CuGenDBv2

Gene ID	CmaCh02G011890
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	Cma_Chr02:7033145..7037835
RNA-Seq Expression	CmaCh02G011890
Synteny	CmaCh02G011890
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0006310 - DNA recombination (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0016740 - transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-177

99.04

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQR
        PDTRRITRSSAH R
Subjt:  PDTRRITRSSAHQR

XP_022957637.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]

2.1e-179

98.74

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQRIGM
        PDTRRITRSSAH RIGM
Subjt:  PDTRRITRSSAHQRIGM

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

2.3e-181

100

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQRIGM
        PDTRRITRSSAHQRIGM
Subjt:  PDTRRITRSSAHQRIGM

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

2.1e-179

100

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQR
        PDTRRITRSSAHQR
Subjt:  PDTRRITRSSAHQR

XP_023533198.1 non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo]

4.7e-179

99.68

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Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQR
        PDTRRITRS+AHQR
Subjt:  PDTRRITRSSAHQR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

1.6e-156

88.89

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP

Query:  PPDTRRITRSSAHQR
        PP+TRR+TRSSA QR
Subjt:  PPDTRRITRSSAHQR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

1.6e-156

88.89

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP

Query:  PPDTRRITRSSAHQR
        PP+TRR+TRSSA QR
Subjt:  PPDTRRITRSSAHQR

A0A6J1GZN9 Non-structural maintenance of chromosomes element 1 homolog

1.0e-179

98.74

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSA+GGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQRIGM
        PDTRRITRSSAH RIGM
Subjt:  PDTRRITRSSAHQRIGM

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

1.1e-181

100

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQRIGM
        PDTRRITRSSAHQRIGM
Subjt:  PDTRRITRSSAHQRIGM

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

1.0e-179

100

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVC

Query:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
        NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP
Subjt:  NEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP

Query:  PDTRRITRSSAHQR
        PDTRRITRSSAHQR
Subjt:  PDTRRITRSSAHQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

6.9e-08

21.15

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Query:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY
        +++  H   +Q L++ G +       L     E    N      ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  +
Subjt:  ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFY

Query:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP
        +  +E I    S  G    I+ L+L  E Q                  S  +K+K + +L     QD+WL    +G   L  R  ++L  +      D+ 
Subjt:  KAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIP

Query:  S-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR
          C VC++  ++ +LC N  C + +H  C   +     +   CP+C   W    P++          +++  Q  SH +
Subjt:  S-CEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

2.0e-10

21.99

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Query:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE
        H   +QAL++ G +       L     E           ++++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E
Subjt:  HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVE

Query:  AIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV
         I    S  G  ++I+ L+L  E Q                  S  +K+K + +L     Q++WL    +G   L  R  ++L  + R    D+   C V
Subjt:  AIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD
        C +  ++++LC N  C + +H  C  K   + K+   CP+C   W    P++           ++  Q  SH + +T   R+
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

2.2e-94

55.38

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +AQG IS+  AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQ
        CNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C  CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S  A+ AS 
Subjt:  CNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQ

Query:  PPPDTRRITRSSAHQR
           +TRR+TRS  H R
Subjt:  PPPDTRRITRSSAHQR

Sequences

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CDS sequence

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ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCTCTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAA
AAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATAT
GATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTT
GAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCAT
GTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTA
AATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGT
AGTAATGAAGGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGA
TCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGA
GATATTGATTCAGGACCAAATGGAGACAGTGTGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACGAGGAGAATAACGCGAAGTTCTGCACACCAGCGAATC
GGAATGTAA

mRNA sequence

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AACTCTTCTCTTCTATGAGTTTGGCTGAAATTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGTTGACCTTGAATTAGGGTTCAGAATGCGGGAG
CTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCTCTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCA
GATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGT
GTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATT
GCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCA
CCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCCGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGT
GTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAA
GGCTGCACTGTTCGTGTACATCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCA
CCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGAT
TCAGGACCAAATGGAGACAGTGTGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACGAGGAGAATAACGCGAAGTTCTGCACACCAGCGAATCGGAATGTAA
AGTGCATTACACAGCGTAAGCCAAAAGTATTATGCTTTTCGGTGGTGTATTGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTACAAAGGTATGCAGC
TCAATGCTGAAAATTTGACCGTTCATATTTACCATGCTTAGATTTAAGGATGAATATATCCACTCTAGAGAAGGAAGTCATAATTAAGCCGTTTAAATAGTGAGA
ACAAATTAGAGCACTCTGGAGAAGTCATCATAGCAGTGACATGAGATAAAAGTGGTGTCTTTGAACTGTTGAGAATAGAATCGATTATGAAACTTTAGATGGTGG
GAAAGTGAAGCAATGAAAAGAATATGGCTAAATGTTTGTCTTTTTATATAATTAAATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTG
TGAAAAGAGAGTTTGATCTAATTAGCATCTCGTGAATGACCTTCAATCATTCCAACTAAGCTGCAGTAGGTTTTCAAAAAAAGAACACATGTTTATGTAACCATC
TAAGTCTATTACTAGTCGATATTGTCTTTTTTGGACTTTTCTTTTCAGGTTTTCCTTCAAGATTTTTAAAACGCGTCTGCTAGAGAGAGTTCAACAATACGCCAG
ACGAAGGATTTAACTTTTACTCTCTTGATCGATGATACGTGTTTTATATCAATTGAATATTGTTCTTATTAGTGGGCTATTCTCACTAGAGAACGAAAGAAACAT
CTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCTTT
TGCCTTGTTTAAACAAGAACAGAATCCAACGTAAAGTCTCAATTCAAAAAGGCATAACCATTTTGCCATGTATTATCTGTCTATTATTATAAAGTATGAGTAAAT
ATTCGTCCTTCTCCTGTACTATTTTCTCAGGTACTATTATAATCAAAACCAAC

Protein sequence

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MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIV
EAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELC
SNEGCTVRVHRYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPPPDTRRITRSSAHQRI
GM

CmaCh02G011890 (gene) of Cucurbita maxima (Rimu) v1.1 genome