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CmaCh02G013330 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G013330
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionflagellar radial spoke protein 5 isoform X1
Genome locationCma_Chr02:7801825..7803148
RNA-Seq ExpressionCmaCh02G013330
SyntenyCmaCh02G013330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035942.1 hypothetical protein SDJN02_02742, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2794.03Show/hide
Query:  MYYGVKWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVSPSVKMTISYVR
        MYYGV+WQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQ  LTKWV PSVKMTISYVR
Subjt:  MYYGVKWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVSPSVKMTISYVR

XP_021278876.1 flagellar radial spoke protein 5 isoform X1 [Herrania umbratica]8.0e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

XP_021278880.1 flagellar radial spoke protein 5 isoform X5 [Herrania umbratica]8.0e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

XP_022943505.1 flagellar radial spoke protein 5 isoform X1 [Cucurbita moschata]8.0e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

XP_023513304.1 flagellar radial spoke protein 5 isoform X1 [Cucurbita pepo subsp. pepo]8.0e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

TrEMBL top hitse value%identityAlignment
A0A5J5C875 Aldo_ket_red domain-containing protein3.9e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

A0A6J0ZW23 flagellar radial spoke protein 5 isoform X53.9e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

A0A6J0ZWD4 flagellar radial spoke protein 5 isoform X13.9e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

A0A6J1DHY1 flagellar radial spoke protein 5 isoform X15.1e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D  VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

A0A6J1FXW3 flagellar radial spoke protein 5 isoform X13.9e-1455.56Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG GRID D+ VEAMLRYADAGLSTFDMAD                              LTKWV P VKMT SYVRESI
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27680.1 NAD(P)-linked oxidoreductase superfamily protein2.0e-1547.78Show/hide
Query:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI
        +VLNG+WQ+SGG G+ID ++ V++MLRYADAGLSTFDMAD                              LTKWV P +KMT SYVR++I
Subjt:  QVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQC---------------------------TLTKWVSPSVKMTISYVRESI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTACGGTGTCAAATGGCAAGTGCTCAACGGAATATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTAGAGGCTATGCTCCGATATGCCGA
CGCCGGACTTTCAACCTTCGATATGGCCGACCAGTGTACGCTTACAAAATGGGTGTCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGAAAGCATTAGGCAAGGCT
GTACTTCAATGCTGCTCTTGCCATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTACGGTGTCAAATGGCAAGTGCTCAACGGAATATGGCAGTCCAGCGGAGGAAGGGGGAGAATCGACTGTGACAATAGGGTAGAGGCTATGCTCCGATATGCCGA
CGCCGGACTTTCAACCTTCGATATGGCCGACCAGTGTACGCTTACAAAATGGGTGTCACCGTCGGTGAAGATGACTATTAGCTATGTCCGGGAAAGCATTAGGCAAGGCT
GTACTTCAATGCTGCTCTTGCCATCTTAGATTTGTGGAGTGAACTTTGAAAATTATAAGGCATGGATTTTTCTTGAAGGATCAATGAGAATCAATGAATTGAATCTATAA
TTTGACCATGGAACTCATCTAGGCAGTTATCAAGGTGGAATTATTCG
Protein sequenceShow/hide protein sequence
MYYGVKWQVLNGIWQSSGGRGRIDCDNRVEAMLRYADAGLSTFDMADQCTLTKWVSPSVKMTISYVRESIRQGCTSMLLLPS