; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G011010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G011010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionR3 MYB transcription factor
Genome locationCma_Chr02:6544424..6545205
RNA-Seq ExpressionCmaCh02G011010
SyntenyCmaCh02G011010
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]4.0e-3379.79Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_022958649.1 transcription factor TRY-like [Cucurbita moschata]2.9e-3686.17Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+QQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]7.7e-3787.23Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_031742154.1 transcription factor TRY [Cucumis sativus]8.8e-3379.79Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+ AK +PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

XP_038875738.1 transcription factor TRY [Benincasa hispida]8.8e-3380.85Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+QAK T LESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY1.9e-3379.79Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A5D3C2B2 Transcription factor TRY1.9e-3379.79Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+QAK +PL+SEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A6J1H5Q3 transcription factor TRY-like1.4e-3686.17Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+QQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

A0A6J1KAI4 transcription factor TRY-like3.7e-3787.23Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

I6NF75 R3 MYB transcription factor4.3e-3379.79Show/hide
Query:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG
        MDNHR+Q+ AK +PLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGD            RWDLIAGRIPGRKPEEIERYWIMTHLEGF  RRRG
Subjt:  MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.2e-1648.31Show/hide
Query:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R+++Q+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+GD            RWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

O22059 Transcription factor CPC4.9e-1853.93Show/hide
Query:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GD            RW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q84RD1 MYB-like transcription factor ETC21.6e-1655.13Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+            RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q8GV05 Transcription factor TRY7.3e-2257.61Show/hide
Query:  DNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        D  R ++Q K    +SEEVSS  W+FI MT QEEDLI RM++L+GD            RWDLIAGR+PGR+PEEIERYWIM + EGFA +RR
Subjt:  DNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

Q9M157 MYB-like transcription factor ETC31.6e-1651.76Show/hide
Query:  MDNHRNQQQAKTTPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  +Q KT  +    SEEVSS  W+ + M+ +EEDL+ RMHKL+GD            RW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRNQQQAKTTPL---ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein1.1e-1755.13Show/hide
Query:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        +SEEVSS  W+FI+MT QEEDLI RM++L+G+            RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT2G30424.1 Homeodomain-like superfamily protein8.6e-1848.31Show/hide
Query:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R+++Q+K T  ++ EV+S +W+FI MT QEEDLI RMH+L+GD            RWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT2G46410.1 Homeodomain-like superfamily protein3.5e-1953.93Show/hide
Query:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        R ++Q+K     SEEVSS  W+ + M+ +EEDLI RM+KL+GD            RW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  RNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR

AT4G01060.2 CAPRICE-like MYB33.2e-1751.19Show/hide
Query:  MDNHRNQQQAKTTPL--ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIM
        MDNHR  +Q KT  +   S EVSS  W+ + M+ +EEDL+ RMHKL+GD            RW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRNQQQAKTTPL--ESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein5.2e-2357.61Show/hide
Query:  DNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR
        D  R ++Q K    +SEEVSS  W+FI MT QEEDLI RM++L+GD            RWDLIAGR+PGR+PEEIERYWIM + EGFA +RR
Subjt:  DNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACCATCGTAACCAGCAACAAGCTAAAACAACTCCACTAGAGTCTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACGATGACAGCACAGGAGGAA
GATCTCATCCATAGAATGCATAAGCTGATTGGAGATAGTATCAAAGTTTCTAAGAAAATGGCTTTCCATTTCAGGTGGGATCTGATAGCAGGCAGAATTCCAGGG
CGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGCAGTGAGAAGAAGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTTTCTCTTTCTCTCTCTAAGATTTCAATATTTTAATCCCTTCTGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAAACCAACAAACTTACTCCC
CAAAGTTTGGTGGGCAGAAGAAAATATAGGAAGCATTCACATAAACTTAAATTTTCCTGTGGAAATTTCAGATCTCTCTATCATAGTTTTTCCTAAAATTCTTTT
CATTCCCAGTTCTCTATCTTCCTGTTTTTGTGCTGCCTCTAATCTTTGGGGGAAACATGGACAACCATCGTAACCAGCAACAAGCTAAAACAACTCCACTAGAGT
CTGAAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACGATGACAGCACAGGAGGAAGATCTCATCCATAGAATGCATAAGCTGATTGGAGATAGTATCAAAGTTT
CTAAGAAAATGGCTTTCCATTTCAGGTGGGATCTGATAGCAGGCAGAATTCCAGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAG
GGTTTGCAGTGAGAAGAAGAGGGTGA
Protein sequenceShow/hide protein sequence
MDNHRNQQQAKTTPLESEEVSSTRWQFITMTAQEEDLIHRMHKLIGDSIKVSKKMAFHFRWDLIAGRIPGRKPEEIERYWIMTHLEGFAVRRRG