAGCTTTAGTTTGTGCAAATATGAAAATTTTCCATATGTTTGTCAACATTTGTTTTGT
AATTATTCAGTCATTGTTTTTTCTTCTATACTTGGAATATTCATTTAAGTATGATTCACAATTTAAGGGTA
Protein sequenceShow/hide protein sequence
MPSSFFLPQSPICFFTPSIFPLALQPTTLRGGSAINSATTTTTSSSSSIFFSFNLCLFPLIPFRLWLPTMVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLS
DKKQFIREQVDLFLHTEHQRVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNEIGKEVKKRGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLW
NHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQKKKRRKQGKEEDSDGSEREVKRQKKGKSGFLAPLQLSDAL
VTFLGTGENALSRSEVVKRMWDYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVKKTK