CuGenDBv2

Gene ID	CmaCh02G009170
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	Cma_Chr02:5464190..5466907
RNA-Seq Expression	CmaCh02G009170
Synteny	CmaCh02G009170
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605579.1 Cell cycle checkpoint protein RAD1, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-166

98.01

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Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

KAG7035494.1 Cell cycle checkpoint protein RAD1 [Cucurbita argyrosperma subsp. argyrosperma]

5.9e-163

93.63

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Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEY+AQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ--
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAG SPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ  
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQ--

Query:  -----------VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAF
                   VDFMYYANTDLLISFHCDRPVSYRYKYKFL ATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAF
Subjt:  -----------VDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAF

Query:  IEFFVKPEEDTTDD
        IEFFVKPEEDTTDD
Subjt:  IEFFVKPEEDTTDD

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

1.3e-167

98.67

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

8.4e-170

100

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Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

3.5e-168

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Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B4R8 uncharacterized protein LOC103486009

3.2e-159

92.69

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLK+VDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQ SRIAFIEFFVKPEED+++
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

3.2e-159

92.69

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC  DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LS +E+KYPGPDMQLLLK+VDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PSTSH HIDSAGYQQ SRIAFIEFFVKPEED+++
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

A0A6J1CW92 uncharacterized protein LOC111015362 isoform X1

6.1e-158

94.02

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD+E PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLG FVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
         S  EIKYPGPDMQLL+KSVDSLDACIYAEIRTRIPETISWDY FEPAGSSPLSFTVKSAALKEAIDDLEWPGSS+QI LEP+PPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTS  HIDSAGYQQ SRIAFIEFFVKPEEDTT+
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

6.5e-168

98.67

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDS DACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQ SRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

4.1e-170

100

Show/hide

Query:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
        LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD
Subjt:  LSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVD

Query:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
Subjt:  FMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

7.0e-18

26.1

Show/hide

Query:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP
        LV  LDNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q +VF  +    ++   F ++L I +D L+ F     PG L+ + + Y 
Subjt:  LVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSIVEIKYP

Query:  GPDMQLLLKSVDSLDACIYAEIRTRIP-ETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQVDFMYYA
        G    L+L  ++        +I T+ P ET+ +D+    + +      ++S  L+EA  +L+  G  +QI++ P  P     TF   G+  L     Y  
Subjt:  GPDMQLLLKSVDSLDACIYAEIRTRIP-ETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSV---TFKGEGHGDLQVDFMYYA

Query:  NTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD
        ++DL+ +FHCD+    RYK   L+ +T  +  S     + S  T  R G L +Q+++                  +  +I F+E++  P+E+  +
Subjt:  NTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTD

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

1.0e-136

76.95

Show/hide

Query:  SSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ + PDL+CQLDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  SIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDF
        + +EIKYPGPDM+LLLKSVD+L++CIY+EIRTRIPET++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ+DF
Subjt:  SIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDF

Query:  MYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEE
        MYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV++     P ++SAGYQ  SRIA+IEFFVKPEE
Subjt:  MYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

1.5e-111

77.05

Show/hide

Query:  ESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSP
        ESGCLQAKVYLQRE+F +YEY AQ RPRFG+SLG+ VD LNTFS PG  + +EIKYPGPDM+LLLKSVD+L++CIY+EIRTRIPET++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPGPDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSSVQISL+  PP V F+GEGHGDLQ+DFMYYANTDLL++FHCD  VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR

Query:  GGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEE
        GGMLKVQHLVSV++     P ++SAGYQ  SRIA+IEFFVKPEE
Subjt:  GGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEE

Sequences

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CDS sequence

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ATGAGCTCATCGGCGGTGGATGCGGAGGCGCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGA
TGCCGTAATCGAACTGTCAGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACA
GTGCACAAGCTCGCCCAAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAATACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGA
CCTGACATGCAACTTCTTCTCAAGTCAGTTGATTCATTAGATGCATGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACC
TGCAGGAAGTAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTC
CCCCTTCTGTCACCTTCAAAGGAGAAGGTCATGGAGACTTGCAGGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTATCC
TACAGGTACAAATACAAATTTCTACGAGCGACAACTTCGAACATACCGAGCAGTGTGATCAGAGAAAATAGGGGAAGCAAGTTGACAATTGGGAGAGGAGGAATGCTAAA
AGTTCAGCACCTGGTTTCTGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACTCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAAC
CAGAAGAAGACACCACAGATGATTAG

mRNA sequence

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TATTTATCTAAGAAAGGTGAAAATTAATTTAGTGGAAAACATCGTTGTTTTCTTGTAGCGTCAATTTGCCTTCGCTCCATTTCACTGAGCAGTAAGCGGTGGTGGCGAAA
GCCGGTGAGTGTTGACTGAGAACGCATTCAAAAAAGAAGAAGAAAACGGAGGGAGAAAAATTCACCGGCAATTTGGCGGGAAAGCTGAAACCATGAGCTCATCGGCGGTG
GATGCGGAGGCGCCCGATCTGGTTTGTCAACTTGACAACGTCCAAGGTCTGGTGGATGCATTCACTGCCGTTCGATGGAAACGCCATCAGGATGCCGTAATCGAACTGTC
AGAGCATGGCATCGTTTTGATCGTTGAAGAATCAGGCTGTCTTCAGGCGAAAGTGTATCTGCAGCGTGAGGTTTTCATTCGTTATGAATACAGTGCACAAGCTCGCCCAA
GGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGCTTGAATACATTTTCTGTTCCTGGACGTTTAAGCATCGTTGAAATCAAATACCCGGGACCTGACATGCAACTTCTT
CTCAAGTCAGTTGATTCATTAGATGCATGTATTTATGCGGAGATCCGAACCAGAATCCCAGAAACGATTTCATGGGATTACAATTTTGAACCTGCAGGAAGTAGCCCACT
CAGTTTCACTGTCAAGTCTGCAGCTCTGAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGCGTCCAGATATCTCTAGAACCATCTCCCCCTTCTGTCACCTTCA
AAGGAGAAGGTCATGGAGACTTGCAGGTAGATTTCATGTACTATGCAAACACTGATCTTTTGATCTCGTTCCATTGCGATCGTCCGGTATCCTACAGGTACAAATACAAA
TTTCTACGAGCGACAACTTCGAACATACCGAGCAGTGTGATCAGAGAAAATAGGGGAAGCAAGTTGACAATTGGGAGAGGAGGAATGCTAAAAGTTCAGCACCTGGTTTC
TGTGGCAAGACCCTCCACTTCACACCCACATATAGATTCTGCTGGTTATCAGCAACTCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGACACCACAG
ATGATTAGTGGTTCTTTTCTATTCTCTTTTTGAAGTATTGCACAATCGAGCTATGCTTATTTTGATAGATTCTTTCGTATATTTTGCCATCTTCTGGCGTTCCCATTGAT
CAAGGGATCTCTTGAGTTCTGTTTTGGGCCTTTGGTTTGCTCAAATCATTTTGACAAAAGTTAGACCAAATATACCGAACTTAACCGAGTTGAACTTTCTCTAGCTTACT
TAAGGGTGG

Protein sequence

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MSSSAVDAEAPDLVCQLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQREVFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSIVEIKYPG
PDMQLLLKSVDSLDACIYAEIRTRIPETISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQISLEPSPPSVTFKGEGHGDLQVDFMYYANTDLLISFHCDRPVS
YRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGMLKVQHLVSVARPSTSHPHIDSAGYQQLSRIAFIEFFVKPEEDTTDD

CmaCh02G009170 (gene) of Cucurbita maxima (Rimu) v1.1 genome