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CmaCh02G010160 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G010160
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationCma_Chr02:6038433..6039249
RNA-Seq ExpressionCmaCh02G010160
SyntenyCmaCh02G010160
Gene Ontology termsGO:0010150 - leaf senescence (biological process)
GO:0010506 - regulation of autophagy (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0072593 - reactive oxygen species metabolic process (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605678.1 CDGSH iron-sulfur domain-containing protein NEET, partial [Cucurbita argyrosperma subsp. sororia]7.4e-4996.15Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
        MASL ATSALPTTRPPH NFTVGGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

KAG7035586.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma]3.1e-4794.23Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
        MASL ATSALPTT PPH NFTVGG+PRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022958373.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita moschata]1.5e-4997.12Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
        MASL ATSALPTTRPPHGNFTVGGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

XP_022996357.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]7.1e-52100Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
        MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]6.7e-5097.09Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
        MASL ATSALPTTRPPH NFT+GGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

TrEMBL top hitse value%identityAlignment
A0A2U1LE02 2 iron, 2 sulfur cluster binding protein1.2e-3170.75Show/hide
Query:  MASLAATSALPTTRPPHG---NFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGP
        MAS      LP T  P     + T   +  RRMVVVRAEGG  INP IRK+EDKVVD+VVV +LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGP
Subjt:  MASLAATSALPTTRPPHG---NFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGP

Query:  LLLKKQ
        LLLKKQ
Subjt:  LLLKKQ

A0A2U1LM16 2 iron, 2 sulfur cluster binding protein2.6e-3169.81Show/hide
Query:  MASLAATSALPTTRPPHG---NFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGP
        MAS      +P T  P     + T   +  RRMVVVRAEGG  INP IRK+EDKVVD+VVV +LAKPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGP
Subjt:  MASLAATSALPTTRPPHG---NFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGP

Query:  LLLKKQ
        LLLKKQ
Subjt:  LLLKKQ

A0A6J1E4B9 CDGSH iron-sulfur domain-containing protein NEET2.0e-3168.14Show/hide
Query:  MASLAAT-----SALPTTRPPHGNF----TVGGMPRRRMVVVRAE-GGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKA
        MAS+  T     +++ +T   H N     +  G  RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHVKHNKA
Subjt:  MASLAAT-----SALPTTRPPHGNF----TVGGMPRRRMVVVRAE-GGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKA

Query:  TGDNVGPLLLKKQ
        TGDNVGPLLLKKQ
Subjt:  TGDNVGPLLLKKQ

A0A6J1H2X5 CDGSH iron-sulfur domain-containing protein NEET7.2e-5097.12Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
        MASL ATSALPTTRPPHGNFTVGGMPRRRM VVVRAEGG+AINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRM-VVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLL

Query:  LKKQ
        LKKQ
Subjt:  LKKQ

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET3.4e-52100Show/hide
Query:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
        MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL
Subjt:  MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL

Query:  KKQ
        KKQ
Subjt:  KKQ

SwissProt top hitse value%identityAlignment
B9EPI1 CDGSH iron-sulfur domain-containing protein 2A1.0e-1658.73Show/hide
Query:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL +    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q3ZBU2 CDGSH iron-sulfur domain-containing protein 17.7e-1747.67Show/hide
Query:  GNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G   +G +  +R  V        +NP I+K   KVV +  + DL      YCRCWRS  FPLCDGSH KHN+ TGDNVGPL++KK+
Subjt:  GNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A1.0e-1660.32Show/hide
Query:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q7T326 CDGSH iron-sulfur domain-containing protein 22.7e-1760.32Show/hide
Query:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        IN  I+K   KVV+ + + DL  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK+
Subjt:  INPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET5.9e-3381.25Show/hide
Query:  GMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G  ++RMVVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding4.2e-3481.25Show/hide
Query:  GMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
        G  ++RMVVVRAEGG  INP IRK+EDKVVDSVVV +L+K +TPYCRCWRS TFPLCDGSHVKHNKA GDNVGPLLLKKQ
Subjt:  GMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCGCTTGCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCTCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTCAGAGCCGAAGG
CGGCGAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTAGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTGGAGGT
CAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACTGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAG
mRNA sequenceShow/hide mRNA sequence
AAATGGAGATCCACCGATTAGGCCGGTTTAAGGCACCTTTAAACCGTGCCCTCCACACGTTCATCATCCATTACCACATTTCCTTCACTCGCATCACCACCCTTCCTCTG
CTCCAATGGCCTCGCTTGCTGCCACTTCCGCCTTACCAACAACCCGTCCTCCTCACGGTAACTTCACCGTCGGCGGAATGCCGCGGCGGCGCATGGTGGTGGTCAGAGCC
GAAGGCGGCGAAGCCATAAACCCAGCAATCAGGAAGAGCGAGGACAAAGTAGTGGACTCCGTGGTTGTCGCCGACCTTGCCAAGCCCCTCACACCCTATTGCAGATGTTG
GAGGTCAGCCACATTTCCTCTGTGTGATGGAAGCCATGTTAAGCACAACAAGGCCACTGGAGATAATGTCGGCCCTTTGCTCTTAAAGAAGCAATAGAGACAATCTTTCA
TGTTTTTTCTTCCAAGTTCTTCTCTGTTCTTGAGTTTCAATTGGATTACTGTCAAATCATTCTACTTTTATTTGCATTCCCATCCCTCATCTTTATATGATTATCAATTT
AGTCCTTATCCCCCTTCAAATTTTGCATACAAGTCCCTCCGTCCCATAAAGATTCGATTTTTTTGCTATATTTCAATTCTCTTAAGTCGTTTTTAGTCATTTTATTCTTA
GAATTGCTCTCATTTGCGTAAGTTCTACCACC
Protein sequenceShow/hide protein sequence
MASLAATSALPTTRPPHGNFTVGGMPRRRMVVVRAEGGEAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ