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CmaCh02G013360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G013360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description60S acidic ribosomal protein family
Genome locationCma_Chr02:7832702..7834432
RNA-Seq ExpressionCmaCh02G013360
SyntenyCmaCh02G013360
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570492.1 60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4392.17Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDE+RI+SLL+QVKGKDITELI SGREKLASVPSGGGAV +AA AGGAAGGGAAPAAAE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

KAG6605995.1 60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4595.61Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVD +RINSLLTQVKGKDITELI SGREKLASVPSGGGAVAVAA AGGAAGGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_022957717.1 60S acidic ribosomal protein P2B-like [Cucurbita moschata]2.5e-4595.61Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVD +RINSLLTQVKGKDITELI SGREKLASVPSGGGAVAVAA AGGAAGGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_022996218.1 60S acidic ribosomal protein P2B-like [Cucurbita maxima]3.7e-49100Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_023532554.1 60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo]1.8e-4392.98Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVD + INSLLTQVKGKDITELI SGREKLASVPSGGGAVAVAA AG A GGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1DJB9 60S acidic ribosomal protein P2B-like2.7e-4290.43Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAA-EKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK ILNSVG EVDE+RI SLL+QVKGKDITELI SGREKLASVPSGGGAVAVAA AGGAAGGGAAPAAA EKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAA-EKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKE+SDDD+GFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1FYH3 60S acidic ribosomal protein P2B-like4.2e-4391.3Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDE+RI+SLL+QVKGKDITELI SGREKLASVPSGGGAV +AA AGG AGGGAAPAAAE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZW9 60S acidic ribosomal protein P2B-like1.2e-4595.61Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVD +RINSLLTQVKGKDITELI SGREKLASVPSGGGAVAVAA AGGAAGGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A6J1J9Z4 60S acidic ribosomal protein P2B-like4.2e-4391.3Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDE+RI+SLL+QVKGKDITELI SGREKLASVPSGGGAV +AA AGGAAGGGAAPAA E KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAE-KKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1KA82 60S acidic ribosomal protein P2B-like1.8e-49100Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B2.6e-3472.81Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKV+AAYLLAVLGGNTSP  DDVK IL SVGAE DE ++  LLT++K KDITE+I +GRE+L+SVPSGGGA+ + A A   AGGGAAPA   KKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESD+DMGFSLFD
Subjt:  KEESDDDMGFSLFD

P41099 60S acidic ribosomal protein P21.2e-2970.94Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAA---EKKEEK
        MKV+AA+LLA+LGGNTSP  +D+K IL SVGA+ D+++I  LL+QVKGKDITELI SGRE+LASVPSGGG VAVAA AGG  GGG APAAA    KKEEK
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAA---EKKEEK

Query:  VEEKEESDDDMGFSLFD
         E  EESD+++GFSLFD
Subjt:  VEEKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A8.5e-3372.81Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MK VAAYLLAVL GN SP  DD+  IL SVG EVD  ++  LL+Q+ GKDITELI +GREK ASVP GGG VAVAA A   A GGAAPAA  KKEEKVEE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-13.6e-3168.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG APAA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-21.4e-3068.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG A AA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family9.7e-3268.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG A AA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family9.7e-3268.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG A AA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family9.7e-3268.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG A AA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family2.5e-3268.7Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++++I  LL +VKGKD+ ELI +GREKLASVPS GGG VAVA+   G  GGG APAA  KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPS-GGGAVAVAATAGGAAGGGAAPAAAEKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family1.8e-3066.67Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE
        MKV AA+LLAVLGGN +P  D++K I+ +VGA+VD   I  LL +V GKDI ELI SGREKLASVPSGGG   VA +A  ++GGG A A AEKKE K EE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLF+
Subjt:  KEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTCGCTGCATATCTGTTGGCCGTACTCGGTGGCAACACCAGCCCCGGACTTGATGATGTGAAGTATATTCTTAATTCAGTCGGGGCCGAGGTCGATGAGAA
CAGGATTAACTCGCTATTAACCCAAGTGAAAGGAAAAGATATCACCGAGTTGATAACTTCCGGACGGGAGAAATTGGCGTCAGTGCCGTCTGGTGGCGGGGCAGTCGCCG
TCGCCGCCACTGCCGGTGGTGCCGCTGGTGGTGGTGCAGCACCAGCCGCAGCCGAGAAGAAAGAGGAGAAGGTCGAGGAGAAAGAAGAATCCGACGATGACATGGGTTTC
AGCCTCTTTGATTAA
mRNA sequenceShow/hide mRNA sequence
TCTTGGTTGCAGCTTCTGTTTCGAGCTTCTCAAAGATGAAGGTGGTCGCTGCATATCTGTTGGCCGTACTCGGTGGCAACACCAGCCCCGGACTTGATGATGTGAAGTAT
ATTCTTAATTCAGTCGGGGCCGAGGTCGATGAGAACAGGATTAACTCGCTATTAACCCAAGTGAAAGGAAAAGATATCACCGAGTTGATAACTTCCGGACGGGAGAAATT
GGCGTCAGTGCCGTCTGGTGGCGGGGCAGTCGCCGTCGCCGCCACTGCCGGTGGTGCCGCTGGTGGTGGTGCAGCACCAGCCGCAGCCGAGAAGAAAGAGGAGAAGGTCG
AGGAGAAAGAAGAATCCGACGATGACATGGGTTTCAGCCTCTTTGATTAAGCAACTCTTTAGTTGACGTTATCAGTTAGTGCTTTAGTTTACTTTCGTTCAAGCTTCCGA
GCTGTGTAGCTTGGTAGGTGTTTTTCACTTTAACTTCATTAATACTCACAAATTTTGATAGATGAAAGTGCAATTTTCAGTTTGAACTTTTCAGCGATTACAGTCATTTG
ACTTGCGTGATTTATGATTCCCGTCTCATTTCAATATGCATGATTAATTTAGAGTATGCTAACTCTCACACTGTTTCTATTGTTTCACTCTATTTGATGCGTGTGCTATT
TGCACTTAGAAAATATGCACCACTTTTTATCTGCTGTCAATCCTAGGCCTATATGCCTTCTTGCCTTCTAATATATGCATCATGCCAGGATCAATTGATTTTAGGATCTT
AATGGATTGTGCATTTGGTTTGCACTTTTCATGACATTTGAAAGATTGGGTTATCATACCAACATTCTGGTCTCTGGTCTCTGGTCTCTGGTCTCGATAAATTTAGTTTC
TATACTTTCAGTAAATCTTATCTAGTCTCATCTTATTCTTTTCAGAAATCAGTTACTCTCTTTTGGGTGTTTTGTTTTTCATGAAGGGTCTCTTCTCTCGGACAGTAGAA
CCACTAATTTTGTACATTTGAAAGTTTAAAGGAACAAAATAGAATTGATCATTATTTGGTTTTAGGGACCTAAATAGATTGTTGTTTATTCGATAAGTTATTTCCCGATG
TCGTATATCTATATTATGGGAAGTATTATGTCACCCTTTTGTCTTTTGCTGCTGCCTTCTTCCGTTTTCCTTCCTTATTCCTTATTCCTTTCCATCTTTGACTTTACGAG
TCTTCCTTCTTCCTTACCATCTTTGACTAAATGAAACGTTCTTGCTGGTATGATCATTTATGTCCTATAACATGAAAACAC
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDENRINSLLTQVKGKDITELITSGREKLASVPSGGGAVAVAATAGGAAGGGAAPAAAEKKEEKVEEKEESDDDMGF
SLFD