; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G008100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G008100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCma_Chr02:4791084..4792597
RNA-Seq ExpressionCmaCh02G008100
SyntenyCmaCh02G008100
Gene Ontology termsGO:0005622 - intracellular (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000225 - Armadillo
IPR011989 - Armadillo-like helical


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035412.1 U-box domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-2054.76Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPGEKFEKMSILLKKSCGAFAEAGAI
        MTARLEKALNEISHEDLDISDEVKE+                  GL EKLE+MDIAD T+ESLALH  VSASNGDP EKFEKMS+LLKKS          
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPGEKFEKMSILLKKSCGAFAEAGAI

Query:  PPLVGLLSTTNLLTQEQAVTIIREVS
        P +V  L + ++  +E A   +  +S
Subjt:  PPLVGLLSTTNLLTQEQAVTIIREVS

XP_004143106.1 U-box domain-containing protein 13 [Cucumis sativus]1.9e-2057.02Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD
        +TARLE+ALNEISHE LDISDEVKEQ   V  +                         + V T+PS+  GLAEKL+LMDIADLT+ESLALH  VSAS+GD
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD

Query:  PGEKFEKMSILLKK
        PG +FEKMSILLK+
Subjt:  PGEKFEKMSILLKK

XP_008448400.1 PREDICTED: U-box domain-containing protein 13 [Cucumis melo]1.4e-2057.89Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD
        +TARLE+ALNEISHE LDISDEVKEQ   V  +                         + V T+PSV  GLAEKL+LMDIADLT+ESLALH  VSAS+GD
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD

Query:  PGEKFEKMSILLKK
        PG +FEKMSILLK+
Subjt:  PGEKFEKMSILLKK

XP_022986793.1 U-box domain-containing protein 13-like [Cucurbita maxima]7.9e-1955.65Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG
        ++ARLE+ALNEISH DLDISDEVKEQ   V               VE            + + T+PSV  GLAEKL+LM++ DLT+ESLALH  VSAS+G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLKK
        DPG +FEKMSILLKK
Subjt:  DPGEKFEKMSILLKK

XP_023511949.1 U-box domain-containing protein 13-like [Cucurbita pepo subsp. pepo]1.0e-1854.78Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG
        ++ARLE+ALNEISH DLDISDEVKEQ   V               VE            + + T+PS+  GLAEKL+LM++ DLT+ESLALH  VSAS+G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLKK
        DPG +FEKMSILLKK
Subjt:  DPGEKFEKMSILLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KFG3 RING-type E3 ubiquitin transferase9.1e-2157.02Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD
        +TARLE+ALNEISHE LDISDEVKEQ   V  +                         + V T+PS+  GLAEKL+LMDIADLT+ESLALH  VSAS+GD
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD

Query:  PGEKFEKMSILLKK
        PG +FEKMSILLK+
Subjt:  PGEKFEKMSILLKK

A0A1S3BJL0 RING-type E3 ubiquitin transferase7.0e-2157.89Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD
        +TARLE+ALNEISHE LDISDEVKEQ   V  +                         + V T+PSV  GLAEKL+LMDIADLT+ESLALH  VSAS+GD
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD

Query:  PGEKFEKMSILLKK
        PG +FEKMSILLK+
Subjt:  PGEKFEKMSILLKK

A0A5A7V197 RING-type E3 ubiquitin transferase7.0e-2157.89Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD
        +TARLE+ALNEISHE LDISDEVKEQ   V  +                         + V T+PSV  GLAEKL+LMDIADLT+ESLALH  VSAS+GD
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE-------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGD

Query:  PGEKFEKMSILLKK
        PG +FEKMSILLK+
Subjt:  PGEKFEKMSILLKK

A0A6J1D426 RING-type E3 ubiquitin transferase1.5e-1853.91Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE---------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG
        +T+RLE+ALNEIS++DLDISDEVKEQ             R+  +               +   T+PSV   LAEKL+LMDIADLT+ESLALH  VSAS+G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE---------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLKK
        DPG +FEKMS LLKK
Subjt:  DPGEKFEKMSILLKK

A0A6J1JHK3 RING-type E3 ubiquitin transferase3.8e-1955.65Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG
        ++ARLE+ALNEISH DLDISDEVKEQ   V               VE            + + T+PSV  GLAEKL+LM++ DLT+ESLALH  VSAS+G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRV--------------QVE------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLKK
        DPG +FEKMSILLKK
Subjt:  DPGEKFEKMSILLKK

SwissProt top hitse value%identityAlignment
A2ZLU6 Protein spotted leaf 114.1e-1035.22Show/hide
Query:  RLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTE----------------------PSVFMG----LAEKLELMDIADLTRESLALHGTVSASNG-DP
        +LE+AL +I + +LDISDEV+EQ   V  +     E                      PS  +     L+EKL LM I DLT+ESLALH  V++  G DP
Subjt:  RLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTE----------------------PSVFMG----LAEKLELMDIADLTRESLALHGTVSASNG-DP

Query:  GEKFEKMSILLK--KSCGAFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVSCPAGQHL
        GE  E+MS+LLK  K           PP+   +  +N     + +TI  E  CP    L
Subjt:  GEKFEKMSILLK--KSCGAFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVSCPAGQHL

Q0IMG9 E3 ubiquitin-protein ligase SPL114.1e-1035.22Show/hide
Query:  RLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTE----------------------PSVFMG----LAEKLELMDIADLTRESLALHGTVSASNG-DP
        +LE+AL +I + +LDISDEV+EQ   V  +     E                      PS  +     L+EKL LM I DLT+ESLALH  V++  G DP
Subjt:  RLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTE----------------------PSVFMG----LAEKLELMDIADLTRESLALHGTVSASNG-DP

Query:  GEKFEKMSILLK--KSCGAFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVSCPAGQHL
        GE  E+MS+LLK  K           PP+   +  +N     + +TI  E  CP    L
Subjt:  GEKFEKMSILLK--KSCGAFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVSCPAGQHL

Q8VZ40 U-box domain-containing protein 146.1e-0631.53Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQ----------------SSRVQV-------EQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPG
        MT  +E AL++I +E +++S+EV+EQ                 S +Q+       E  +  +P +   L+++L+L  I +L +ES A+H    + +GDP 
Subjt:  MTARLEKALNEISHEDLDISDEVKEQ----------------SSRVQV-------EQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPG

Query:  EKFEKMSILLK
        + FE+MS LLK
Subjt:  EKFEKMSILLK

Q9SNC6 U-box domain-containing protein 134.8e-1139.47Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE--------QSVCTEPS-------VFMGLAEKLELMDIADLTRESLALHGTVSASNG
        ++ +LE++L++I +E+LDISDEV+EQ             RV V         QS+C + S       V   +A+KL LM+I DL +ES+ALH  V++S G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE--------QSVCTEPS-------VFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLK
        D GE  E+M+++LK
Subjt:  DPGEKFEKMSILLK

Q9ZV31 U-box domain-containing protein 123.7e-1141.88Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE---------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASN
        +T+ LE+AL+ I +E+L+ISDE+KEQ   V V+                           +    E  +   +AEKL+LM I DLT+ESLAL   VS+S 
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE---------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASN

Query:  G-DPGEKFEKMSILLKK
        G DPGE FEKMS++LKK
Subjt:  G-DPGEKFEKMSILLKK

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 122.6e-1241.88Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE---------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASN
        +T+ LE+AL+ I +E+L+ISDE+KEQ   V V+                           +    E  +   +AEKL+LM I DLT+ESLAL   VS+S 
Subjt:  MTARLEKALNEISHEDLDISDEVKEQSSRVQVE---------------------------QSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASN

Query:  G-DPGEKFEKMSILLKK
        G DPGE FEKMS++LKK
Subjt:  G-DPGEKFEKMSILLKK

AT3G46510.1 plant U-box 133.4e-1239.47Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE--------QSVCTEPS-------VFMGLAEKLELMDIADLTRESLALHGTVSASNG
        ++ +LE++L++I +E+LDISDEV+EQ             RV V         QS+C + S       V   +A+KL LM+I DL +ES+ALH  V++S G
Subjt:  MTARLEKALNEISHEDLDISDEVKEQ-----------SSRVQVE--------QSVCTEPS-------VFMGLAEKLELMDIADLTRESLALHGTVSASNG

Query:  DPGEKFEKMSILLK
        D GE  E+M+++LK
Subjt:  DPGEKFEKMSILLK

AT3G46510.1 plant U-box 131.4e-0258.82Show/hide
Query:  AFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVS
        A AEAGAIP LVGLLST +   QE +VT +  +S
Subjt:  AFAEAGAIPPLVGLLSTTNLLTQEQAVTIIREVS

AT3G54850.1 plant U-box 144.3e-0731.53Show/hide
Query:  MTARLEKALNEISHEDLDISDEVKEQ----------------SSRVQV-------EQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPG
        MT  +E AL++I +E +++S+EV+EQ                 S +Q+       E  +  +P +   L+++L+L  I +L +ES A+H    + +GDP 
Subjt:  MTARLEKALNEISHEDLDISDEVKEQ----------------SSRVQV-------EQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPG

Query:  EKFEKMSILLK
        + FE+MS LLK
Subjt:  EKFEKMSILLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCAAGACTAGAGAAAGCTCTGAATGAAATTTCACATGAAGATCTTGATATATCTGATGAAGTTAAGGAGCAGTCTTCCCGAGTCCAGGTTGAGCAAAGCGTCTG
TACTGAACCTTCTGTCTTTATGGGATTGGCTGAGAAGTTGGAGCTAATGGATATAGCTGATCTTACTCGAGAGTCTCTCGCTTTACATGGAACCGTTTCAGCTAGCAATG
GAGATCCAGGGGAGAAATTTGAGAAAATGTCAATTCTATTGAAGAAATCGTGTGGGGCCTTTGCTGAAGCTGGTGCAATCCCTCCCCTTGTTGGCCTCCTTTCAACAACG
AACCTCCTCACTCAAGAACAGGCTGTGACAATAATAAGAGAAGTATCATGTCCTGCAGGACAGCACCTGGCATAG
mRNA sequenceShow/hide mRNA sequence
GGATATGAATCAGGCGCTGCCGAATGATACCGTGAGAGCTCTCGCGTCGTTTAAGGAAGCTCTGGATTCGACCAAGGAGTTGCTTAGACTTGGGAGCGAGGGGAGCTAGA
TTTGTCTGGCCTTGGAGAAAGAGCAAAATTTGAATCAATTTCACAGGATGACAGCAAGACTAGAGAAAGCTCTGAATGAAATTTCACATGAAGATCTTGATATATCTGAT
GAAGTTAAGGAGCAGTCTTCCCGAGTCCAGGTTGAGCAAAGCGTCTGTACTGAACCTTCTGTCTTTATGGGATTGGCTGAGAAGTTGGAGCTAATGGATATAGCTGATCT
TACTCGAGAGTCTCTCGCTTTACATGGAACCGTTTCAGCTAGCAATGGAGATCCAGGGGAGAAATTTGAGAAAATGTCAATTCTATTGAAGAAATCGTGTGGGGCCTTTG
CTGAAGCTGGTGCAATCCCTCCCCTTGTTGGCCTCCTTTCAACAACGAACCTCCTCACTCAAGAACAGGCTGTGACAATAATAAGAGAAGTATCATGTCCTGCAGGACAG
CACCTGGCATAG
Protein sequenceShow/hide protein sequence
MTARLEKALNEISHEDLDISDEVKEQSSRVQVEQSVCTEPSVFMGLAEKLELMDIADLTRESLALHGTVSASNGDPGEKFEKMSILLKKSCGAFAEAGAIPPLVGLLSTT
NLLTQEQAVTIIREVSCPAGQHLA