; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G009630 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G009630
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTumor necrosis factor receptor family protein
Genome locationCma_Chr02:5726914..5730179
RNA-Seq ExpressionCmaCh02G009630
SyntenyCmaCh02G009630
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605625.1 hypothetical protein SDJN03_02942, partial [Cucurbita argyrosperma subsp. sororia]7.4e-7797.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFAR FSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATPNDPR EELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]6.7e-7898.06Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATPNDPR EELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]2.5e-7797.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATP+DPRAEELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

XP_022996189.1 uncharacterized protein LOC111491495 [Cucurbita maxima]3.5e-79100Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

XP_023534502.1 uncharacterized protein LOC111796041 [Cucurbita pepo subsp. pepo]3.1e-7595.54Show/hide
Query:  MWWLRGIQTIRNAD--GGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM
        MWWLRGIQTIRNAD  GGGGSAGLVFSTFARYFSRSRAENLRKINPKLTP EASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM
Subjt:  MWWLRGIQTIRNAD--GGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWM

Query:  RGRKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RGRKMLQLFCNQVGSNKKFLLATP+DPRAEELKSASEPVVQRRKKQKA+IRR+K SK
Subjt:  RGRKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein3.6e-6180.39Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        W R IQ I NADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPLT+SNAWIKAQESGV GLNSKTHMKLLLKWMRGRK
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        ML LFC+ VGSNKKFLL TP+DPRAEELK++SE   QR+K+ K+  +R+K SK
Subjt:  MLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

A0A1S3ATS9 uncharacterized protein LOC1034828882.0e-5978.43Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        W R IQ I N DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV++QHGPLTVSNAWIKAQESGV GLNSKTHMKLLLKWMRGR+
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        ML LFC+ VGSNKKFLL TP+DPRAEELK+ SE   QR+K+ K+  +R+K SK
Subjt:  MLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

A0A6J1E538 uncharacterized protein LOC1110261278.0e-6181.17Show/hide
Query:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK
        WLRG Q I +ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL++SNAWIKAQE GV GLNSKTHMKL+LKWMRGRK
Subjt:  WLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRK

Query:  MLQLFCNQVGSNKKFLLAT-PNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        ML+L CNQVGSNKKFLL+T P+DP+A++LKS+SE  VQR K+ K   RR+K SK
Subjt:  MLQLFCNQVGSNKKFLLAT-PNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

A0A6J1H3U5 uncharacterized protein LOC1114598521.2e-7797.42Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTF RYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATP+DPRAEELKSASEPVVQRRKKQKA+IRR+KASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

A0A6J1K817 uncharacterized protein LOC1114914951.7e-79100Show/hide
Query:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
Subjt:  MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
        RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK
Subjt:  RKMLQLFCNQVGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein9.1e-3352.03Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG
        A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY + K HGPL+V N W++AQE+GV GLNSKTHMKLLLKWMRG
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRG

Query:  RKMLQLFCNQVGSNKKFL-LATPNDPRAEELKSASEPVVQRRKKQKAR
        +KML+L CNQVGS+KKF     P DP  E+  +  E   Q  KK++++
Subjt:  RKMLQLFCNQVGSNKKFL-LATPNDPRAEELKSASEPVVQRRKKQKAR

AT5G49410.1 unknown protein1.1e-1736.36Show/hide
Query:  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT
        V     R+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+ GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Subjt:  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT

AT5G49410.2 unknown protein1.1e-1736.36Show/hide
Query:  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT
        V     R+F+      ++ I     P++   + + ++ ++K HGPLT++  W + +E G+ GL SK HMK++L+WMR R+ L+L CN VG +K+FL  T
Subjt:  VFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQVGSNKKFLLAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGA
GAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTT
GGATTAAAGCCCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAA
GTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACG
AATAAGGAGGAAAAAGGCATCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTGGCTTCGCGGTATTCAAACAATTAGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTCGCGAGGTATTTCTCGAGGTCGCGAGCAGA
GAATCTTAGGAAAATCAATCCCAAGTTGACCCCTCAGGAGGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCATGGACCGCTCACAGTTTCCAATGCTT
GGATTAAAGCCCAGGAATCTGGCGTGGGTGGATTGAACAGCAAAACACACATGAAGCTGTTGCTGAAATGGATGAGGGGAAGGAAGATGCTGCAGCTTTTCTGCAACCAA
GTTGGTTCGAACAAGAAATTTCTGCTCGCCACGCCCAATGATCCTCGAGCAGAAGAGTTGAAGAGTGCTTCAGAACCAGTAGTCCAGAGACGAAAGAAACAGAAGGCACG
AATAAGGAGGAAAAAGGCATCAAAATAAACTTTTGCCAACGTCCATGAGTTTACGATGCCGATGCAGTCGATGGACTACCCTCGGACTTGTTAGTACTGATGGCAGGCTC
ACGACTTATGACGGTGAATTTATGAGTTTCTGCCATCACTGTTTTCCCCCAAATTTCAACTCTTTTGGGTGTTATGCAAGGTTTCTTTTGAACATTTCACGTTGACTTGG
TTTCCATGCATTGACTGACAAACATGCATTTGAATCGTGGTTGATAAAAAAGCATGGATTCGGATGTCTCATTGGATTAAACAATTTAAGTCAAATAAAAATCTTAAAAT
TTTAGAATAGGA
Protein sequenceShow/hide protein sequence
MWWLRGIQTIRNADGGGGSAGLVFSTFARYFSRSRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLTVSNAWIKAQESGVGGLNSKTHMKLLLKWMRGRKMLQLFCNQ
VGSNKKFLLATPNDPRAEELKSASEPVVQRRKKQKARIRRKKASK