; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G007430 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G007430
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein ELF4-LIKE 1-like
Genome locationCma_Chr02:4511155..4511993
RNA-Seq ExpressionCmaCh02G007430
SyntenyCmaCh02G007430
Gene Ontology termsGO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035362.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2692.11Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        MKNK  KSDE D SDDGDLEAEECDMEV NMLRKSFRQVQSVLEHNRL+IQQVNENQQSRISDNLVNNISLIHEIN
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

XP_015873796.1 protein EARLY FLOWERING 4-like [Ziziphus jujuba]1.8e-1155.84Show/hide
Query:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEAS
        +KR + +     D+ + E E+CDMEV   LRKSFRQVQSVL+ NR +IQQ N+N QSR+ DNLV N+ LI +IN AS
Subjt:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEAS

XP_022948227.1 protein EARLY FLOWERING 4-like [Cucurbita moschata]8.7e-2784.52Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVE
        MKNK  KSDE D  DDGDLE EECDMEV NMLRKSF QVQSVLEHNRL+IQQVNENQQSRIS+NLVNNISLIHEINEA  YGV+
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVE

XP_023006797.1 protein ELF4-LIKE 1-like [Cucurbita maxima]2.1e-36100Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ
        MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ

XP_023532325.1 protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo]5.4e-2996.05Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        MKNKRPKSDERD SDDGDLEAEECDMEV NMLRKSFRQVQSVLEHNRL+IQQVNENQQSRISDNLVNNISLIHEIN
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

TrEMBL top hitse value%identityAlignment
A0A1Q3BF09 DUF1313 domain-containing protein (Fragment)1.9e-1156.41Show/hide
Query:  KNKRPKSDERDTSDDGDL---EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        K  + KS+  D + D D+   E EECD+EV + L K+F+QVQ+VL+HNR++IQQVNEN QSR  DNLV N+ LI EIN
Subjt:  KNKRPKSDERDTSDDGDL---EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

A0A438G1X7 Protein early flowering 49.4e-1164.62Show/hide
Query:  DTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        +  DD D + E CD EV   L +SF QVQSVL+ NRL+IQQVNENQQSRI DNLV N+SL  EIN
Subjt:  DTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

A0A6J1G8L9 protein EARLY FLOWERING 4-like4.2e-2784.52Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVE
        MKNK  KSDE D  DDGDLE EECDMEV NMLRKSF QVQSVLEHNRL+IQQVNENQQSRIS+NLVNNISLIHEINEA  YGV+
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVE

A0A6J1KWT2 protein ELF4-LIKE 1-like9.9e-37100Show/hide
Query:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ
        MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ
Subjt:  MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ

A0A6P3ZJM3 protein EARLY FLOWERING 4-like8.5e-1255.84Show/hide
Query:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEAS
        +KR + +     D+ + E E+CDMEV   LRKSFRQVQSVL+ NR +IQQ N+N QSR+ DNLV N+ LI +IN AS
Subjt:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEAS

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 41.6e-0760Show/hide
Query:  LRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        L ++FRQVQSVL+ NR +IQQVN+N QSR++DN+  N++LI E+N
Subjt:  LRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

O80877 Protein ELF4-LIKE 12.3e-0643.37Show/hide
Query:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEI
        N+ P+ +E D  D     A E D+EV + L   F++ Q  L+ NR +IQ+VNEN  SRI DN+  N+ LI+EIN   S  +EI
Subjt:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEI

Q570U6 Protein ELF4-LIKE 41.6e-0441.27Show/hide
Query:  DMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG
        D ++    +KSF  VQ +L+ NRL+I ++N+N +S+  DNL  N+ LI E+N      AS YG
Subjt:  DMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG

Q8S8F5 Protein ELF4-LIKE 36.1e-0746.3Show/hide
Query:  ECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        + D ++     KSF QVQ++L+HNRL+I ++N+N +S+I DNL  N+ LI E+N
Subjt:  ECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

Q94BS8 Protein ELF4-LIKE 27.4e-0539.71Show/hide
Query:  EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG
        E  + D ++    +KSF QVQ +L+ NRL+I ++N+N +S+ +D+L  N+ LI E+N      AS YG
Subjt:  EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 41.2e-0541.27Show/hide
Query:  DMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG
        D ++    +KSF  VQ +L+ NRL+I ++N+N +S+  DNL  N+ LI E+N      AS YG
Subjt:  DMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG

AT1G72630.1 ELF4-like 25.3e-0639.71Show/hide
Query:  EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG
        E  + D ++    +KSF QVQ +L+ NRL+I ++N+N +S+ +D+L  N+ LI E+N      AS YG
Subjt:  EAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINE-----ASSYG

AT2G06255.1 ELF4-like 34.3e-0846.3Show/hide
Query:  ECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        + D ++     KSF QVQ++L+HNRL+I ++N+N +S+I DNL  N+ LI E+N
Subjt:  ECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN

AT2G29950.1 ELF4-like 11.6e-0743.37Show/hide
Query:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEI
        N+ P+ +E D  D     A E D+EV + L   F++ Q  L+ NR +IQ+VNEN  SRI DN+  N+ LI+EIN   S  +EI
Subjt:  NKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEI

AT2G40080.1 Protein of unknown function (DUF1313)1.1e-0860Show/hide
Query:  LRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN
        L ++FRQVQSVL+ NR +IQQVN+N QSR++DN+  N++LI E+N
Subjt:  LRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATACAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCCGGAATATGCTTAGGAAGAGC
TTCCGTCAGGTGCAGTCCGTATTGGAACATAATCGTTTGATAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACAACATCTCG
CTGATCCATGAAATTAATGAGGCGTCGAGTTACGGAGTCGAAATCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTTGAGAGAGCTCCCCCGCGAATCGGGTCGGAGGAATGAATTGTGTTCTTCGTTTTTCTTCTTCTCTTCGATCCATAGACGGATACGGAAGATCTGCAAGAGCT
TCAGTTCCATGAAGAACAAACGGCCTAAGTCAGATGAGCGAGATACAAGCGACGACGGTGATTTAGAGGCGGAGGAATGCGATATGGAGGTCCGGAATATGCTTA
GGAAGAGCTTCCGTCAGGTGCAGTCCGTATTGGAACATAATCGTTTGATAATCCAGCAGGTGAACGAGAATCAGCAGTCGAGGATCTCCGATAATCTGGTCAACA
ACATCTCGCTGATCCATGAAATTAATGAGGCGTCGAGTTACGGAGTCGAAATCCAGTGAAAACAATGGATGCGGAGGAACTAAGGCGGAAATTCTCAGTAATTCT
GTTTTTCCTTGCCGTGAAAAGTAAAGTAATACTATGGTAGGTAGAGATGTTGAATGATGAAAGTCCCACATTGGCTAATTTAGAAATGATCGGGTTTATAAACAA
AGAATAGTATCTCCATATTGGTATGAGGCCTTTTGAGAAAGCCCAAAGCAAAGCAACAAGAGCTTTATCATACCATTGTAGAGAGTCGTATTCATCTAACTATCA
GAACTTATGCTCAAAGTGGACAATATCATACCATTGTGGAAAGTCGTGTTCATCTAACATGGTATCAGAGTCATTTGTCTAACACGAGACTTTTGAAAAGTTTGA
TAGTGTGCAAAAATAATGGATCCTCTTTGAGGACAA
Protein sequenceShow/hide protein sequence
MKNKRPKSDERDTSDDGDLEAEECDMEVRNMLRKSFRQVQSVLEHNRLIIQQVNENQQSRISDNLVNNISLIHEINEASSYGVEIQ