; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G017690 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G017690
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionhistone H1
Genome locationCma_Chr02:9869295..9870203
RNA-Seq ExpressionCmaCh02G017690
SyntenyCmaCh02G017690
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606395.1 Histone H1.2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-10794.1Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKK AAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP V      KKAPAKS  AKKVKSPARK+PARRAK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAK

KAG7036335.1 Histone H1.2 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-10994.85Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP V      KKAPAKSV AKKVKSPARK+PARRAKK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_022930932.1 histone H1 [Cucurbita moschata]5.4e-11597.43Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_022995180.1 histone H1 [Cucurbita maxima]7.2e-120100Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

XP_023533642.1 histone H1 [Cucurbita pepo subsp. pepo]3.7e-11698.17Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKP-AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSKEPKEKKP AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKP-AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKK

Query:  LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
        LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
Subjt:  LLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK

Query:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AA+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

TrEMBL top hitse value%identityAlignment
A0A1S3BL93 histone H13.8e-9887.18Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AE AE NP NKAAKSKKSKEPKEKKP AA RK RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
        LLFHLKKLVASGKLVKVKSSFKLK AKSA+VKPASPA KKP AAKPK KA AK KAVAKS AKPKAAAKPKPKT AKPKAA KPK    KSKSS VAKPK
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK

Query:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AA KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKP VKKAPA+KKAP+KSV AKKVKS A+KAP++R  K
Subjt:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A5A7UQL0 Histone H13.8e-9887.18Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AE AE NP NKAAKSKKSKEPKEKKP AA RK RNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
        LLFHLKKLVASGKLVKVKSSFKLK AKSA+VKPASPA KKP AAKPK KA AK KAVAKS AKPKAAAKPKPKT AKPKAA KPK    KSKSS VAKPK
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK

Query:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AA KTKAAPKPKAKEKPAKA+RTSTRTSPG+KAPAPKP VKKAPA+KKAP+KSV AKKVKS A+KAP++R  K
Subjt:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1CWP2 histone H12.5e-10289.38Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT AE AE NP NKAAKSKKSKEPKEKKP AA RK RNPPTHPPYEEMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK
        LLFHLKKLVASGKLVKVKSSFKLK AKSA+VKP SPA KKPAAAKPKPKAAAKTKAVAKS AKPKAAAKPKPKTAAKPKAA KPKP  AKSKSS VAKPK
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPA-KKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPK

Query:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AATKTKAAPKPKAKEKPAK +RTSTRTSPG++APAPKP  KKAPA+KKAPAKSV AKKVKSPA+KAPA+R KK
Subjt:  AATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1ES19 histone H12.6e-11597.43Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPT+AEPAE NPANKAAKSKKSK+PKEKKP AAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAK+PAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A+KTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKP VKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

A0A6J1K3E6 histone H13.5e-120100Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
        MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL
Subjt:  MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
        LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKA

Query:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
Subjt:  ATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

SwissProt top hitse value%identityAlignment
P08283 Histone H13.8e-4757.14Show/hide
Query:  MATEEPVVPVESAAEPTDAEPAEV---------NPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK
        MATEEP+V VE+  EP   EP  +          P  +  K+KK+K  K KK    A K RNP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQK
Subjt:  MATEEPVVPVESAAEPTDAEPAEV---------NPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK

Query:  QLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAV-AKSSAKPKAAAKPKPKTAAKPKA-AAKPKPTAAK
        QLP+NFKKLLL +LKK VASGKL+KVK SFKL +A          AKKPA AKPK K AAK K+V AK +AKPKA A  KPK A+K KA AAKPK  AAK
Subjt:  QLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAV-AKSSAKPKAAAKPKPKTAAKPKA-AAKPKPTAAK

Query:  SKSSVVAKPKAATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARR
         K+        A K KA  KPK+K KPAK ++TS +T+PGKK  A    VKK  A+KK P KSV AK VKSP +K   +R
Subjt:  SKSSVVAKPKAATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARR

P23444 Histone H11.8e-3351.09Show/hide
Query:  TEEPVVPVESAAE-PTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKL
        TE P   V++A E P DA  A    AN AAK+KK+  PK+          R  PTH PY EM+ +AI +LKERTGSS YAI KF+E+K K +LP NF+KL
Subjt:  TEEPVVPVESAAE-PTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKL

Query:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPK-PTAAKSKSSVVAKPK
        L   LKKLVA GKL KVK+S+KL SA     KP +  KKP     KPKAAAK K  AK+ AK K A KPKP  AAKPKA  KPK P   K+K +  AKPK
Subjt:  LLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPK-PTAAKSKSSVVAKPK

Query:  AATKTKAAPKPKAKEK-PAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
         A    A PKP AK+   AKA++TS + +PGKKAPA                K+ P+KK  +P RKAP+R+AKK
Subjt:  AATKTKAAPKPKAKEK-PAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

P26568 Histone H1.18.0e-3754.2Show/hide
Query:  SAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS
        +A  P      E  PA K  K+K  KE KEKK  AAA K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKAA-PKP
        GKLVKVK+SFKL SA +    P + A+K A AK KP     T AV K+  K  AA+K K   A KPK AA  K TA      V     AATK KA   KP
Subjt:  GKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKAA-PKP

Query:  KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK
        KAK +PAKA++T+  TSP KKA A    V      KK P K  V  K VKSPA++A +R  K
Subjt:  KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK

P26569 Histone H1.25.5e-4659.44Show/hide
Query:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E  PA K  KSKK+   K  KKP  AAA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+SA   KPA+P KK A    KPK       A AK KA AK + KP A    K K  AKPKA    K TA
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA

Query:  AKSKSSVVAKPKAATKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AK KS  VA   A +KTKA A KPKAKE+PAKASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  AKSKSSVVAKPKAATKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

P37218 Histone H13.0e-4457.09Show/hide
Query:  MATEEPVVPVESAAEPTDAEPA--EVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFK
        MATEEPV+  E   E    E    E NP  K+ K+K  KE K KKP AA RK    PTHPPY EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LPSNFK
Subjt:  MATEEPVVPVESAAEPTDAEPA--EVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFK

Query:  KLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAK----PKPKAAAKTKAVAKSSAKPKAAAKP--------KPKTAAKPKAAAKPKPT
        KLLL  LKK VAS KLVKVK+S+KL S            KKPAAAK     KPKAA K KA   + AKP A AKP        K K AAK K AAK KP 
Subjt:  KLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAK----PKPKAAAKTKAVAKSSAKPKAAAKP--------KPKTAAKPKAAAKPKPT

Query:  A-AKSKSSVVAKPKAATKTKAAP-------KP--KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        A AK K++  AKPKAA K KAAP       KP  KAK   AK ++T+TRT+P +KA APK T      +KK P K  PAK VKSPA+KA  +R +K
Subjt:  A-AKSKSSVVAKPKAATKTKAAP-------KP--KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein5.7e-3854.2Show/hide
Query:  SAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS
        +A  P      E  PA K  K+K  KE KEKK  AAA K R   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVAS
Subjt:  SAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVAS

Query:  GKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKAA-PKP
        GKLVKVK+SFKL SA +    P + A+K A AK KP     T AV K+  K  AA+K K   A KPK AA  K TA      V     AATK KA   KP
Subjt:  GKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKAA-PKP

Query:  KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK
        KAK +PAKA++T+  TSP KKA A    V      KK P K  V  K VKSPA++A +R  K
Subjt:  KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKS-VPAKKVKSPARKAPARRAK

AT2G18050.1 histone H1-37.2e-0941.04Show/hide
Query:  EPKEKKPAAAARKTRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPA
        E K  K   AA+K R P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      I +  
Subjt:  EPKEKKPAAAARKTRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPA

Query:  SPAKKPAAAKPKPKAAAKTKAVAKSSAKP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKA
            K      K +    TK    SS +P K  +  K +   K K A +P     KS  S V K KA   + A
Subjt:  SPAKKPAAAKPKPKAAAKTKAVAKSSAKP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKA

AT2G18050.2 histone H1-31.1e-0439.73Show/hide
Query:  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSA
        MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+KL      I +      K      K +    TK    SS 
Subjt:  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSA

Query:  KP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKA
        +P K  +  K +   K K A +P     KS  S V K KA   + A
Subjt:  KP-KAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein3.9e-4759.44Show/hide
Query:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E  PA K  KSKK+   K  KKP  AAA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+SA   KPA+P KK A    KPK       A AK KA AK + KP A    K K  AKPKA    K TA
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPK-------AAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTA

Query:  AKSKSSVVAKPKAATKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        AK KS  VA   A +KTKA A KPKAKE+PAKASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  AKSKSSVVAKPKAATKTKA-APKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK

AT2G30620.2 winged-helix DNA-binding transcription factor family protein9.4e-3347.48Show/hide
Query:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS
        M+ EE  VP  V+S A  T  +  E  PA K  KSKK+   K  KKP  AAA  K +   +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP 
Subjt:  MATEEPVVP--VESAAEPTDAEPAEVNPANKAAKSKKSKEPK-EKKP--AAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPS

Query:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSV
         F+KLLL +LK+LVAS KLVKVK+SFK+ SA+SA   KPA+P KK                                                   K++V
Subjt:  NFKKLLLFHLKKLVASGKLVKVKSSFKLKSAKSAIV-KPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSV

Query:  VAKPKAATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK
        VAKP                   KASRTSTRTSPGKK  AP    KK   +KKAPAKSV   KVKSPA++A  R+AKK
Subjt:  VAKPKAATKTKAAPKPKAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCGGCAGAGCCGACCGACGCTGAACCAGCAGAAGTGAATCCAGCTAACAAGGCCGCGAAGTCGAAGAAG
TCCAAAGAACCTAAAGAGAAGAAGCCTGCTGCTGCTGCTAGAAAAACTAGAAATCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCAATTGTCACG
TTGAAAGAGAGAACTGGTTCGAGTCAGTATGCGATCACCAAATTTATTGAGGAGAAGCAGAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTG
AAGAAACTTGTGGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCATTTAAGCTTAAGTCGGCGAAGTCGGCGATTGTGAAACCTGCTTCTCCTGCCAAGAAGCCT
GCAGCTGCGAAGCCTAAACCAAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTTCAGCGAAGCCGAAAGCCGCTGCAAAACCGAAGCCGAAGACGGCTGCC
AAGCCTAAGGCTGCTGCTAAACCTAAGCCTACGGCAGCCAAGTCAAAGAGCAGTGTTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCG
AAAGCCAAGGAGAAGCCTGCCAAGGCTTCAAGGACATCGACGAGAACCTCACCTGGGAAGAAGGCACCAGCTCCGAAACCGACGGTGAAGAAAGCACCGGCGTCC
AAGAAGGCACCAGCAAAAAGTGTTCCGGCAAAGAAAGTGAAATCGCCGGCAAGAAAGGCCCCTGCTAGAAGAGCAAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGAGGAACCGGTCGTGCCGGTGGAGTCTGCGGCAGAGCCGACCGACGCTGAACCAGCAGAAGTGAATCCAGCTAACAAGGCCGCGAAGTCGAAGAAG
TCCAAAGAACCTAAAGAGAAGAAGCCTGCTGCTGCTGCTAGAAAAACTAGAAATCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCAATTGTCACG
TTGAAAGAGAGAACTGGTTCGAGTCAGTATGCGATCACCAAATTTATTGAGGAGAAGCAGAAACAACTTCCTTCGAACTTTAAGAAGCTTTTGTTATTCCATTTG
AAGAAACTTGTGGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCATTTAAGCTTAAGTCGGCGAAGTCGGCGATTGTGAAACCTGCTTCTCCTGCCAAGAAGCCT
GCAGCTGCGAAGCCTAAACCAAAAGCGGCCGCTAAGACTAAGGCTGTGGCTAAATCTTCAGCGAAGCCGAAAGCCGCTGCAAAACCGAAGCCGAAGACGGCTGCC
AAGCCTAAGGCTGCTGCTAAACCTAAGCCTACGGCAGCCAAGTCAAAGAGCAGTGTTGTTGCGAAGCCCAAAGCTGCAACGAAGACTAAAGCCGCTCCCAAGCCG
AAAGCCAAGGAGAAGCCTGCCAAGGCTTCAAGGACATCGACGAGAACCTCACCTGGGAAGAAGGCACCAGCTCCGAAACCGACGGTGAAGAAAGCACCGGCGTCC
AAGAAGGCACCAGCAAAAAGTGTTCCGGCAAAGAAAGTGAAATCGCCGGCAAGAAAGGCCCCTGCTAGAAGAGCAAAGAAGTAA
Protein sequenceShow/hide protein sequence
MATEEPVVPVESAAEPTDAEPAEVNPANKAAKSKKSKEPKEKKPAAAARKTRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHL
KKLVASGKLVKVKSSFKLKSAKSAIVKPASPAKKPAAAKPKPKAAAKTKAVAKSSAKPKAAAKPKPKTAAKPKAAAKPKPTAAKSKSSVVAKPKAATKTKAAPKP
KAKEKPAKASRTSTRTSPGKKAPAPKPTVKKAPASKKAPAKSVPAKKVKSPARKAPARRAKK