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CmaCh02G014000 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G014000
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionGamma-tubulin isoform 1
Genome locationCma_Chr02:8117503..8117790
RNA-Seq ExpressionCmaCh02G014000
SyntenyCmaCh02G014000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042696.1 hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa]1.9e-2771.59Show/hide
Query:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MS     R +MIG+E  Q+       SK LD FQMPLHYP+YKRSDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPCEMY
Subjt:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

KAE8647840.1 hypothetical protein Csa_000107 [Cucumis sativus]2.8e-2670.11Show/hide
Query:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM
        MS     R +MIG+E  Q+       SK  D FQMPLHYP+Y+RSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWPCE+
Subjt:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM

KAG6606051.1 hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4192.39Show/hide
Query:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MSRIMSWVY  R A+IGAEQP QQQQQRVISKQ DHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Subjt:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

KAG7035999.1 hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4192.47Show/hide
Query:  MSRIMSWVYTGRYAMIGAEQP-QQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MSRIMSWVY  R A+IGAEQP QQQQQQRVISKQ DHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Subjt:  MSRIMSWVYTGRYAMIGAEQP-QQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

XP_022958391.1 uncharacterized protein LOC111459627 [Cucurbita moschata]1.4e-4192.39Show/hide
Query:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MSRIMSWV   R A+IGAEQPQQQQQQRVISKQ DHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Subjt:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

TrEMBL top hitse value%identityAlignment
A0A0A0KMG0 Uncharacterized protein3.8e-2971.74Show/hide
Query:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MS IMS     R +MIG+E  Q+       SK  D FQMPLHYP+Y+RSDYEGM EWKLDCLLKEYGLPV GDVAQKRKFAMGAFLWPCEMY
Subjt:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

A0A5D3C447 Uncharacterized protein9.3e-2871.59Show/hide
Query:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MS     R +MIG+E  Q+       SK LD FQMPLHYP+YKRSDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPCEMY
Subjt:  MSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

A0A6I9T0H3 uncharacterized protein LOC1051585211.3e-2165.82Show/hide
Query:  GAEQPQQQQQQRVISKQLD----HFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM
        G  +P   QQQ+++S  ++     FQMPLHYP+YK+SDYE M EW+LDCLLKEYGLPVAGDV QKRKFAMGAFLWP ++
Subjt:  GAEQPQQQQQQRVISKQLD----HFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM

A0A6J1CXF4 uncharacterized protein LOC1110153215.1e-2676.62Show/hide
Query:  IGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        IG     +QQQQRV SKQ   FQMPLHYP+YK+SDYE M EWKLDCLLKEYGLP+ GDVAQKRKFAMGAFLWPC+ Y
Subjt:  IGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

A0A6J1H1Y5 uncharacterized protein LOC1114596276.7e-4292.39Show/hide
Query:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY
        MSRIMSWV   R A+IGAEQPQQQQQQRVISKQ DHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWP EMY
Subjt:  MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein3.2e-1255.56Show/hide
Query:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGD--VAQKRKFAMGAFLWP
        F+MPLHYP+Y + DYE M EW+LD LL EYGL    D  + +KR FA+  F+WP
Subjt:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGD--VAQKRKFAMGAFLWP

AT3G11405.1 unknown protein6.0e-1151.67Show/hide
Query:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPV-AGDVAQKRKFAMGAFLWPCEMYGSL
        FQMPL YP Y +  Y+ M+E +LD LLK YGLP   G+++ K++FA+GAFLW   +  SL
Subjt:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPV-AGDVAQKRKFAMGAFLWPCEMYGSL

AT3G55570.1 unknown protein3.1e-1562.75Show/hide
Query:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLW
        F+MPLHYP+Y + DY+ M EWKLD +L +YGL   GD+A KR FA+GAFLW
Subjt:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLW

AT5G41761.1 unknown protein1.0e-1868.97Show/hide
Query:  QLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCE
        Q   FQ+PLHYPKY +SDYE M EW+LD LL+EYGLPV GD  +KRKFA+GAFLW  E
Subjt:  QLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCE

AT5G55620.1 unknown protein4.9e-1354.55Show/hide
Query:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM
        FQ+PLHYPKY +SDYE M + +LD LLK+YG    G +  KR FA+ +FLWP ++
Subjt:  FQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAATAATGAGCTGGGTCTATACTGGTCGGTACGCCATGATCGGGGCCGAGCAGCCGCAGCAGCAGCAACAGCAGCGAGTGATCAGCAAGCAGTTGGATCATTT
TCAGATGCCTCTTCACTACCCAAAGTACAAGAGGAGTGACTATGAGGGCATGGCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATATGGCCTCCCGGTGGCTGGAGACG
TCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTTCTTTGGCCTTGTGAAATGTACGGATCGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGAATAATGAGCTGGGTCTATACTGGTCGGTACGCCATGATCGGGGCCGAGCAGCCGCAGCAGCAGCAACAGCAGCGAGTGATCAGCAAGCAGTTGGATCATTT
TCAGATGCCTCTTCACTACCCAAAGTACAAGAGGAGTGACTATGAGGGCATGGCGGAGTGGAAACTGGACTGCCTTCTCAAAGAATATGGCCTCCCGGTGGCTGGAGACG
TCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTTCTTTGGCCTTGTGAAATGTACGGATCGTTATGA
Protein sequenceShow/hide protein sequence
MSRIMSWVYTGRYAMIGAEQPQQQQQQRVISKQLDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPCEMYGSL