CuGenDBv2

Gene ID	CmaCh02G016310
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Lysine-specific demethylase JMJ706-like protein
Genome location	Cma_Chr02:9232531..9237656
RNA-Seq Expression	CmaCh02G016310
Synteny	CmaCh02G016310
Gene Ontology terms	GO:0010468 - regulation of gene expression (biological process) GO:0032259 - methylation (biological process) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0038556.1 lysine-specific demethylase JMJ706-like protein [Cucumis melo var. makuwa]

4.7e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

TYK31188.1 lysine-specific demethylase JMJ706-like protein [Cucumis melo var. makuwa]

4.7e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

XP_011652637.1 lysine-specific demethylase JMJ706 isoform X1 [Cucumis sativus]

8.0e-05

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQ+E HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

XP_016903491.1 PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase JMJ706-like [Cucumis melo]

4.7e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

XP_031738883.1 lysine-specific demethylase JMJ706 isoform X3 [Cucumis sativus]

8.0e-05

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQ+E HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LHZ2 Uncharacterized protein

3.9e-05

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQ+E HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

A0A1S4E5H7 LOW QUALITY PROTEIN: lysine-specific demethylase JMJ706-like

2.3e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

A0A5A7T8M7 Lysine-specific demethylase JMJ706-like protein

2.3e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

A0A5D3E5V1 Lysine-specific demethylase JMJ706-like protein

2.3e-05

82.86

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        DRS +TTIPISIK KRFSI+EA+SRQQLE HRKEV
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

A0A6J1DYM4 lysine-specific demethylase JMJ706-like isoform X1

1.5e-04

77.14

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Query:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV
        +RSNR TIPIS+KFK+FSI+EA SRQQLE HRK+V
Subjt:  DRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGTACTATCCTCTGCAGTGTATGCATACGTCTGTTGCAGCTGTTATGCACATCATGTGTGCCTTTGCCATGGCAGGATTTTGGCGAGTGGCGCCGCTGAAATA
CAACTGAAATGTCTGAGACTTCACGACGTCCAAAGCCAAACATTATACAGAAGCATGCTTATAATGAATTTGGGAATTATGAAACCCCCAGTGTTTCTCAAGTGT
CGTGTTATACATGCGAACCTTTTCCTTCCCTTCAACCGGGGGAGAACTGACAAAGCAGCCTGCTCAACAGGGTCTCAAAAGATTGAAAAAAACTCCATCCACATG
CAAGATAGATCTAACAGAACAACCATTCCCATCTCTATAAAGTTCAAGAGATTCAGCATTAAGGAAGCAAGGAGTAGACAACAGCTTGAGCACCACAGGAAAGAA
GTGAGCCCCGCGCTTCTGCTTTCCATCAAATGCTTGTCTATGGGTAGCGCTATTCAAGATTATCTTAGCTTCTGA

mRNA sequence

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Protein sequence

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MVLSSAVYAYVCCSCYAHHVCLCHGRILASGAAEIQLKCLRLHDVQSQTLYRSMLIMNLGIMKPPVFLKCRVIHANLFLPFNRGRTDKAACSTGSQKIEKNSIHM
QDRSNRTTIPISIKFKRFSIKEARSRQQLEHHRKEVSPALLLSIKCLSMGSAIQDYLSF

CmaCh02G016310 (gene) of Cucurbita maxima (Rimu) v1.1 genome