; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G007960 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G007960
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRab5-interacting
Genome locationCma_Chr02:4719212..4721956
RNA-Seq ExpressionCmaCh02G007960
SyntenyCmaCh02G007960
Gene Ontology termsNA
InterPro domainsIPR010742 - Rab5-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605452.1 hypothetical protein SDJN03_02769, partial [Cucurbita argyrosperma subsp. sororia]2.3e-9994.92Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVSN
        MKEANPVKFNLHQHQEHQ GHLAPFKLAKLFDPEASWDKEL CLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVSN
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVSN

Query:  VSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLASERYVLIDFRSPFCCRHSSMA
        VSCAFQISEYSI+LKV MQ NLALLMSFLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLASE+YV+IDF+SPF CRHSSMA
Subjt:  VSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLASERYVLIDFRSPFCCRHSSMA
XP_022947917.1 uncharacterized protein C20orf24-like isoform X1 [Cucurbita moschata]1.1e-2950Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL    L S
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
XP_023007370.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]2.6e-2951.46Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
                                  + FLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
XP_023532323.1 uncharacterized protein C20orf24-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-2950Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL    L S
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
XP_023532324.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita pepo subsp. pepo]3.3e-2950.88Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
TrEMBL top hitse value%identityAlignment
A0A1S4E4J0 uncharacterized protein C20orf24 homolog6.8e-2849.12Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEA PVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDK +L  ++ +    + +VL     ++ +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
A0A6J1D489 uncharacterized protein C20orf24 homolog5.2e-2849.43Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEA PVKFNLHQHQEHQNGHLAPFKLAKLFD EASWDK +L  ++ +    + +VL     ++ +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTL
                                  + FL ISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL   TL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTL
A0A6J1G7Q9 uncharacterized protein C20orf24-like isoform X15.5e-3050Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL    L S
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLAS
A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X21.6e-2950.88Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
                                  + FLAISTS+VYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
A0A6J1L2S3 uncharacterized protein C20orf24 homolog1.2e-2951.46Show/hide
Query:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK +L  ++ +    + +VL      + +                     VG   F       
Subjt:  MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDK-ELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
                                  + FLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29020.1 Rab5-interacting family protein3.1e-1735.06Show/hide
Query:  MKEANPVKFNLHQHQE----HQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRH
        MKE    K +  Q Q     HQN HL  F  AKLFD EASWDK+                        +G                           W  
Subjt:  MKEANPVKFNLHQHQE----HQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRH

Query:  MVSNVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
         V  + C        +   +        L+ FLAIS+ IVYGYYA++LK+DEE+FGGH ALLQ+GLFAS++LFL
Subjt:  MVSNVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
AT5G59410.1 Rab5-interacting family protein1.2e-2140.35Show/hide
Query:  MKEANPVKFN-LHQHQEHQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS
        MKE+   K N L Q + HQN HL+P KLAKLFDP+ASWDK+           L  VL +    + +                     +    +G   +V 
Subjt:  MKEANPVKFN-LHQHQEHQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVS

Query:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
         +                       ++ FLAIS+ IVYGYYAMILKVDEE+FGGH ALLQEGLFAS+TLFL
Subjt:  NVSCAFQISEYSISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAGCGAATCCGGTTAAGTTCAATCTTCACCAGCATCAAGAGCACCAGAATGGTCACTTGGCCCCGTTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCTCCTG
GGACAAGGAATTGTGTTGCCTTATTGCATTTTGCACCGGACCTTTGAATCTCGTTCTTAGTTTCCGTTTATCAACTTTGTCAATAGGATCAGCTAGGAGATGTTTTGCAC
TGGATTCGACAAGCAGTGGCCGTTGTACTCGGGCTGCTGTGGGGCGCCATACCTTTGGTTGGAGGCATATGGTTTCTAATGTAAGTTGTGCATTCCAAATTTCTGAGTAC
TCCATTTCTCTGAAGGTACTTATGCAAGACAATTTGGCATTACTGATGAGTTTCTTGGCAATATCGACCAGCATAGTATATGGATACTATGCAATGATTTTAAAAGTTGA
TGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGGCTTTTTGCTTCTATAACTCTCTTTCTGAGCAGGAAAACTCTAGCATCTGAACGATATGTCTTGATAG
ATTTTCGATCTCCATTTTGTTGTCGACATTCTTCCATGGCCACAGTGATAGACTAA
mRNA sequenceShow/hide mRNA sequence
TCGTGATAAACTCGAAGCTGAAGAAACCAGACATTATTGTTCTTGCGTTTGCAGAAGCGTTTGACTACTAATGGATCCTGCAATTTGAAGTTGATTCTTCCTTGAAAACC
CTAGGAGTACTGTGCCTATTGGAGGATTTTATCTGCGCGTTTGCCGGAATTTAGATCTCAACTTACTGTAGATCATTTGGTTATCCGAAAAGTGGTTTGATTGGATTGCC
CGGTATGAAAGAAGCGAATCCGGTTAAGTTCAATCTTCACCAGCATCAAGAGCACCAGAATGGTCACTTGGCCCCGTTCAAGCTCGCTAAATTGTTCGATCCAGAGGCCT
CCTGGGACAAGGAATTGTGTTGCCTTATTGCATTTTGCACCGGACCTTTGAATCTCGTTCTTAGTTTCCGTTTATCAACTTTGTCAATAGGATCAGCTAGGAGATGTTTT
GCACTGGATTCGACAAGCAGTGGCCGTTGTACTCGGGCTGCTGTGGGGCGCCATACCTTTGGTTGGAGGCATATGGTTTCTAATGTAAGTTGTGCATTCCAAATTTCTGA
GTACTCCATTTCTCTGAAGGTACTTATGCAAGACAATTTGGCATTACTGATGAGTTTCTTGGCAATATCGACCAGCATAGTATATGGATACTATGCAATGATTTTAAAAG
TTGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGGCTTTTTGCTTCTATAACTCTCTTTCTGAGCAGGAAAACTCTAGCATCTGAACGATATGTCTTG
ATAGATTTTCGATCTCCATTTTGTTGTCGACATTCTTCCATGGCCACAGTGATAGACTAAGGATGTAATCCTTGTTTAATTAACACCTTATATTGGGATCATTTAAATAG
CTAGGTGCTTGAGCTTGAAGTTGAGAGATTGACAATGTTGTGTACATTTGATGATGATTGGATAGGCTCCTCATTTTCTCAATGGCTTCTTTTATCCTGCACCAACCTAA
GATAACCCAGCAAGCACTTTATTGGTGCGGATTAAGGTTTTTTCAGCTGAAATAAGCTTGCGAAAGATTGCTGTCGCATTACATGATTGGAACTTCAGATTATAAATGAC
TAAACTGTGGGGAACGAAGAAAAAGCTTCTTTTCCTTTCTTTCTTCTCTGTTTTTTAGGAAAAGAGGGACGGACAGGCTGCTAACTGACAGGACACAACATCGTGAATAC
TACAGGGAGACCAGGGAAGTGGGAGATTAGAATCTTTGTTGGTTTTTTGTTACTGACTTTTGTCTGTTAAATTGTCCTTATAGAACAGAATCACTGTTGGGTCTATGCTG
TATGTGCAATATTATTGGTGATGGATCGTTTTTCATGTCTACAAAAGGTAACATGTTAGACCCATCCTCTTGTATTCCATCTCTAGTTAGTTTTCTTTATTTAAAATCTT
CTTTAGGCCTACAGTATTATTTGCTGAATTTCGATTGAAATTTTTTGTGATAGATTAATGAAGTATAC
Protein sequenceShow/hide protein sequence
MKEANPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKELCCLIAFCTGPLNLVLSFRLSTLSIGSARRCFALDSTSSGRCTRAAVGRHTFGWRHMVSNVSCAFQISEY
SISLKVLMQDNLALLMSFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFLSRKTLASERYVLIDFRSPFCCRHSSMATVID