CuGenDBv2

Gene ID	CmaCh02G017960
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Nascent polypeptide-associated complex subunit alpha, muscle-specific form
Genome location	Cma_Chr02:10011265..10011867
RNA-Seq Expression	CmaCh02G017960
Synteny	CmaCh02G017960
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571464.1 hypothetical protein SDJN03_28192, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-75

74.63

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYYG +     ARF S PSRDFRG+NCRSFQSG GI PTP K   S TKH YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF 
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  N-NSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL
        N NS LHEEFYD +FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLE+PRSAPEF++H PSAKSAP SPTR+   S  F FH+  SATKTLRRIL+L
Subjt:  N-NSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

KAG6606421.1 hypothetical protein SDJN03_03738, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-96

92.08

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Query:  MEAVAVFE-QHRNQYYGGVNARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL-NN
        MEAV V E QHRNQYYG   A FGSFPSRDFRGVNCRSFQSG GI PTPSK STSET+HFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL NN
Subjt:  MEAVAVFE-QHRNQYYGGVNARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL-NN

Query:  SVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHLDVD
        SVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTS EIPRSAPEFDLHHPSAKSAP SPTRDQNFSP FFFHND SATKTLRRILHLDVD
Subjt:  SVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHLDVD

Query:  NE
        NE
Subjt:  NE

KAG7011227.1 hypothetical protein SDJN02_26130, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-64

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYYG +     ARF S PSRDFRG+NCRSFQSG GI PTP K   S TKH YPSSPKTP TCLSSN+GN K  A+V +APIPI  KF 
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  N-NSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRD
        N NS LHEEFYD +FSFSELWAGPTYSNSPPPSSLPIPKFSVAKRT SLE+PRSAPEF++H PSAKSAP SPTR+
Subjt:  N-NSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRD

KGN47907.1 hypothetical protein Csa_004001 [Cucumis sativus]

8.1e-76

76.1

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDFRG+NCRSFQSG GI PTP K   SET+HFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL
        N S   HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAKSAP SPTRDQNFS  FFFH+  SATKTLRRIL+L
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

XP_016900729.1 PREDICTED: uncharacterized protein LOC107990294 [Cucumis melo]

5.8e-74

75.12

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDF G+NCRSFQSG GI PTP K  TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL
        N S V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAKSAP SPTRDQ+FS  +FFH+  SATKTLRRIL+L
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHP6 Uncharacterized protein

3.9e-76

76.1

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDFRG+NCRSFQSG GI PTP K   SET+HFYP SPKTP  CL+SNS N K  AT+ +APIPIKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL
        N S   HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAKSAP SPTRDQNFS  FFFH+  SATKTLRRIL+L
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL

Query:  DVDNE
        DV NE
Subjt:  DVDNE

A0A1S4DXL6 uncharacterized protein LOC107990294

2.8e-74

75.12

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDF G+NCRSFQSG GI PTP K  TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL
        N S V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAKSAP SPTRDQ+FS  +FFH+  SATKTLRRIL+L
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHL

Query:  DVDNE
        DVDNE
Subjt:  DVDNE

A0A5A7UUU2 Nascent polypeptide-associated complex subunit alpha, muscle-specific form

4.1e-57

71.84

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDF G+NCRSFQSG GI PTP K  TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTR
        N S V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAK   +   R
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTR

A0A5D3CPQ8 Nascent polypeptide-associated complex subunit alpha, muscle-specific form

4.1e-57

71.84

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL
        MEAV V EQHRNQYY  V     ARFGS  SRDF G+NCRSFQSG GI PTP K  TSET+HFYP SPKTP   L+SNS N K  AT  +API IKPK  
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFL

Query:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTR
        N S V HEEFYD SFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLE+ RSAPEF++HHPSAK   +   R
Subjt:  NNS-VLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTR

A0A6J5YBT8 Uncharacterized protein

1.5e-43

51.85

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Query:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKD---------STSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTA
        ME + V  + +NQYY  V     AR+G  PS+DFR +NCR+FQSG GI PTPSK+          +S +K   PS  KTP   + S S +   G + P A
Subjt:  MEAVAVFEQHRNQYYGGVN----ARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKD---------STSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTA

Query:  PIPIKPKFLNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLEIPRSAPEFDLH--HPSAKSAPSSPTRDQNFSPIFFFHNDVS
         I +K      S   E+ ++ SFSFSELWAGP YSNSPPPSSLPIPKFS+  KRT SLE+P SA + ++H  HP AKSAP+SPTR+ + S    FHN  S
Subjt:  PIPIKPKFLNNSVLHEEFYDPSFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLEIPRSAPEFDLH--HPSAKSAPSSPTRDQNFSPIFFFHNDVS

Query:  ATKTLRRILHLDVDNE
        AT+TLRRIL+LDVD+E
Subjt:  ATKTLRRILHLDVDNE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02715.1 unknown protein

1.9e-30

46.45

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Query:  MEAVAVFEQHRNQYYGGVNA---RFGSFPSRDFRGVNCRSFQSGVGIFPTPSK-DSTSETKHFY-----PSSPKTPLTCLSSNSGNAKSGATVPTAPIPI
        ME + V  +HR+QYYG  +    RF S PS+ FR +NCR+FQSGVG+ P P +  ST  TK        P SPK+ L      S    SG    T+PIPI
Subjt:  MEAVAVFEQHRNQYYGGVNA---RFGSFPSRDFRGVNCRSFQSGVGIFPTPSK-DSTSETKHFY-----PSSPKTPLTCLSSNSGNAKSGATVPTAPIPI

Query:  -KPKFLNNSVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATK
           +         EF D   S S+SELWAGPTYSNSPPP+S+PIPKFS+  KRT SL  P      D+    AKSAP SPT   + +P   F + VSAT 
Subjt:  -KPKFLNNSVLHEEFYDP--SFSFSELWAGPTYSNSPPPSSLPIPKFSV-AKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATK

Query:  TLRRILHLDVD
        TLRR+L+L+++
Subjt:  TLRRILHLDVD

Sequences

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CDS sequence

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ATGGAAGCAGTGGCCGTTTTTGAGCAGCATAGGAACCAATATTATGGTGGGGTCAATGCTCGATTTGGGTCATTCCCGTCCCGAGACTTCAGAGGGGTGAACTGTAGGAG
TTTCCAATCTGGAGTTGGTATATTCCCAACTCCCTCCAAGGATTCTACCTCTGAAACTAAACACTTCTACCCTTCTTCTCCAAAAACACCACTAACTTGTTTAAGTTCCA
ACTCCGGAAATGCTAAATCTGGAGCTACTGTGCCAACTGCTCCAATTCCTATCAAACCCAAATTTTTAAACAACAGTGTTCTCCATGAAGAATTCTATGATCCAAGTTTC
TCGTTCTCTGAGCTTTGGGCTGGACCCACTTATTCGAATTCTCCGCCTCCAAGTTCGTTACCCATTCCCAAATTTTCAGTTGCTAAGAGAACCACGTCTCTGGAGATCCC
TCGTTCTGCCCCTGAATTTGATTTGCATCACCCATCTGCCAAGTCAGCACCATCATCCCCAACTCGAGACCAAAACTTTTCCCCCATATTTTTCTTTCATAATGATGTCT
CTGCGACTAAGACTCTACGTCGCATTCTTCATCTTGATGTTGACAATGAATGA

mRNA sequence

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Protein sequence

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MEAVAVFEQHRNQYYGGVNARFGSFPSRDFRGVNCRSFQSGVGIFPTPSKDSTSETKHFYPSSPKTPLTCLSSNSGNAKSGATVPTAPIPIKPKFLNNSVLHEEFYDPSF
SFSELWAGPTYSNSPPPSSLPIPKFSVAKRTTSLEIPRSAPEFDLHHPSAKSAPSSPTRDQNFSPIFFFHNDVSATKTLRRILHLDVDNE

CmaCh02G017960 (gene) of Cucurbita maxima (Rimu) v1.1 genome