; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G010330 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G010330
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA polymerase delta subunit 4
Genome locationCma_Chr02:6162512..6164400
RNA-Seq ExpressionCmaCh02G010330
SyntenyCmaCh02G010330
Gene Ontology termsGO:0000731 - DNA synthesis involved in DNA repair (biological process)
GO:0006261 - DNA-dependent DNA replication (biological process)
GO:0043625 - delta DNA polymerase complex (cellular component)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR007218 - DNA polymerase delta, subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605696.1 DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia]9.4e-5996.75Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSD VQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIE+LLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

XP_008467236.1 PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo]1.4e-4679.2Show/hide
Query:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL
        MAS RGG+KDFYKQRK+SG+S  K SKPSS KTKS A+SA+L S+ VQPAAL+SHGSLDL+DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGL
Subjt:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL

Query:  NPPKEIETLLKGGKVQLECLWASRI
        NPPK+I TLLK GKVQLECLW SR+
Subjt:  NPPKEIETLLKGGKVQLECLWASRI

XP_022957680.1 uncharacterized protein LOC111459143 [Cucurbita moschata]6.5e-6098.37Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIETLLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

XP_022995740.1 uncharacterized protein LOC111491182 [Cucurbita maxima]3.4e-61100Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIETLLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

XP_023532644.1 uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]1.2e-5896.75Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSDGVQPA LISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELA KLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIETLLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

TrEMBL top hitse value%identityAlignment
A0A0A0KND6 Uncharacterized protein9.8e-4678.4Show/hide
Query:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL
        MAS RGG+KDFYKQRK+SG+S  K SKPSS KTKS A+SA+L SD VQPAAL+SHGSLDL+DDYG SEN LRQFDMN AYGPCLGMTRM RWE A  LGL
Subjt:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL

Query:  NPPKEIETLLKGGKVQLECLWASRI
        NPPK+I TLLK GKVQLECLW SR+
Subjt:  NPPKEIETLLKGGKVQLECLWASRI

A0A1S3CT23 DNA polymerase delta subunit 46.8e-4779.2Show/hide
Query:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL
        MAS RGG+KDFYKQRK+SG+S  K SKPSS KTKS A+SA+L S+ VQPAAL+SHGSLDL+DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGL
Subjt:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL

Query:  NPPKEIETLLKGGKVQLECLWASRI
        NPPK+I TLLK GKVQLECLW SR+
Subjt:  NPPKEIETLLKGGKVQLECLWASRI

A0A5A7UNL0 DNA polymerase delta subunit 46.8e-4779.2Show/hide
Query:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL
        MAS RGG+KDFYKQRK+SG+S  K SKPSS KTKS A+SA+L S+ VQPAAL+SHGSLDL+DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGL
Subjt:  MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGL

Query:  NPPKEIETLLKGGKVQLECLWASRI
        NPPK+I TLLK GKVQLECLW SR+
Subjt:  NPPKEIETLLKGGKVQLECLWASRI

A0A6J1H180 uncharacterized protein LOC1114591433.1e-6098.37Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSS KTKSRA+SATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIETLLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

A0A6J1K4T3 uncharacterized protein LOC1114911821.7e-61100Show/hide
Query:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
        MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP
Subjt:  MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNP

Query:  PKEIETLLKGGKVQLECLWASRI
        PKEIETLLKGGKVQLECLWASRI
Subjt:  PKEIETLLKGGKVQLECLWASRI

SwissProt top hitse value%identityAlignment
O59835 DNA polymerase delta subunit 45.6e-0651.16Show/hide
Query:  ENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLL
        E IL  FD    YGP LGMTRM+RW+ A+   LNPP+ +  +L
Subjt:  ENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLL

Q3T0X9 DNA polymerase delta subunit 42.1e-0844.07Show/hide
Query:  ESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKG--GKVQLEC-LW
        E   +LRQFD+   YGPC G+TR++RW  A ++GL PP E+  +L+   G  + +C LW
Subjt:  ESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKG--GKVQLEC-LW

Q9CWP8 DNA polymerase delta subunit 42.3e-0752.38Show/hide
Query:  ILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLK
        +LRQFD+   YGPC G+TR++RW  A ++GL PP E+  +LK
Subjt:  ILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLK

Q9HCU8 DNA polymerase delta subunit 42.7e-0843.75Show/hide
Query:  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLK--GGKVQLEC-LW
        RD+      +LRQFD+   YGPC G+TR++RW  A+++GL PP E+  +LK   G  + +C LW
Subjt:  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLK--GGKVQLEC-LW

Arabidopsis top hitse value%identityAlignment
AT1G09815.1 polymerase delta 48.5e-3458.73Show/hide
Query:  MASARGGMKDFYKQRKNS---GVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLG
        MA+    +K FYKQ K++   G+SK SKPSS K   + ++A   SD  QPAALISHGS+DL +DY + E +LRQFDMN+ YGPCLGMTR++RWE A +LG
Subjt:  MASARGGMKDFYKQRKNS---GVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLG

Query:  LNPPKEIETLLKGGKVQLECLWASRI
        +NPP EIE LLK GKVQ +CLW  R+
Subjt:  LNPPKEIETLLKGGKVQLECLWASRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGGCTCGAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAGTCTCTAAGGTTTCAAAGCCCTCTTCTGGGAAAACCAAATCTCGGGCCAGCTC
TGCAACTTTGGACTCCGATGGCGTTCAACCGGCGGCTCTTATTTCTCACGGTTCCCTCGATCTCCGAGATGATTATGGTGAGTCTGAGAATATACTGAGGCAATTTGACA
TGAACATGGCCTATGGACCTTGCCTTGGGATGACAAGAATGGAACGATGGGAGCTTGCCCGTAAGCTTGGTTTGAACCCTCCAAAAGAAATTGAGACACTCTTAAAGGGT
GGGAAAGTGCAGTTAGAGTGCTTGTGGGCTTCTCGAATCTAA
mRNA sequenceShow/hide mRNA sequence
GGTCAATGAGAAAAATAAAGGAGACTTTCTTGGGGCATAATTTTTGTGCAATATTGAAAAGGAAATAAAGCATGAAAATTCAAGAAAATAGAATTTAAACCATATTATAT
ATATAAGATAATGATTTAAATAGCAAATATTTTAACTCAAACAAGAAAAAATGTATTTTTGAAAAAAAATATTAATGGGCCGAAGCTCGATCGGGCGCCCGGCCCAGATA
ACATTAGGGTCCATTTAAAGAGAATGGTGCGATTGAATCGACGCTTCAAGAACAAATTCAAATTTTGAAAATCGATCAGAGAGAGAGGGGGAGAAAAATGGCATCGGCTC
GAGGAGGGATGAAAGATTTCTACAAGCAAAGGAAGAACAGTGGAGTCTCTAAGGTTTCAAAGCCCTCTTCTGGGAAAACCAAATCTCGGGCCAGCTCTGCAACTTTGGAC
TCCGATGGCGTTCAACCGGCGGCTCTTATTTCTCACGGTTCCCTCGATCTCCGAGATGATTATGGTGAGTCTGAGAATATACTGAGGCAATTTGACATGAACATGGCCTA
TGGACCTTGCCTTGGGATGACAAGAATGGAACGATGGGAGCTTGCCCGTAAGCTTGGTTTGAACCCTCCAAAAGAAATTGAGACACTCTTAAAGGGTGGGAAAGTGCAGT
TAGAGTGCTTGTGGGCTTCTCGAATCTAAAGACTGCCCTGTTAGCTATGTTATTTTCGGTTAATGTATGAAGTTTATGGTGTGCTTTTGGACAAAATGTTCAGCCTCTGG
CTGAACTCATAAAGTGCTCTTGTTTTCTTTTTTCCTTTGTCATGTTTCGAAAAGAAATCTGTCTACCTTAGTAGCATTTAAAATCTTTGTCAATGTCATAATGGTGGTAG
GGACAGGAATAAAGCAAACAAGGTAGGGACGGGGAATAGTTCATTAAAGTCGGATGACATATTACCGTTGACCTCAGACCTCACACTTGATTTCCTCTCCCTATTGGTCT
CACAATCCCATCGCCTCTTCTCTATCCCATATCCCATAGAAAGGTGGATGCTCTTGTAGGTAGGAGCAACTTCACATATGGTGTTTGGCACTCTCTTCGAACTGATATTA
CCTCGTAAGTTTGGTAAAGCTGCTTGTGCTAACTGTGCACATTGAAAAAAGAAGAAAATTAGAATAGTTTCGGATTCTATTCTGCTTCGAGGATTTGTGCTCAAGAGTAA
ATATCATTCTCTCGTCCCTTACCGGCAAGATTCCCACACAAAAAAAAAAAAAAAAAGTTGGTTGGGTATTATTATTATTATTATTATTGAAAGAACGGGTG
Protein sequenceShow/hide protein sequence
MASARGGMKDFYKQRKNSGVSKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKG
GKVQLECLWASRI