CuGenDBv2

Gene ID	CmaCh02G009910
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L13
Genome location	Cma_Chr02:5904604..5906690
RNA-Seq Expression	CmaCh02G009910
Synteny	CmaCh02G009910
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001380 - Ribosomal protein L13e IPR018256 - Ribosomal protein L13e, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605653.1 hypothetical protein SDJN03_02970, partial [Cucurbita argyrosperma subsp. sororia]

5.3e-107

99.03

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKAPVELV VTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_004143667.1 60S ribosomal protein L13-3 [Cucumis sativus]

3.8e-105

96.6

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEK  VELVK+TE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_008467320.1 PREDICTED: 60S ribosomal protein L13-3-like [Cucumis melo]

2.9e-105

97.09

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEK  VELVKVTE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022958723.1 60S ribosomal protein L13-3-like [Cucurbita moschata]

1.1e-107

99.51

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022995473.1 60S ribosomal protein L13-3-like [Cucurbita maxima]

1.3e-108

100

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKX2 60S ribosomal protein L13

1.8e-105

96.6

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEK  VELVK+TE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A1S3CTG8 60S ribosomal protein L13

1.4e-105

97.09

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEK  VELVKVTE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A5A7UNR2 60S ribosomal protein L13

1.8e-105

96.6

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVK FPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEK  VELVK+TE+MKSFKAYDKLRVER NARHVGARLK+AAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1H3W1 60S ribosomal protein L13

5.2e-108

99.51

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYM IGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1K811 60S ribosomal protein L13

6.1e-109

100

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

SwissProt top hits

e value

%identity

Alignment

P41127 60S ribosomal protein L13-1

4.1e-94

83.01

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+PI  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41128 60S ribosomal protein L13-1

1.3e-92

82.52

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELK+AGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELA ATQVQG YMPI  EK   ELVK+T EMKS KA+DK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41129 60S ribosomal protein L13-2

1.7e-92

82.04

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGI++DHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELA ATQVQG YMPI  EK  +ELVK+T EMKS  AYDK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9FF90 60S ribosomal protein L13-3

5.4e-94

83.01

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELA ATQVQG YMPI   KA +ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9SMT4 Putative 60S ribosomal protein L13-2

1.7e-79

73.3

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+K W+NYV+T FNQPA KTRRR ARQ KAVK FPRPTAGP+RP+VH QTL YNMKVRAG+GF+LEELKAAGIPKK APTIGI+VDH R
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE  Q NVQRLKTYKAK+V+FPR AR  K GDS  +ELA ATQVQ  +MPI  E   +ELVK+T +MK F AYDK+R+E  N RH G R KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Arabidopsis top hits

e value

%identity

Alignment

AT3G49010.1 breast basic conserved 1

2.9e-95

83.01

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+PI  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.2 breast basic conserved 1

2.9e-95

83.01

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+PI  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.3 breast basic conserved 1

2.9e-95

83.01

Show/hide

Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELA ATQVQG Y+PI  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.4 breast basic conserved 1

2.7e-93

82.52

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIP+GHF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKK APTIGIAVDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ NVQRLKTYK K+V+FPRRAR  KAGDSTPEELA ATQVQG Y+PI  EK  +ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT5G23900.1 Ribosomal protein L13e family protein

3.8e-95

83.01

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Query:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR
        MKHNNVIPS HFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKK APTIGI+VDHRR
Subjt:  MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRR

Query:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA
        +NRSLE LQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELA ATQVQG YMPI   KA +ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Sequences

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CDS sequence

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ATGAAGCACAACAATGTTATACCTAGTGGGCACTTTAGGAAGCATTGGCAAAACTATGTTAGAACTTGGTTCAACCAACCTGCTCGGAAAACAAGGAGAAGGAAC
GCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACGTTGAAGTATAACATGAAAGTCAGAGCT
GGCAGAGGATTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAGTACGCCCCAACAATTGGCATTGCAGTCGATCATCGTCGCAGAAACCGCTCCTTG
GAGAGTCTTCAAGCCAATGTGCAGAGGCTGAAGACTTACAAGGCCAAGGTGGTCGTTTTCCCACGACGTGCTCGCAAGTTCAAGGCTGGTGATTCTACTCCTGAG
GAACTAGCAACTGCCACCCAGGTCCAGGGCTCTTACATGCCTATTGGACTAGAGAAGGCACCAGTTGAGCTTGTGAAGGTAACAGAAGAAATGAAATCTTTTAAG
GCCTATGATAAGCTTCGTGTTGAGCGAACGAATGCTCGCCATGTTGGTGCTCGGTTGAAGAGGGCTGCCGAGGCAGAGAAGGAAGAGAAGAAGTAA

mRNA sequence

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AGAACCGGAAGGGGAGTCCCTAGGGTTTTTGTCAATGGCCGCTATTTATGAAATTTTAGTAGCCATTGAACACAGAAGGAACGAAGCGACTGGAATTGTCGAAGG
GGGCGCAGAGAAAGAATAAGGTAAGCCATGAAGCACAACAATGTTATACCTAGTGGGCACTTTAGGAAGCATTGGCAAAACTATGTTAGAACTTGGTTCAACCAA
CCTGCTCGGAAAACAAGGAGAAGGAACGCTCGTCAGGAAAAGGCTGTGAAAACTTTCCCTCGGCCTACTGCTGGACCACTTCGACCTATTGTTCATGGACAGACG
TTGAAGTATAACATGAAAGTCAGAGCTGGCAGAGGATTCTCTTTGGAAGAATTGAAGGCAGCTGGCATTCCAAAGAAGTACGCCCCAACAATTGGCATTGCAGTC
GATCATCGTCGCAGAAACCGCTCCTTGGAGAGTCTTCAAGCCAATGTGCAGAGGCTGAAGACTTACAAGGCCAAGGTGGTCGTTTTCCCACGACGTGCTCGCAAG
TTCAAGGCTGGTGATTCTACTCCTGAGGAACTAGCAACTGCCACCCAGGTCCAGGGCTCTTACATGCCTATTGGACTAGAGAAGGCACCAGTTGAGCTTGTGAAG
GTAACAGAAGAAATGAAATCTTTTAAGGCCTATGATAAGCTTCGTGTTGAGCGAACGAATGCTCGCCATGTTGGTGCTCGGTTGAAGAGGGCTGCCGAGGCAGAG
AAGGAAGAGAAGAAGTAAATGGTTCAAAGGTTTTAACTGTGCGCCCATATGTTTTGAATGAAAATTCAAGTTTGCTAGTGTACGGCGTTGAAATTTGGTACCTTT
TTCCCTAATTTATATGTTCAAACCTGAATTATGAGTTCAATTTTGAAATGATTAGAGATTTTTTCTATGATGCATGTGAACGAACATAAATACGCAGATTTCACA
GGTGTTATACGATACCTAGATAGTTATATGCGGCTTATACTATTGAAATATACTATTAGTCCC

Protein sequence

Show/hide protein sequence

MKHNNVIPSGHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKTFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKYAPTIGIAVDHRRRNRSL
ESLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELATATQVQGSYMPIGLEKAPVELVKVTEEMKSFKAYDKLRVERTNARHVGARLKRAAEAEKEEKK

CmaCh02G009910 (gene) of Cucurbita maxima (Rimu) v1.1 genome