CuGenDBv2

Gene ID	CmaCh02G013790
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
Genome location	Cma_Chr02:8030729..8032472
RNA-Seq Expression	CmaCh02G013790
Synteny	CmaCh02G013790
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK24180.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X2 [Cucumis melo var. makuwa]

2.2e-42

51.53

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Query:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--
        +FELQDFIHGD+ D YVNLI   +E PI   NFD+D++NGCL     V   ++ ++DSN++++SDPNS         S+ +         DE+E  SV  
Subjt:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--

Query:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------LDVFQVEETGFYLRLVCKMGERVAMSVYM----------------------------
         + T +KK K DR+RTL+SE RRRGRMKEKLYAL SL      LDVFQVEE GFYLRLVCKMGERVAMS+Y                             
Subjt:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------LDVFQVEETGFYLRLVCKMGERVAMSVYM----------------------------

Query:  -VRACDVDMNLPSLKLWLTGALPNHGFEF
         VR C+VDMNLP+LKLWLTGAL NHGFEF
Subjt:  -VRACDVDMNLPSLKLWLTGALPNHGFEF

XP_004145819.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Cucumis sativus]

1.8e-36

40.27

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Query:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCLVGNGV-----DPMLDSNILISSDPNS---------SLCRRRRDENE-------YSSVT
        +FELQDFIHGD+ D+YVNLI   +E PI   NFD+D+MNGCL+ N V     + ++DSN++++SDPNS         S+ +   DE+E         + +
Subjt:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCLVGNGV-----DPMLDSNILISSDPNS---------SLCRRRRDENE-------YSSVT

Query:  MTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------
         T +KK K DR+RTL+SE RRRGRMKEKLYAL SL                                                                 
Subjt:  MTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------

Query:  -------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
               LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C+VDMNLP+LKLWLTGAL NHGFEF
Subjt:  -------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

XP_022943777.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Cucurbita moschata]

6.8e-36

41.1

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Query:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM
        + EFELQDFIHGD+ D+YVNLI    ENPI  N D+D+MN   V N +DP    +LDSNI+++SDPNS         S+ +   +E+E        + ++
Subjt:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM

Query:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------
        T +KK+KVDRSRTL+SE RRRGRMKEKLYAL SL                                                                  
Subjt:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------

Query:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
              LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C++DMNLP+LKLWLTGAL NHGFEF
Subjt:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

XP_022986352.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like [Cucurbita maxima]

5.8e-35

40.75

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Query:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM
        + EFELQD IHGD+ D+YVNLI    ENPI  N D+D+MN   V N +DP    +LDSNI+++SDPNS         S+ +    E+E        + ++
Subjt:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM

Query:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------
        T +KK+KVDRSRTL+SE RRRGRMKEKLYAL SL                                                                  
Subjt:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------

Query:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
              LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C++DMNLP+LKLWLTGAL NHGFEF
Subjt:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

XP_038902250.1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Benincasa hispida]

4.4e-35

40.61

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Query:  EFELQDFIHGDSLDEYVNLI---HENPII-NFDVDYMNGCLVGNGVDP----MLDSNILI--SSDPNS---------SLCRRRRDENE-------YSSVT
        +FELQDFIHGD+ D+YVNLI   HEN I  NFD D+MN  LV NG DP    ++DSN+++  +SDPNS         S+ +   +++E        +S +
Subjt:  EFELQDFIHGDSLDEYVNLI---HENPII-NFDVDYMNGCLVGNGVDP----MLDSNILI--SSDPNS---------SLCRRRRDENE-------YSSVT

Query:  MTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------
         T +KK KVDR+RTL+SE RRRGRMKEKLYAL SL                                                                 
Subjt:  MTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------

Query:  -------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
               LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C+V+MNLP+LKLWLTGAL NHGFEF
Subjt:  -------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T764 Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X1

4.8e-35

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Query:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--
        +FELQDFIHGD+ D YVNLI   +E PI   NFD+D++NGCL     V   ++ ++DSN++++SDPNS         S+ +         DE+E  SV  
Subjt:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--

Query:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------------
         + T +KK K DR+RTL+SE RRRGRMKEKLYAL SL                                                               
Subjt:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------------

Query:  ---------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
                 LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C+VDMNLP+LKLWLTGAL NHGFEF
Subjt:  ---------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

A0A5D3DLN4 Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR isoform X2

1.1e-42

51.53

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Query:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--
        +FELQDFIHGD+ D YVNLI   +E PI   NFD+D++NGCL     V   ++ ++DSN++++SDPNS         S+ +         DE+E  SV  
Subjt:  EFELQDFIHGDSLDEYVNLI---HENPII--NFDVDYMNGCL-----VGNGVDPMLDSNILISSDPNS---------SLCR------RRRDENEYSSV--

Query:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------LDVFQVEETGFYLRLVCKMGERVAMSVYM----------------------------
         + T +KK K DR+RTL+SE RRRGRMKEKLYAL SL      LDVFQVEE GFYLRLVCKMGERVAMS+Y                             
Subjt:  -TMTATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------LDVFQVEETGFYLRLVCKMGERVAMSVYM----------------------------

Query:  -VRACDVDMNLPSLKLWLTGALPNHGFEF
         VR C+VDMNLP+LKLWLTGAL NHGFEF
Subjt:  -VRACDVDMNLPSLKLWLTGALPNHGFEF

A0A6J1CGE1 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR

3.6e-35

40.97

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Query:  MKEFELQDFIHGDSLDEYVNLIH---ENPIINFDVDYMNGCLVGNGVDPMLDSNILISSDPNS---------SLCRRRRDEN------EYSSVTMTATKK
        + +FELQDFIHGD+ D+YVNLI    ENP  NFD++Y            MLDSNI+++SDPNS         S+ R   DE+      E SS+T T TKK
Subjt:  MKEFELQDFIHGDSLDEYVNLIH---ENPIINFDVDYMNGCLVGNGVDPMLDSNILISSDPNS---------SLCRRRRDEN------EYSSVTMTATKK

Query:  AKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------------
         KVDRSRTL+SE RRRGRMKEKLYAL SL                                                                       
Subjt:  AKVDRSRTLVSE-RRRGRMKEKLYALHSL-----------------------------------------------------------------------

Query:  --LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
          LDVFQVEE GFYLR+VCKMGE VAMS+Y                              VR C+VDMNLP++KLWLTGAL NHGFEF
Subjt:  --LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

A0A6J1FTZ6 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like

3.3e-36

41.1

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Query:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM
        + EFELQDFIHGD+ D+YVNLI    ENPI  N D+D+MN   V N +DP    +LDSNI+++SDPNS         S+ +   +E+E        + ++
Subjt:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM

Query:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------
        T +KK+KVDRSRTL+SE RRRGRMKEKLYAL SL                                                                  
Subjt:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------

Query:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
              LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C++DMNLP+LKLWLTGAL NHGFEF
Subjt:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

A0A6J1J7B0 transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like

2.8e-35

40.75

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Query:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM
        + EFELQD IHGD+ D+YVNLI    ENPI  N D+D+MN   V N +DP    +LDSNI+++SDPNS         S+ +    E+E        + ++
Subjt:  MKEFELQDFIHGDSLDEYVNLIH---ENPII-NFDVDYMNGCLVGNGVDP----MLDSNILISSDPNS---------SLCRRRRDENE------YSSVTM

Query:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------
        T +KK+KVDRSRTL+SE RRRGRMKEKLYAL SL                                                                  
Subjt:  TATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL------------------------------------------------------------------

Query:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF
              LDVFQVEE GFYLRLVCKMGERVAMS+Y                              VR C++DMNLP+LKLWLTGAL NHGFEF
Subjt:  ------LDVFQVEETGFYLRLVCKMGERVAMSVYM-----------------------------VRACDVDMNLPSLKLWLTGALPNHGFEF

SwissProt top hits

e value

%identity

Alignment

Q0V7X4 Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR

9.6e-17

29.7

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Query:  MKEFELQDFIHGDSLDEYVNLIH-------ENPIINFDVDYMNG--CLVGNG------VD------PMLDSNI---LISSDPNSSLCRRRRDENEY----
        + + EL +F+   + D+++NLI        ENP+++FD+  +    C +         VD      P LDSN+     S D +S       DE +Y    
Subjt:  MKEFELQDFIHGDSLDEYVNLIH-------ENPIINFDVDYMNG--CLVGNG------VD------PMLDSNI---LISSDPNSSLCRRRRDENEY----

Query:  -SSVTMT---ATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------
         SS T T    T+K K DRSRTL+SE RRRGRMK+KLYAL SL                                                         
Subjt:  -SSVTMT---ATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------

Query:  ----------------LDVFQVEETGFYLRLVCKMGERVAMSVY-----------------------------MVRAC-DVDMNLPSLKLWLTGALPNHG
                        +DV QVEE GFY+RLVC  GE VA S+Y                             +   C +  +NLP+LKLW+TG+L N G
Subjt:  ----------------LDVFQVEETGFYLRLVCKMGERVAMSVY-----------------------------MVRAC-DVDMNLPSLKLWLTGALPNHG

Query:  FEF
        FEF
Subjt:  FEF

Arabidopsis top hits

e value

%identity

Alignment

AT2G28160.1 FER-like regulator of iron uptake

6.8e-18

29.7

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Query:  MKEFELQDFIHGDSLDEYVNLIH-------ENPIINFDVDYMNG--CLVGNG------VD------PMLDSNI---LISSDPNSSLCRRRRDENEY----
        + + EL +F+   + D+++NLI        ENP+++FD+  +    C +         VD      P LDSN+     S D +S       DE +Y    
Subjt:  MKEFELQDFIHGDSLDEYVNLIH-------ENPIINFDVDYMNG--CLVGNG------VD------PMLDSNI---LISSDPNSSLCRRRRDENEY----

Query:  -SSVTMT---ATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------
         SS T T    T+K K DRSRTL+SE RRRGRMK+KLYAL SL                                                         
Subjt:  -SSVTMT---ATKKAKVDRSRTLVSE-RRRGRMKEKLYALHSL---------------------------------------------------------

Query:  ----------------LDVFQVEETGFYLRLVCKMGERVAMSVY-----------------------------MVRAC-DVDMNLPSLKLWLTGALPNHG
                        +DV QVEE GFY+RLVC  GE VA S+Y                             +   C +  +NLP+LKLW+TG+L N G
Subjt:  ----------------LDVFQVEETGFYLRLVCKMGERVAMSVY-----------------------------MVRAC-DVDMNLPSLKLWLTGALPNHG

Query:  FEF
        FEF
Subjt:  FEF

Sequences

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CDS sequence

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ATGAAGGAGTTTGAGCTCCAAGATTTCATCCATGGAGACAGCTTGGATGAATATGTGAATCTCATTCATGAAAATCCCATCATCAACTTTGATGTTGATTACATGAATGG
CTGCTTGGTGGGGAATGGTGTGGATCCAATGCTTGATTCCAACATCCTCATCAGTTCTGATCCTAATTCTTCGTTATGTCGAAGACGACGCGACGAAAACGAGTACTCTT
CTGTCACAATGACTGCAACAAAGAAGGCAAAGGTGGACAGATCCAGAACTTTGGTTTCTGAGCGGAGGAGGGGAAGGATGAAGGAAAAGCTTTATGCATTGCATTCATTG
CTGGATGTGTTCCAAGTGGAGGAAACAGGGTTTTATTTAAGGCTGGTCTGCAAGATGGGTGAAAGAGTAGCCATGTCTGTATACATGGTGAGGGCCTGTGATGTGGACAT
GAACTTGCCAAGTCTGAAGCTTTGGCTTACTGGGGCACTTCCTAACCATGGATTTGAGTTTTAA

mRNA sequence

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Protein sequence

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MKEFELQDFIHGDSLDEYVNLIHENPIINFDVDYMNGCLVGNGVDPMLDSNILISSDPNSSLCRRRRDENEYSSVTMTATKKAKVDRSRTLVSERRRGRMKEKLYALHSL
LDVFQVEETGFYLRLVCKMGERVAMSVYMVRACDVDMNLPSLKLWLTGALPNHGFEF

CmaCh02G013790 (gene) of Cucurbita maxima (Rimu) v1.1 genome