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CmaCh02G014010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G014010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionarabinogalactan peptide 22-like
Genome locationCma_Chr02:8118724..8120024
RNA-Seq ExpressionCmaCh02G014010
SyntenyCmaCh02G014010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1472Show/hide
Query:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS
        M VVA  K+P+GV + V FVLAML PA A   SL+PAQPP ASDGTS+DQGIAYVLMLLAL+LTYIIH A+L IS
Subjt:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS

KAG6606052.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1995.24Show/hide
Query:  LVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        L+AVAF LAMLFPASAADP LSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  LVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

KAG7036000.1 Arabinogalactan peptide 20 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2697.37Show/hide
Query:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAY KVPYGVLVAVAF LAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]6.8e-28100Show/hide
Query:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

XP_023532560.1 arabinogalactan peptide 20-like [Cucurbita pepo subsp. pepo]4.4e-2798.68Show/hide
Query:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAY KVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein1.2e-0966.23Show/hide
Query:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  KVP+ G+L  VA VL  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLLAL+LTYIIH A+L +SL
Subjt:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A1S3ATI9 arabinogalactan peptide 22-like1.2e-0964.94Show/hide
Query:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  K+P+ G+L  VA VL  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A5D3C2F1 Arabinogalactan peptide 22-like1.2e-0964.94Show/hide
Query:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        M VVA  K+P+ G+L  VA VL  L PA A   SLSPAQPP  SDGTS+DQGIAY LMLLAL+LTYIIH A+  +SL
Subjt:  MEVVAYIKVPY-GVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

A0A6J1CXM0 arabinogalactan peptide 22-like7.7e-0964.79Show/hide
Query:  VPYGVL--VAVAFVLAMLFP--ASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS
        +P G+L  VAVAFVL    P  A A   S+SPAQP   SDGTS+DQGIAY LMLLAL+LTYIIH A+L IS
Subjt:  VPYGVL--VAVAFVLAMLFP--ASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPIS

A0A6J1K4A3 arabinogalactan peptide 22-like3.3e-28100Show/hide
Query:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
        MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL
Subjt:  MEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIHLAELPISL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 164.9e-0556.86Show/hide
Query:  AFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +FV A++   + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  AFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q8L9T8 Arabinogalactan protein 413.4e-0655.17Show/hide
Query:  YGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +GV   V+ + A+L P + A  S +PA  P  SDGT++DQGIAYVLML+AL+LTY+IH
Subjt:  YGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q9FK16 Arabinogalactan protein 223.8e-0550.77Show/hide
Query:  VAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +A +K P  +L     +  +L P  A   S SPA  P  SDGTS+DQGIAYVLM++AL LTY IH
Subjt:  VAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Q9M373 Arabinogalactan protein 205.8e-0657.14Show/hide
Query:  VLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        V+   AFV A++ P + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  VLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 163.5e-0656.86Show/hide
Query:  AFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +FV A++   + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  AFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT3G61640.1 arabinogalactan protein 204.2e-0757.14Show/hide
Query:  VLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        V+   AFV A++ P + A  SL+PA  P  SDGTS+DQGIAY+LM++AL+LTY+IH
Subjt:  VLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT5G24105.1 arabinogalactan protein 412.4e-0755.17Show/hide
Query:  YGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +GV   V+ + A+L P + A  S +PA  P  SDGT++DQGIAYVLML+AL+LTY+IH
Subjt:  YGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH

AT5G53250.1 arabinogalactan protein 222.7e-0650.77Show/hide
Query:  VAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH
        +A +K P  +L     +  +L P  A   S SPA  P  SDGTS+DQGIAYVLM++AL LTY IH
Subjt:  VAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLMLLALLLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGGGCCTCAAAATGACCGAGTCGCGTGGGGAAACATGCAGTAGCTGCAACATTTCCGGCCATGCCGTTCGAAGCATGCAGCGGTCTCTCTCTCCTGCGCCTCT
CCGGAGAGGGAGATTAATTGTCGTCGAACACTACATACCAATAACAATGGAGGTCGTTGCTTATATTAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGTTTTGG
CTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTG
TTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGGGCCTCAAAATGACCGAGTCGCGTGGGGAAACATGCAGTAGCTGCAACATTTCCGGCCATGCCGTTCGAAGCATGCAGCGGTCTCTCTCTCCTGCGCCTCT
CCGGAGAGGGAGATTAATTGTCGTCGAACACTACATACCAATAACAATGGAGGTCGTTGCTTATATTAAGGTCCCTTATGGCGTTTTAGTCGCTGTTGCTTTTGTTTTGG
CTATGCTTTTCCCTGCCTCCGCCGCTGATCCTTCTTTGTCTCCAGCCCAACCTCCCATTGCTAGCGATGGGACGAGCTTAGACCAAGGAATAGCGTACGTGCTGATGTTG
TTGGCGTTGCTGCTAACTTACATTATTCATTTAGCAGAGCTTCCAATCAGTTTGTAAAATTAGTGCACAAAATGATTAAATTCAATCCCGAGAGCTCCAATGTAAAAAGG
TGTCATCATTTTGATAGAATTCAGTCCCAAATAAGACAATGTCTCCTACAAATGGAAACTTCAATTGCTTCCTTCAAGTGCTCTTCTTACCACTTGGTTTTGCTCGTTCT
TCATCAGCCAACGAGAACTTTTTCACTTTCTGGCGAAGGATGAAGCAACAAATTCAAGGAAAAGAAAACAACAGTTACATTTTGTTGCTTATACAGCAAATATGAATATG
AATGTGAAGCAAGTGTTAAGCGTTTAAGTGAATCTATGTAATCTATGTGCCTGGAATGTTGAGGACAAAAAGTTCAAGCCAATCCGAACAAAAAATCAAATCAAGAAACC
ACGCGTTTGAGTATTTTAATCAGCGTTGCAGTGAGAAGTGAATTACAATTACCTGCCATATCCTAAATTGTGAAACCAAAGATCATTCCAG
Protein sequenceShow/hide protein sequence
MDEGLKMTESRGETCSSCNISGHAVRSMQRSLSPAPLRRGRLIVVEHYIPITMEVVAYIKVPYGVLVAVAFVLAMLFPASAADPSLSPAQPPIASDGTSLDQGIAYVLML
LALLLTYIIHLAELPISL