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CmaCh04G002680 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G002680
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLow temperature and salt responsive protein family
Genome locationCma_Chr04:1322623..1323893
RNA-Seq ExpressionCmaCh04G002680
SyntenyCmaCh04G002680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE6037970.1 unnamed protein product [Arabidopsis arenosa]3.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

NP_565897.1 Low temperature and salt responsive protein family [Arabidopsis thaliana]3.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

XP_004143609.2 uncharacterized protein LOC101203086 [Cucumis sativus]3.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        ++IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

XP_022941664.1 low temperature-induced protein lt101.2 [Cucurbita moschata]3.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        ++IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

XP_023639589.1 uncharacterized protein LOC111830941 [Capsella rubella]3.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

TrEMBL top hitse value%identityAlignment
A0A0A0KRZ2 Uncharacterized protein1.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        ++IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

A0A178W1U1 (thale cress) hypothetical protein1.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

A0A6J1FUC5 low temperature-induced protein lt101.21.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        ++IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

A0A6J1KKG3 low temperature-induced protein lt101.21.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        ++IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

Q941D7 At2g38901/At2g389011.8e-1495.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B3.3e-1372.92Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE
        + I++AI+LPPLGVFL++GCG EFWICLLLT LGYIPGIIYAIY + +
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE

P68178 Salt stress-induced hydrophobic peptide ESI31.0e-1483.33Show/hide
Query:  ILKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        +L++ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Subjt:  ILKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

P68179 Low temperature-induced protein lt101.11.0e-1483.33Show/hide
Query:  ILKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        +L++ILAI+LPP+GVFLRY  GVEFWICLLLTILGYIPGIIYA+YVLV
Subjt:  ILKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

Q9ARD5 Low temperature-induced protein lt101.23.0e-1480.85Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        +++ILAI+LPP+GVFLRYG  VEFWICLLLT+LGYIPGIIYA+YVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

Q9ZNQ7 Hydrophobic protein RCI2A2.1e-1586.96Show/hide
Query:  IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE
        II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL +
Subjt:  IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.3e-1264.58Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE
        L+++ AI +PP+GVFLRYG G+EFW+CLLLT+  +IPG+IYAIYVL +
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE

AT2G38905.1 Low temperature and salt responsive protein family3.5e-1895.74Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
        L+IILAILLPP+GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV

AT3G05880.1 Low temperature and salt responsive protein family1.5e-1686.96Show/hide
Query:  IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE
        II+AILLPPLGVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL +
Subjt:  IILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE

AT3G05890.1 Low temperature and salt responsive protein family5.3e-1466.67Show/hide
Query:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE
        ++IILAI+LPPLGVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++ +
Subjt:  LKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVE

AT4G30660.1 Low temperature and salt responsive protein family7.1e-1173.47Show/hide
Query:  ILKIILAILLPPLGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV
        + +II+AILLPPLGV  R G C VEF ICL+LTILGY+PGIIYAIYV+V
Subjt:  ILKIILAILLPPLGVFLRYG-CGVEFWICLLLTILGYIPGIIYAIYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCCTCAAAATCATATTAGCAATTCTTCTTCCACCACTTGGAGTTTTCCTTCGCTATGGCTGTGGGGTAGAGTTTTGGATTTGTTTGTTGCTGACCATA
TTGGGATATATCCCTGGAATTATATATGCAATATATGTGCTGGTTGAAAGTTTGTGTGTTTATGGCTCTTGGATCTATGTTGTTGTAGAACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGAGGTTTCGAATCTGTAGCCATACCCACAAGGTGTTCGATGAAAATCCTCAAAATCATATTAGCAATTCTTCTTCCACCACTTGGAGTTTTCCTTCG
CTATGGCTGTGGGGTAGAGTTTTGGATTTGTTTGTTGCTGACCATATTGGGATATATCCCTGGAATTATATATGCAATATATGTGCTGGTTGAAAGTTTGTGTGT
TTATGGCTCTTGGATCTATGTTGTTGTAGAACACTGA
Protein sequenceShow/hide protein sequence
MKILKIILAILLPPLGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVESLCVYGSWIYVVVEH