; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh02G017980 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh02G017980
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibosome-recycling factor, chloroplastic
Genome locationCma_Chr02:10022215..10025699
RNA-Seq ExpressionCmaCh02G017980
SyntenyCmaCh02G017980
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0032544 - plastid translation (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domainsIPR002661 - Ribosome recycling factor
IPR023584 - Ribosome recycling factor domain
IPR036191 - RRF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036363.1 Ribosome-recycling factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.5e-14196.79Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VFQPKQIPPPKALLSIRDYNAGLNC+KCGSTT  LSSWKSASNY RIRRHALMLP QPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_022931087.1 ribosome-recycling factor, chloroplastic isoform X4 [Cucurbita moschata]2.6e-14196.79Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VF+PKQIPPPKALLSIRDYNAGLNC+KCGSTT  LSSWKSASNY RIRRHALMLPTQPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_022995869.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucurbita maxima]1.9e-147100Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_022995870.1 ribosome-recycling factor, chloroplastic isoform X2 [Cucurbita maxima]8.2e-14398.57Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLRPVFQPKQIPPPKALLSIR    GLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

XP_023533411.1 ribosome-recycling factor, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]4.8e-14397.86Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VFQPKQIPPPKALLSIRDYNAGLNCVKCGSTT HLSSWKSASNY RIRRHALMLPTQPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

TrEMBL top hitse value%identityAlignment
A0A6J1ESI6 Ribosome-recycling factor, chloroplastic1.3e-14196.79Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VF+PKQIPPPKALLSIRDYNAGLNC+KCGSTT  LSSWKSASNY RIRRHALMLPTQPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A0A6J1ESQ7 Ribosome-recycling factor, chloroplastic2.7e-13996.39Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VF+PKQIPPPKALLSIRDYNAGLNC+KCGSTT  LSSWKSASNY RIRRHALMLPTQPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK L
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL

A0A6J1ETB9 Ribosome-recycling factor, chloroplastic2.7e-13996.39Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLR VF+PKQIPPPKALLSIRDYNAGLNC+KCGSTT  LSSWKSASNY RIRRHALMLPTQPF SGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLK IEKAIVNSNLGMTPNNDG+VIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEK L
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL

A0A6J1K544 Ribosome-recycling factor, chloroplastic4.0e-14398.57Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLRPVFQPKQIPPPKALLSIR    GLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A0A6J1K744 Ribosome-recycling factor, chloroplastic9.1e-148100Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
        MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALI

Query:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
        EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL
Subjt:  EKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQL

Query:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
Subjt:  TSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

SwissProt top hitse value%identityAlignment
A2YMU2 Ribosome-recycling factor, chloroplastic4.9e-8264.48Show/hide
Query:  PPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNS
        PP+AL S         CV      +      S++N+  +R   +   ++P    N  K  R V+R ATIEEIEAEK++IE   R RMEK I+TV+++FN+
Subjt:  PPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNS

Query:  IRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKV
        +RTGRANPAMLD+IEVEYYG+PV LKSIAQI+TPDA+SLLIQPYDKSSLKLIEK IV +NLG+TP+NDG+VIR+T+P LTS+RRKEL+K VAK AEEGKV
Subjt:  IRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKV

Query:  AVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        A+RNIRRDA+KAYDKLEKEKKLSEDNVKDLS+DLQK+TD+YMKKI+ I KQKE+EL+K+
Subjt:  AVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

A3BLC3 Ribosome-recycling factor, chloroplastic4.9e-8264.48Show/hide
Query:  PPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNS
        PP+AL S         CV      +      S++N+  +R   +   ++P    N  K  R V+R ATIEEIEAEK++IE   R RMEK I+TV+++FN+
Subjt:  PPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNS

Query:  IRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKV
        +RTGRANPAMLD+IEVEYYG+PV LKSIAQI+TPDA+SLLIQPYDKSSLKLIEK IV +NLG+TP+NDG+VIR+T+P LTS+RRKEL+K VAK AEEGKV
Subjt:  IRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKV

Query:  AVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        A+RNIRRDA+KAYDKLEKEKKLSEDNVKDLS+DLQK+TD+YMKKI+ I KQKE+EL+K+
Subjt:  AVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

P37706 Ribosome-recycling factor, chloroplastic (Fragment)2.6e-8371.12Show/hide
Query:  WKSASNYFRIRRHALMLPTQPFPSGN--LSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKS
        W +A+NY +I+     + T  F      LS+ R G ++ AT+EEIEAEK+LIEK V+ RMEKTI+ V++SFNSIRT R+NP MLDKI+VEYYG+P  LKS
Subjt:  WKSASNYFRIRRHALMLPTQPFPSGN--LSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKS

Query:  IAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNV
        IAQISTPD+SSLL+ PYDKSSLK IEKAIVNS+LG+TPNNDGDVIRL++PQLT++RRKELSK+VAKQAEEGKVA+RNIRRDA+K+YDKLEKEKKLSEDNV
Subjt:  IAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNV

Query:  KDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        KDLSSDLQK+ D+Y+KK+D I+KQKEKEL+ V
Subjt:  KDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

P82231 Ribosome-recycling factor, chloroplastic1.5e-8367.07Show/hide
Query:  GLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDK
        G++ ++C     ++S W+S++NY R+         +      L   R G  R AT+EE+EAEK+LIE + + RMEKTI+T+RS+FNS+RT RA+P MLD+
Subjt:  GLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDK

Query:  IEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY
        IEVEYYG+PV LKSIAQISTPDASSLLI PYDKSSLK IEKAIV S LG++PNNDG+VIRL+LP LTS+RRKEL+KVV+K AEEGKVAVRNIRRDALK+Y
Subjt:  IEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAY

Query:  DKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        +KLEKEKKLSEDNVKDLS+DLQKLTD+YMKK++ IYKQKE+EL+KV
Subjt:  DKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

Q9M1X0 Ribosome-recycling factor, chloroplastic7.3e-8666.9Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSG----NLSKYRRGVIRAATIEEIEAE
        MA  FSST    PV +  +    K LLS+ D     +C++  S+ +  S+   A ++   +   L L      SG      S  +R VIR+ATIEEIEAE
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSG----NLSKYRRGVIRAATIEEIEAE

Query:  KALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLT
        K+ IE DV+++MEKTI+T+R+SFNSIRTGR+N AMLDKIEVEYYGSPV LKSIAQISTPD SSLL+QPYDKSSLK IEKAIVNS+LG+TPNNDGDVIRL+
Subjt:  KALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLT

Query:  LPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+YDKLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ +YKQKEKEL+KV
Subjt:  LPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV

Arabidopsis top hitse value%identityAlignment
AT3G01800.1 Ribosome recycling factor2.0e-2238.15Show/hide
Query:  ARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERR
        ++ME  ID +      +RTGRA P MLD I VE  G  + L  +A +S  D  +L + PYD  ++K +EKAIV S LG+ P  DG  +  ++P LT E  
Subjt:  ARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERR

Query:  KELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKE-KKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL
        + + K+V K +E   V  ++IRR   KA D ++K    L +D VK L  ++ +LT  ++K  + + K KEKE+
Subjt:  KELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKE-KKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKEL

AT3G63190.1 ribosome recycling factor, chloroplast precursor5.2e-8766.9Show/hide
Query:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSG----NLSKYRRGVIRAATIEEIEAE
        MA  FSST    PV +  +    K LLS+ D     +C++  S+ +  S+   A ++   +   L L      SG      S  +R VIR+ATIEEIEAE
Subjt:  MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSG----NLSKYRRGVIRAATIEEIEAE

Query:  KALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLT
        K+ IE DV+++MEKTI+T+R+SFNSIRTGR+N AMLDKIEVEYYGSPV LKSIAQISTPD SSLL+QPYDKSSLK IEKAIVNS+LG+TPNNDGDVIRL+
Subjt:  KALIEKDVRARMEKTIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLT

Query:  LPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV
        LP LTS+RRKELSKVVAKQ+EEGKVA+RNIRRDALK+YDKLEKEKKLSEDNVKDLSSDLQKL D YMKKI+ +YKQKEKEL+KV
Subjt:  LPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCCTTTCTCCTCCACCACTTCTCTCCGTCCTGTCTTCCAACCCAAACAAATCCCCCCTCCCAAAGCCCTCCTCTCCATCCGAGATTATAATGCAGGCTTAAA
CTGCGTCAAATGCGGCTCCACTACCATGCATCTTTCTTCATGGAAATCAGCTTCAAACTATTTCCGGATCAGGCGACATGCCCTAATGCTTCCTACCCAGCCCTTTCCAT
CAGGGAATCTGTCGAAATACAGAAGAGGAGTCATTAGGGCGGCAACTATCGAAGAAATTGAAGCGGAGAAAGCATTGATTGAGAAAGATGTAAGAGCAAGGATGGAAAAG
ACTATCGATACTGTTCGGTCTAGTTTCAACTCAATAAGGACAGGGAGAGCAAACCCTGCCATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTGGCCTGAA
GAGCATTGCCCAAATTAGTACACCTGATGCAAGCTCTCTCTTGATCCAGCCATATGATAAATCCAGCTTAAAGTTAATAGAGAAGGCCATAGTAAACTCTAACTTGGGAA
TGACTCCAAACAATGATGGAGATGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGGAGAAAGGAATTGTCAAAGGTTGTTGCTAAGCAGGCAGAGGAAGGGAAG
GTGGCGGTGAGGAATATAAGAAGAGATGCCTTGAAAGCCTATGACAAACTCGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGCGATTTGCAGAA
ACTGACAGATGACTATATGAAGAAGATTGATGTCATATACAAGCAGAAAGAGAAGGAGTTGTTGAAGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGCCTTTCTCCTCCACCACTTCTCTCCGTCCTGTCTTCCAACCCAAACAAATCCCCCCTCCCAAAGCCCTCCTCTCCATCCGAGATTATAATGCAGGCTTAAA
CTGCGTCAAATGCGGCTCCACTACCATGCATCTTTCTTCATGGAAATCAGCTTCAAACTATTTCCGGATCAGGCGACATGCCCTAATGCTTCCTACCCAGCCCTTTCCAT
CAGGGAATCTGTCGAAATACAGAAGAGGAGTCATTAGGGCGGCAACTATCGAAGAAATTGAAGCGGAGAAAGCATTGATTGAGAAAGATGTAAGAGCAAGGATGGAAAAG
ACTATCGATACTGTTCGGTCTAGTTTCAACTCAATAAGGACAGGGAGAGCAAACCCTGCCATGCTCGATAAGATTGAGGTGGAGTATTACGGCAGTCCAGTTGGCCTGAA
GAGCATTGCCCAAATTAGTACACCTGATGCAAGCTCTCTCTTGATCCAGCCATATGATAAATCCAGCTTAAAGTTAATAGAGAAGGCCATAGTAAACTCTAACTTGGGAA
TGACTCCAAACAATGATGGAGATGTCATACGGTTGACTCTCCCTCAACTCACATCCGAAAGGAGAAAGGAATTGTCAAAGGTTGTTGCTAAGCAGGCAGAGGAAGGGAAG
GTGGCGGTGAGGAATATAAGAAGAGATGCCTTGAAAGCCTATGACAAACTCGAAAAGGAGAAAAAACTTTCGGAAGATAATGTTAAGGACTTGTCAAGCGATTTGCAGAA
ACTGACAGATGACTATATGAAGAAGATTGATGTCATATACAAGCAGAAAGAGAAGGAGTTGTTGAAGGTGTGAGCAGAAGAAGCAAATGGTGGAGGTTCCCCCGTTGATC
TGTGTCAGATATGAAATTATTCAACGCCTCGTGGGAAGAAAGGGGAATAATAGCTATCAAAAGCAGCAGCATGCATGATGCCTCTGTTGTCAAATTGGCTCATCTCTAAC
TTCTCACTCTGTACATTGAAACTGACATTATGACTACAACACACTCATTTTGACTCGGCGTTCAACTGTTGAGCTTGAGTTTAATGTGCCTATTGACCATAATAATTTCT
CCTCTCCTTCCATTGTTACACTTCAAATCATTCTCTAAATATTGCAGTTTTTTAAAATGTAATGAATGTAGTGCTCAAATTAATTTAGGTGCCCTCTCTCCGCTTCTGTT
GCAGTCGGTAATGTGCAG
Protein sequenceShow/hide protein sequence
MATPFSSTTSLRPVFQPKQIPPPKALLSIRDYNAGLNCVKCGSTTMHLSSWKSASNYFRIRRHALMLPTQPFPSGNLSKYRRGVIRAATIEEIEAEKALIEKDVRARMEK
TIDTVRSSFNSIRTGRANPAMLDKIEVEYYGSPVGLKSIAQISTPDASSLLIQPYDKSSLKLIEKAIVNSNLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQAEEGK
VAVRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVIYKQKEKELLKV