CuGenDBv2

Gene ID	CmaCh02G008610
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	DNA repair protein RAD51 homolog 2-like
Genome location	Cma_Chr02:5025266..5029052
RNA-Seq Expression	CmaCh02G008610
Synteny	CmaCh02G008610
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0033063 - Rad51B-Rad51C-Rad51D-XRCC2 complex (cellular component) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domains	IPR030548 - DNA repair protein RAD51 homologue 2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605511.1 DNA repair protein RAD51-like 2, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-31

91.76

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Query:  NHSRVSHLARKEKRTEIDWFDREIEGDGMTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
        NHSRVSHLA KEKRTEI WFDREIEGD MTNKL+NQM L +SITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
Subjt:  NHSRVSHLARKEKRTEIDWFDREIEGDGMTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

KAG7035449.1 DNA repair protein RAD51-like 2 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-16

92.98

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
        MTNKL+NQM L +SITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

XP_022947033.1 DNA repair protein RAD51 homolog 2-like [Cucurbita moschata]

6.4e-16

91.23

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
        MTNKL+NQM L KS TNIFAERIINTAKEALSLTEFELMELLDVGLLEVA+AVAHII
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

XP_022986663.1 DNA repair protein RAD51 homolog 2 isoform X1 [Cucurbita maxima]

2.1e-14

87.5

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLINQM LP+SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

XP_023532335.1 DNA repair protein RAD51 homolog 2-like [Cucurbita pepo subsp. pepo]

6.0e-22

91.04

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Query:  WFDREIEGDGMTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
        WFDREIEGD MTNKL+NQM L KSITNIFAERIINTAKEAL LTEFELMELLD GLLEVASAVAHII
Subjt:  WFDREIEGDGMTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FTX6 DNA repair protein RAD51 homolog 2 isoform X1

1.0e-14

87.5

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLINQM LP+SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

A0A6J1FWQ4 DNA repair protein RAD51 homolog 2 isoform X2

1.0e-14

87.5

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLINQM LP+SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

A0A6J1G5H9 DNA repair protein RAD51 homolog 2-like

3.1e-16

91.23

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII
        MTNKL+NQM L KS TNIFAERIINTAKEALSLTEFELMELLDVGLLEVA+AVAHII
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

A0A6J1JBU9 DNA repair protein RAD51 homolog 2 isoform X2

1.0e-14

87.5

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLINQM LP+SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

A0A6J1JH72 DNA repair protein RAD51 homolog 2 isoform X1

1.0e-14

87.5

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLINQM LP+SI NIFA R INTAKEALSLTEFELMELLDVGL EVASAVAHI
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

SwissProt top hits

e value

%identity

Alignment

Q9SK02 DNA repair protein RAD51 homolog 2

1.9e-10

64.29

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLI +M L   I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

Arabidopsis top hits

e value

%identity

Alignment

AT2G28560.1 DNA repair (Rad51) family protein

1.3e-11

64.29

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLI +M L   I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

AT2G28560.2 DNA repair (Rad51) family protein

1.3e-11

64.29

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Query:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI
        M NKLI +M L   I+NIFA R I TAK+ALS+TEFELMELLDVG+ E+ SA++ I
Subjt:  MTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHI

Sequences

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CDS sequence

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ATGGCTAAGGCTATGGCTAAGCTAAGTTTTTTTGCCGCCATTTCAACTGCTTACCAGATCAACCATTCTAGGGTTTCGCATTTGGCGAGGAAGGAAAAGCGGACC
GAGATAGATTGGTTTGACAGAGAGATTGAGGGAGATGGAATGACGAACAAATTAATTAATCAGATGAGATTACCGAAATCGATAACTAATATTTTCGCAGAGCGA
ATTATTAACACAGCCAAGGAAGCTTTATCCTTAACTGAATTTGAGTTGATGGAGTTATTGGACGTGGGATTATTGGAAGTTGCATCAGCAGTTGCGCACATTATT
TAA

mRNA sequence

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Protein sequence

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MAKAMAKLSFFAAISTAYQINHSRVSHLARKEKRTEIDWFDREIEGDGMTNKLINQMRLPKSITNIFAERIINTAKEALSLTEFELMELLDVGLLEVASAVAHII

CmaCh02G008610 (gene) of Cucurbita maxima (Rimu) v1.1 genome