; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G009580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G009580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionAlpha-L-fucosidase
Genome locationCma_Chr02:5690244..5690953
RNA-Seq ExpressionCmaCh02G009580
SyntenyCmaCh02G009580
Gene Ontology termsGO:0006004 - fucose metabolic process (biological process)
GO:0016139 - glycoside catabolic process (biological process)
GO:0005764 - lysosome (cellular component)
GO:0004560 - alpha-L-fucosidase activity (molecular function)
InterPro domainsIPR000933 - Glycoside hydrolase, family 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022929122.1 alpha-L-fucosidase 1-like [Cucurbita moschata]1.4e-2667.42Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        +K+   +G +      +NVLD+DHLWTYWAP  ADADA  +HWI+IRSQQ Q L+FNV+RIQEAIGLGQRI+RHEIYLDGK+IV+ESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

XP_022958355.1 putative alpha-L-fucosidase 1 [Cucurbita moschata]1.3e-3077.53Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        L++   +G +      +NVLDNDHLWTYWAPRG  ADAGGDHWI+IRSQQKQ L+FNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

XP_022970037.1 putative alpha-L-fucosidase 1 [Cucurbita maxima]2.9e-2768.54Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        +K+   +G +      +NVLD+DHLWTYWAP  ADADAG +HWI+IRSQQ Q L+FNV+RIQEAIGLGQRI+RHEIYLDGK+IV+ESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

XP_023520506.1 alpha-L-fucosidase 1-like [Cucurbita pepo subsp. pepo]2.9e-2761.62Show/hide
Query:  FLLKFGSKLLLKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        F +       +K+   +G +      +NVLD+DHLWTYWAP  ADADA  +HWI+IRSQQ Q L+FNV+RIQEAIGLGQRI+RHEIYLDGK+IV+ESSV
Subjt:  FLLKFGSKLLLKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

XP_023534414.1 putative alpha-L-fucosidase 1 [Cucurbita pepo subsp. pepo]1.5e-3176.34Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRG----ADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        L++   +G +      +NVLDNDHLWTYWAPRG    ADADAGGDHWI+IRSQQKQ L+FNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRG----ADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

TrEMBL top hitse value%identityAlignment
A0A6J1DPV7 Alpha-L-fucosidase5.5e-2465.17Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        LK+   +G +      QNVLD+DHLWTYWAPR  + D   DHWI+IRSQ  +RL+FNVVRIQEAIGLGQRIKRHEIYLDGK IV + +V
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

A0A6J1ELW0 Alpha-L-fucosidase6.9e-2767.42Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        +K+   +G +      +NVLD+DHLWTYWAP  ADADA  +HWI+IRSQQ Q L+FNV+RIQEAIGLGQRI+RHEIYLDGK+IV+ESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

A0A6J1H387 Alpha-L-fucosidase6.1e-3177.53Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        L++   +G +      +NVLDNDHLWTYWAPRG  ADAGGDHWI+IRSQQKQ L+FNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

A0A6J1HY04 Alpha-L-fucosidase1.4e-2768.54Show/hide
Query:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV
        +K+   +G +      +NVLD+DHLWTYWAP  ADADAG +HWI+IRSQQ Q L+FNV+RIQEAIGLGQRI+RHEIYLDGK+IV+ESSV
Subjt:  LKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV

A0A7J6HP28 Alpha-L-fucosidase2.1e-2354.21Show/hide
Query:  IQSCHSHNFLLKFGSKLLLKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKR
        I +  S N + KF    L+K+   +G +      +NV+DNDHLWTYW+P+  D DA GDHWI+ RS   + L+FNVVRIQEAIGLGQRIKRHEIY+DGKR
Subjt:  IQSCHSHNFLLKFGSKLLLKSQQPKGWQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKR

Query:  IVEESSV
        +   ++V
Subjt:  IVEESSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACGGCTTCGCTGGAACACCGTGCTGGTCAACCATCAATCGTAGTTCGTTGGCAATTGGAGCCGAAGGCATTACTCAGGGTGGTTTTGGCACAAATCAGA
GTCCCCAAAGAGCTTAAAAAGGCTCCTGGAAATCTACTACAACTCAGTGGGAAGATATTGTGTTCTTCTCTTCAATGTCCCGCCCAACTCCACAGGTCTAATTGC
CCAAGAAGATGCCCACACTCTCACCCAATTCAAAGCTGCCATTCACACAATTTTCTCCTCAAATTTGGCTCAAAACTGCTCCTTAAGAGCCAGCAGCCAAAGGGG
TGGCAAAGAAAGTGCGTTTGGGCTCAAAATGTGTTGGACAACGACCATTTGTGGACTTATTGGGCACCCAGGGGAGCTGATGCTGATGCTGGTGGTGACCATTGG
ATTGACATCAGAAGTCAGCAGAAGCAACGGCTGAAATTCAATGTGGTGAGGATCCAAGAGGCCATAGGGCTTGGTCAGAGGATCAAACGGCATGAGATTTACTTG
GATGGGAAGAGGATTGTGGAGGAGAGTAGCGTT
mRNA sequenceShow/hide mRNA sequence
ATGAGAACGGCTTCGCTGGAACACCGTGCTGGTCAACCATCAATCGTAGTTCGTTGGCAATTGGAGCCGAAGGCATTACTCAGGGTGGTTTTGGCACAAATCAGA
GTCCCCAAAGAGCTTAAAAAGGCTCCTGGAAATCTACTACAACTCAGTGGGAAGATATTGTGTTCTTCTCTTCAATGTCCCGCCCAACTCCACAGGTCTAATTGC
CCAAGAAGATGCCCACACTCTCACCCAATTCAAAGCTGCCATTCACACAATTTTCTCCTCAAATTTGGCTCAAAACTGCTCCTTAAGAGCCAGCAGCCAAAGGGG
TGGCAAAGAAAGTGCGTTTGGGCTCAAAATGTGTTGGACAACGACCATTTGTGGACTTATTGGGCACCCAGGGGAGCTGATGCTGATGCTGGTGGTGACCATTGG
ATTGACATCAGAAGTCAGCAGAAGCAACGGCTGAAATTCAATGTGGTGAGGATCCAAGAGGCCATAGGGCTTGGTCAGAGGATCAAACGGCATGAGATTTACTTG
GATGGGAAGAGGATTGTGGAGGAGAGTAGCGTT
Protein sequenceShow/hide protein sequence
MRTASLEHRAGQPSIVVRWQLEPKALLRVVLAQIRVPKELKKAPGNLLQLSGKILCSSLQCPAQLHRSNCPRRCPHSHPIQSCHSHNFLLKFGSKLLLKSQQPKG
WQRKCVWAQNVLDNDHLWTYWAPRGADADAGGDHWIDIRSQQKQRLKFNVVRIQEAIGLGQRIKRHEIYLDGKRIVEESSV