; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G007120 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G007120
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCma_Chr02:4312150..4313270
RNA-Seq ExpressionCmaCh02G007120
SyntenyCmaCh02G007120
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0010951 - negative regulation of endopeptidase activity (biological process)
GO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005615 - extracellular space (cellular component)
GO:0004867 - serine-type endopeptidase inhibitor activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022946898.1 uncharacterized protein LOC111450836 [Cucurbita moschata]7.3e-1380Show/hide
Query:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        MY HGH E+ LIVGVYV++LII+ GDMEVLGRFKREMSKNFKMSD G+LS
Subjt:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
XP_022949259.1 probable pectinesterase/pectinesterase inhibitor 21 [Cucurbita moschata]3.1e-1181.4Show/hide
Query:  MDGCSGSPDEMNDMLAHSRWHDRMSYDGLRYPETRDGAKTYGP
        MDGCSGS DEM DM AHSRWHDR SYDG R+PETR G KTYGP
Subjt:  MDGCSGSPDEMNDMLAHSRWHDRMSYDGLRYPETRDGAKTYGP
XP_022956268.1 uncharacterized protein LOC111458020 [Cucurbita moschata]1.1e-1180Show/hide
Query:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        MY  GHGE+ LIVGVYV+DLII+R +MEVL RFKREMSK FKMSDLGVLS
Subjt:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
XP_023006810.1 histidine-rich glycoprotein-like [Cucurbita maxima]2.4e-2463.48Show/hide
Query:  MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR-RNQHRHEGQDRLVEGPGRAPGLNLKVRVSEG-IWACGSR-V
        MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR    H  EG+   +     +  LN++V+ S   I  C S   
Subjt:  MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR-RNQHRHEGQDRLVEGPGRAPGLNLKVRVSEG-IWACGSR-V

Query:  KTVPDDTGVPVLHPS
        K + D  G+   +PS
Subjt:  KTVPDDTGVPVLHPS
XP_023521510.1 uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo]2.1e-1278Show/hide
Query:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        MY H H E+ LI+GVYV+DLII+ GDMEVLGRFKREMSKNFKMSDLG+L+
Subjt:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
TrEMBL top hitse value%identityAlignment
A0A6J1EPA1 uncharacterized protein LOC1114365224.3e-1180.85Show/hide
Query:  HGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        HGHGE+ LIVGVYV+DLII  GDM+VLG FKREMSKNFKMS+LGV S
Subjt:  HGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
A0A6J1G533 uncharacterized protein LOC1114508363.5e-1380Show/hide
Query:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        MY HGH E+ LIVGVYV++LII+ GDMEVLGRFKREMSKNFKMSD G+LS
Subjt:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
A0A6J1GCB8 Pectinesterase1.5e-1181.4Show/hide
Query:  MDGCSGSPDEMNDMLAHSRWHDRMSYDGLRYPETRDGAKTYGP
        MDGCSGS DEM DM AHSRWHDR SYDG R+PETR G KTYGP
Subjt:  MDGCSGSPDEMNDMLAHSRWHDRMSYDGLRYPETRDGAKTYGP
A0A6J1GWC2 uncharacterized protein LOC1114580205.1e-1280Show/hide
Query:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
        MY  GHGE+ LIVGVYV+DLII+R +MEVL RFKREMSK FKMSDLGVLS
Subjt:  MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLS
A0A6J1L173 histidine-rich glycoprotein-like1.2e-2463.48Show/hide
Query:  MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR-RNQHRHEGQDRLVEGPGRAPGLNLKVRVSEG-IWACGSR-V
        MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR    H  EG+   +     +  LN++V+ S   I  C S   
Subjt:  MHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIR-RNQHRHEGQDRLVEGPGRAPGLNLKVRVSEG-IWACGSR-V

Query:  KTVPDDTGVPVLHPS
        K + D  G+   +PS
Subjt:  KTVPDDTGVPVLHPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACATGCACGGGCATGGCGAGGAGGGGCTGATTGTGGGAGTGTACGTCAACGACCTCATAATCTCTAGAGGGGACATGGAAGTTCTTGGAAGATTCAAGAGGGAGAT
GTCAAAGAACTTCAAGATGAGCGATCTCGGTGTGCTTAGTGTCACAATCTGCAATATGATTGTGATTCGAAGAAATCAGCATAGACATGAAGGACAAGATAGGCTTGTTG
AAGGGCCAGGTAGGGCCCCGGGCCTTAACCTCAAAGTCAGGGTTTCGGAAGGGATTTGGGCATGTGGTTCGAGAGTTAAGACAGTACCGGACGACACGGGTGTGCCGGTA
TTGCACCCTAGCCCATGTGTTGGAGGTTGCTACATACACCCGCTATCCGGGACGGTATCTGTAAATGACTCGGCATGGGCACGGGAAGACCTATGCCTCGATAGAACCCA
GATGGATGGATGTTCGGGAAGTCCCGATGAGATGAACGACATGCTGGCCCATTCTCGATGGCATGATCGAATGAGTTATGATGGCCTACGATATCCCGAGACTCGGGATG
GCGCCAAGACATATGGACCCTATCGATGGGGATCGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACATGCACGGGCATGGCGAGGAGGGGCTGATTGTGGGAGTGTACGTCAACGACCTCATAATCTCTAGAGGGGACATGGAAGTTCTTGGAAGATTCAAGAGGGAGAT
GTCAAAGAACTTCAAGATGAGCGATCTCGGTGTGCTTAGTGTCACAATCTGCAATATGATTGTGATTCGAAGAAATCAGCATAGACATGAAGGACAAGATAGGCTTGTTG
AAGGGCCAGGTAGGGCCCCGGGCCTTAACCTCAAAGTCAGGGTTTCGGAAGGGATTTGGGCATGTGGTTCGAGAGTTAAGACAGTACCGGACGACACGGGTGTGCCGGTA
TTGCACCCTAGCCCATGTGTTGGAGGTTGCTACATACACCCGCTATCCGGGACGGTATCTGTAAATGACTCGGCATGGGCACGGGAAGACCTATGCCTCGATAGAACCCA
GATGGATGGATGTTCGGGAAGTCCCGATGAGATGAACGACATGCTGGCCCATTCTCGATGGCATGATCGAATGAGTTATGATGGCCTACGATATCCCGAGACTCGGGATG
GCGCCAAGACATATGGACCCTATCGATGGGGATCGAGATGA
Protein sequenceShow/hide protein sequence
MYMHGHGEEGLIVGVYVNDLIISRGDMEVLGRFKREMSKNFKMSDLGVLSVTICNMIVIRRNQHRHEGQDRLVEGPGRAPGLNLKVRVSEGIWACGSRVKTVPDDTGVPV
LHPSPCVGGCYIHPLSGTVSVNDSAWAREDLCLDRTQMDGCSGSPDEMNDMLAHSRWHDRMSYDGLRYPETRDGAKTYGPYRWGSR