CuGenDBv2

Gene ID	CmaCh02G010590
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	NERD domain-containing protein
Genome location	Cma_Chr02:6329276..6334489
RNA-Seq Expression	CmaCh02G010590
Synteny	CmaCh02G010590
Gene Ontology terms	NA
InterPro domains	IPR011528 - Nuclease-related domain, NERD

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605718.1 hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sororia]

3.0e-173

97.2

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        M+FEILCGFIAFRLLRRFFGQ D LEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGV LPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQW+QLKPE KS+FSGWIKSALRGGKKE+QESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRT+GFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

KAG7035626.1 hypothetical protein SDJN02_02424 [Cucurbita argyrosperma subsp. argyrosperma]

6.7e-173

97.2

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        M+FEILCGFIAFRLLRRFFGQ D LEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGV LPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQW+QLKPE KS+FSGWIKSALRGGKKE+QESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSN MVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]

3.5e-174

97.83

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        M+FEILCGFIAFRLLRRFFGQ D LEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQW+QLKPE KS+FSGWIKSALRGGKKE+QESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_022995191.1 uncharacterized protein LOC111490811 [Cucurbita maxima]

6.2e-179

100

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

XP_023534697.1 uncharacterized protein LOC111796185 [Cucurbita pepo subsp. pepo]

1.9e-172

96.89

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        M+FEILCGFIAFRLLRRFFGQ D LEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKN+SGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQW+QLKPE KS+FSGWIKSALRGGKKE+QESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQ LREIKRSKVSCIVIQKMRTI FGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKG9 NERD domain-containing protein

6.1e-156

86.02

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MW EILCGF+AFR+LRRFF   D +EIET DS+ALFAVASRLEK+Y GK FVGLRIPDADTGLRQSIDMVLVTKGEAVV+ VKNLSGFVS+SADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRW SILESY E+RGVALPEGYLSWKVLLPNPKFRT+HSNYFPSEVI YDQWI LKPE KS+FSGWIKSA  GGKKEMQ+S D
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        +KLNFVLNTAPMWDRLEL GNN+VLGEFLEFK KKEDMQALREI+RSKVSCI+IQK+R IGF PSR RVLYSTR+Y+NEG SASEWKE+T+GS+TMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRK+KISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1DTU9 uncharacterized protein LOC111023945

2.7e-151

82.92

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MW EILCGFIAFR+LRRFF   D +EIE SDSNA+FA ASRLEK+Y G++F+GLRIPDADTG RQSIDMVLVTKG+AVV+ VKNLSG VS+SADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDG Q+SEI+PDPV ETRRWASILESYLE+RGVALPEGYLS KVLLPNPKFRTVH NYFPSEV+TYDQ+IQLKPE KS FSGWIK ALRGGKKEMQES D
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        +KLNFVLNTAPMWDRLELKGNN +LGEF+EFKGKKEDMQALR+IKRSKVSCIVIQ+MR I F PSR RVLYS R+Y+N+G SASEWKE+T+GS+T+VVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKIS+I SLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1H014 uncharacterized protein LOC111459180

1.7e-174

97.83

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        M+FEILCGFIAFRLLRRFFGQ D LEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQW+QLKPE KS+FSGWIKSALRGGKKE+QESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A6J1K1B0 uncharacterized protein LOC111490811

3.0e-179

100

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
        MEYSSKVRKIKISSIVSLSLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

A0A7J7CMM4 Plasma membrane isoform 1

8.3e-129

70.81

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MW EI CG I ++L+RRFF   D L++ETSDSNA+F+VA+RLEK+Y GK +VGLRIPD DTG RQ+IDMVLVTKGEAVV+ VKNL+GFVSV+ DGSW+CE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        GDGR ++E  PDPVAE +R ASILE+YLE+RGVALPEGY S+K++LPNPK RT+HS  FP EVI YDQWIQLKPE KS+FSGWIK ALRGGKKEMQES  
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        +K+NF+LNTAPMWDRLELKGN  VLG+FLEFKGK+ED  ALR IKRSKVS +V+QK    G   S+L+VLYS R+Y++EGTS+SEWKE T+ S+T V+FQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
         E S KVRK K+SS+VS+SLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

1.7e-110

61.18

Show/hide

Query:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE
        MW EI+CG + ++L+RRFF   +  ++ETSDS ALF+VA RLEK+Y GK +VGLRIPDADT  RQ ID+VLVTKG+ VV+ VKNLSG V+V++DGSW+CE
Subjt:  MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICE

Query:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD
        G     +E  PDP+AE ++ AS+LESYLE+RGV L EG +S KV++PNP FRT+H+  FPSEVITY+ W QLKP SKS  SGW+K A   G KEMQES  
Subjt:  GDGRQKSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKD

Query:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ
        +KLNF+L TAP WDR+ELK + +VLGEFLEFKGK+ED  ALR IKRSKV  + IQK    G  PSRL+VLYS R+Y++EG+S +E KE+T+ S+T V+FQ
Subjt:  EKLNFVLNTAPMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQ

Query:  MEYSSKVRKIKISSIVSLSLSA
           S+K++K K+SS+VS+SLSA
Subjt:  MEYSSKVRKIKISSIVSLSLSA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGTTTGAGATACTCTGTGGTTTCATAGCGTTTAGATTGCTCAGACGATTCTTTGGTCAAGGGGATGGATTGGAGATCGAGACCTCTGATTCTAATGCCCTA
TTCGCCGTTGCTTCGAGATTAGAAAAGATTTATAGTGGAAAGATTTTTGTGGGACTTCGAATTCCAGATGCTGACACTGGCTTGCGACAGAGTATTGATATGGTG
CTTGTAACCAAAGGGGAAGCAGTGGTGGTATTGGTAAAAAATCTTTCAGGTTTTGTTTCTGTGAGTGCTGATGGCAGCTGGATCTGTGAAGGCGACGGTAGACAA
AAGTCAGAGATTCTGCCTGATCCGGTGGCTGAGACACGAAGATGGGCCTCAATTCTAGAGTCATACCTTGAGCGGAGAGGAGTTGCACTGCCAGAAGGATATTTG
TCGTGGAAAGTTTTGCTTCCCAACCCAAAATTCCGAACAGTCCATTCAAACTATTTTCCTTCTGAAGTCATCACATATGATCAGTGGATACAGTTGAAACCAGAA
TCAAAAAGCGTGTTCTCTGGTTGGATAAAGAGTGCTCTGCGTGGAGGGAAAAAAGAGATGCAGGAATCGAAGGATGAGAAGCTAAATTTTGTCCTCAACACTGCA
CCCATGTGGGATAGGTTGGAATTAAAAGGAAATAACCTTGTTCTGGGAGAATTCCTGGAGTTCAAAGGGAAGAAAGAAGATATGCAGGCCTTGAGAGAGATCAAA
AGATCAAAAGTTAGTTGCATAGTCATCCAGAAGATGAGAACGATCGGATTTGGTCCTTCAAGACTTCGTGTTTTATACTCTACTCGGAATTATCAAAATGAGGGG
ACCTCTGCTTCCGAGTGGAAGGAAATAACAATAGGATCCAATACAATGGTAGTATTTCAGATGGAATATTCTTCGAAAGTTCGAAAAATCAAGATCTCTTCAATT
GTATCTCTATCACTAAGCGCCTGA

mRNA sequence

Show/hide mRNA sequence

AAGTCTAAGCTTAGAGATTGAAGAGACGCGAGATGTTGTATAGTGATTGATGAAACTTGGGTAAGGTCGAGTCGAAGTGTTTTGAAGGAAGGATGATCGAGAAAT
TTCATAGAGAGCAAATGCAAATTCTTCATTCCTTCTTCTCCTGAACCAACTCCTACTCGGCCTTCGCAAAAATTAGAATCCACATACCCTTTCTAATTCCTGCGA
TCGAGCAAGTTTTCGCTGTGCATAATCGTTGAGGGCGCTGTCATGTGGTTTGAGATACTCTGTGGTTTCATAGCGTTTAGATTGCTCAGACGATTCTTTGGTCAA
GGGGATGGATTGGAGATCGAGACCTCTGATTCTAATGCCCTATTCGCCGTTGCTTCGAGATTAGAAAAGATTTATAGTGGAAAGATTTTTGTGGGACTTCGAATT
CCAGATGCTGACACTGGCTTGCGACAGAGTATTGATATGGTGCTTGTAACCAAAGGGGAAGCAGTGGTGGTATTGGTAAAAAATCTTTCAGGTTTTGTTTCTGTG
AGTGCTGATGGCAGCTGGATCTGTGAAGGCGACGGTAGACAAAAGTCAGAGATTCTGCCTGATCCGGTGGCTGAGACACGAAGATGGGCCTCAATTCTAGAGTCA
TACCTTGAGCGGAGAGGAGTTGCACTGCCAGAAGGATATTTGTCGTGGAAAGTTTTGCTTCCCAACCCAAAATTCCGAACAGTCCATTCAAACTATTTTCCTTCT
GAAGTCATCACATATGATCAGTGGATACAGTTGAAACCAGAATCAAAAAGCGTGTTCTCTGGTTGGATAAAGAGTGCTCTGCGTGGAGGGAAAAAAGAGATGCAG
GAATCGAAGGATGAGAAGCTAAATTTTGTCCTCAACACTGCACCCATGTGGGATAGGTTGGAATTAAAAGGAAATAACCTTGTTCTGGGAGAATTCCTGGAGTTC
AAAGGGAAGAAAGAAGATATGCAGGCCTTGAGAGAGATCAAAAGATCAAAAGTTAGTTGCATAGTCATCCAGAAGATGAGAACGATCGGATTTGGTCCTTCAAGA
CTTCGTGTTTTATACTCTACTCGGAATTATCAAAATGAGGGGACCTCTGCTTCCGAGTGGAAGGAAATAACAATAGGATCCAATACAATGGTAGTATTTCAGATG
GAATATTCTTCGAAAGTTCGAAAAATCAAGATCTCTTCAATTGTATCTCTATCACTAAGCGCCTGAAGATGTCTGGTCAGTGTTATTATTTTTAACTTTGATCAT
AACACTATTGAGGCTTACTGAGTTGAGAAGAACAGCGTTTTTGATACTTTCTTTTTTGTTTATATATATATATATATGGTCTCCCTTCCTTCTTCAATGTGTTTA
TATCATATATCGTCGAGGCTACCTACGTATATGTCTTTGAAACAGTGTATACATACTATTTATTTATATTTGGGCCATTTGTGCTCTTAATATCTATGCTCCC

Protein sequence

Show/hide protein sequence

MWFEILCGFIAFRLLRRFFGQGDGLEIETSDSNALFAVASRLEKIYSGKIFVGLRIPDADTGLRQSIDMVLVTKGEAVVVLVKNLSGFVSVSADGSWICEGDGRQ
KSEILPDPVAETRRWASILESYLERRGVALPEGYLSWKVLLPNPKFRTVHSNYFPSEVITYDQWIQLKPESKSVFSGWIKSALRGGKKEMQESKDEKLNFVLNTA
PMWDRLELKGNNLVLGEFLEFKGKKEDMQALREIKRSKVSCIVIQKMRTIGFGPSRLRVLYSTRNYQNEGTSASEWKEITIGSNTMVVFQMEYSSKVRKIKISSI
VSLSLSA

CmaCh02G010590 (gene) of Cucurbita maxima (Rimu) v1.1 genome