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CmaCh02G006260 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G006260
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationCma_Chr02:3774158..3775968
RNA-Seq ExpressionCmaCh02G006260
SyntenyCmaCh02G006260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571348.1 hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2873.4Show/hide
Query:  KAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF
        +AIM R+DRKSSIE EPRTLKM+QIQFAREAALYV+NT+S+EEA++IFTEGLEA ECKAI D D S M+N  HE+E DELP  Y+L DIV+APF
Subjt:  KAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF

KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4198.89Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPS YRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF

XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]5.3e-4198.89Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECK IEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF

XP_023512402.1 uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo]3.3e-2774.73Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF
        M R+DRKSSIE EPRTLKM+QIQFAREAALYV+NT+S+EEA++IFTEGLEAVECKAI D D S M+N  HE+E DELP  Y+L DIV+APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSS-MQNCCHEEEVDELPSFYRLPDIVSAPF

XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]2.3e-2877.78Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTL+MHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECKAI+D+DS M N  HEEE DEL S Y+  DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein2.7e-2776.09Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTLKMHQIQFAREAALYV+NT++IEEAM+IFTEGL+ VECKAI ED+DS ++N  H+EE+DE L  FY+L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI-EDRDSSMQNCCHEEEVDE-LPSFYRLPDIVSAPF

A0A1S3CDH2 uncharacterized protein LOC1034996383.6e-2775Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI--EDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        M  IDRKSSIENEPRTLKM+QIQFAREAALYV+NT++IEEAM+IFTEGL+ VECKAI  ED+DS M+N  H+EE+DEL  F +L DIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAI--EDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF

A0A498HZX3 Uncharacterized protein1.2e-1457.61Show/hide
Query:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLP----DIVSAPF
        RIDRK SIE EPRTL M QI+FAREAA YV+NT ++EEAMRIFTEGLE V     +  D  M     E E  E   +YR P    +IVSAPF
Subjt:  RIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLP----DIVSAPF

A0A6J1DBC1 uncharacterized protein LOC1110189152.0e-2569.89Show/hide
Query:  IMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDR--DSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        IM RIDRKSSIENEPRTLKMHQIQFAREAALY++NT++I+EAMRIFTEGLE VECKA  DR  +   +   +EEE+ +L   YR  DIVSAPF
Subjt:  IMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDR--DSSMQNCCHEEEVDELPSFYRLPDIVSAPF

A0A6J1G887 uncharacterized protein LOC1114516482.5e-4198.89Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
        MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECK IEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPSFYRLPDIVSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein1.5e-0940.62Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT+       +A E+R     N   EE+ D+       +  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF

AT4G33467.2 unknown protein3.3e-0942Show/hide
Query:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF
        M+ ++R+SSIE EP TL + Q++ ARE ALYV+ T ++EEAM IFT    EGL     +A E+R     N   EE+ D+       +  P   DI +APF
Subjt:  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFT----EGLEAVECKAIEDRDSSMQNCCHEEEVDELPS---FYRLP---DIVSAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGTCTTCATAAATGGAACGCCACGTCCCAACGATTATCAAGCTCAACCTCAAGCTCAAAGAGCTCAATCTGTGTTGGTGAAAGAAGATCGAAAGGCAATA
ATGGAAAGAATCGACAGAAAGTCATCCATTGAGAACGAGCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACA
AGCAGCATAGAAGAAGCAATGAGGATTTTCACAGAGGGATTAGAAGCAGTGGAGTGTAAAGCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAA
GAAGAAGTTGATGAGTTACCATCTTTTTATCGGCTTCCAGACATTGTTTCTGCCCCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGTCTTCATAAATGGAACGCCACGTCCCAACGATTATCAAGCTCAACCTCAAGCTCAAAGAGCTCAATCTGTGTTGGTGAAAGAAGATCGAAAGGCAATA
ATGGAAAGAATCGACAGAAAGTCATCCATTGAGAACGAGCCAAGAACTCTCAAAATGCACCAAATCCAATTTGCAAGAGAAGCAGCTCTGTATGTGATAAACACA
AGCAGCATAGAAGAAGCAATGAGGATTTTCACAGAGGGATTAGAAGCAGTGGAGTGTAAAGCGATTGAAGATAGAGATTCAAGCATGCAAAATTGCTGCCATGAA
GAAGAAGTTGATGAGTTACCATCTTTTTATCGGCTTCCAGACATTGTTTCTGCCCCTTTTTAGGTCACTTTTTTTTATAAAAAAATCATAGTTTTTGTAAATAAA
CATATGATATGTATACTTCTAAGGTCTCATGGATGGAGTTTTGAGTTTCAACCATCCTCATCCACCTTTAATCTTTTTACTTCTTCTCAATATATATATATATAT
ATATTTCCTCATTTTCTCTGATTTCAAGACTATCCCGAG
Protein sequenceShow/hide protein sequence
MLVFINGTPRPNDYQAQPQAQRAQSVLVKEDRKAIMERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKAIEDRDSSMQNCCHE
EEVDELPSFYRLPDIVSAPF