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CmaCh04G003400 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G003400
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr04:1668360..1670578
RNA-Seq ExpressionCmaCh04G003400
SyntenyCmaCh04G003400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2754.25Show/hide
Query:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRI--------------EGSFLTRLGDEKQRREQDDELLCH-----------------
        HTL+ HIL LESERSINGLFPFECSLPKS   SLPGNRR     +               GS +  L             LC                  
Subjt:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRI--------------EGSFLTRLGDEKQRREQDDELLCH-----------------

Query:  -------IEFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILV
               IEFCSDNREGKNKAV LDEVIAWATEKQFVLSLRLVGFSHLLGILV
Subjt:  -------IEFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILV

KAG7011932.1 hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1184.78Show/hide
Query:  EFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILVE
        E CS NREGKN AVALDEVIAW TEKQ VLSLR VGFSHLLGIL+E
Subjt:  EFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILVE

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2753.59Show/hide
Query:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRI--------------EGSFLTRLGDEKQRREQDDELLCH-----------------
        HTL+ HIL LESERSINGLFPFECSLPKS   SLPGNRR     +               GS +  L             LC                  
Subjt:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRI--------------EGSFLTRLGDEKQRREQDDELLCH-----------------

Query:  -------IEFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILV
               IEFCSDNREGKNKAV LDEVIAWATEKQFVLSLRLVGFSHLLGIL+
Subjt:  -------IEFCSDNREGKNKAVALDEVIAWATEKQFVLSLRLVGFSHLLGILV

XP_022977821.1 uncharacterized protein LOC111478006 isoform X1 [Cucurbita maxima]4.1e-1552.21Show/hide
Query:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW
        +L+ H LTL SE SINGLFP ECSLPK  ARS    R++ E R +   + R         +   K R E+       IE  +DN EGKN+ VALDEVIAW
Subjt:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW

Query:  ATEKQFVLSLRLV
        A EKQFVLSLRLV
Subjt:  ATEKQFVLSLRLV

XP_022977832.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima]1.1e-1550.85Show/hide
Query:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW
        +L+ H LTL SE SINGLFP ECSLPK  ARS    R++ E R +   + R         +   K R E+       IE  +DN EGKN+ VALDEVIAW
Subjt:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW

Query:  ATEKQFVLSLRLVGFSHL
        A EKQFVLSLRL G  H+
Subjt:  ATEKQFVLSLRLVGFSHL

TrEMBL top hitse value%identityAlignment
A0A6J1FJ97 uncharacterized protein LOC1114462322.1e-0950.43Show/hide
Query:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESR-IEGSFLTRLGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAWATEKQFV
        H+L+ HILT   E SINGL P ECS    + +++ G    RESR IE SF  RLGDEKQR       L  IE      E + + +ALDEVI  A  KQ V
Subjt:  HTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESR-IEGSFLTRLGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAWATEKQFV

Query:  LSLRLVGFSHLLGIL
        LSL  VGF HLLG L
Subjt:  LSLRLVGFSHLLGIL

A0A6J1IL14 uncharacterized protein LOC111478006 isoform X12.0e-1552.21Show/hide
Query:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW
        +L+ H LTL SE SINGLFP ECSLPK  ARS    R++ E R +   + R         +   K R E+       IE  +DN EGKN+ VALDEVIAW
Subjt:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW

Query:  ATEKQFVLSLRLV
        A EKQFVLSLRLV
Subjt:  ATEKQFVLSLRLV

A0A6J1ING1 uncharacterized protein LOC111478006 isoform X25.2e-1650.85Show/hide
Query:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW
        +L+ H LTL SE SINGLFP ECSLPK  ARS    R++ E R +   + R         +   K R E+       IE  +DN EGKN+ VALDEVIAW
Subjt:  TLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTR---------LGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEVIAW

Query:  ATEKQFVLSLRLVGFSHL
        A EKQFVLSLRL G  H+
Subjt:  ATEKQFVLSLRLVGFSHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAAAATGCTTCAGATATCATCGATCTCTTCTCGTTTCAATCTTCACACTCTTGTTCCGCACATTCTCACACTAGAATCAGAGCGCTCCATCAACGGCCTC
TTCCCTTTTGAGTGTTCGTTGCCGAAATCATATGCAAGATCATTACCAGGCAATCGGAGGACGAGAGAGAGCAGAATCGAAGGAAGTTTCTTGACTCGTCTCGGT
GATGAAAAACAGAGAAGAGAGCAGGACGACGAACTCTTATGTCACATTGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGCTCTTGATGAAGTG
ATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTAGAAGAAAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAAAATGCTTCAGATATCATCGATCTCTTCTCGTTTCAATCTTCACACTCTTGTTCCGCACATTCTCACACTAGAATCAGAGCGCTCCATCAACGGCCTC
TTCCCTTTTGAGTGTTCGTTGCCGAAATCATATGCAAGATCATTACCAGGCAATCGGAGGACGAGAGAGAGCAGAATCGAAGGAAGTTTCTTGACTCGTCTCGGT
GATGAAAAACAGAGAAGAGAGCAGGACGACGAACTCTTATGTCACATTGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGCTCTTGATGAAGTG
ATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTAGAAGAAAGAATTTGA
Protein sequenceShow/hide protein sequence
MIKMLQISSISSRFNLHTLVPHILTLESERSINGLFPFECSLPKSYARSLPGNRRTRESRIEGSFLTRLGDEKQRREQDDELLCHIEFCSDNREGKNKAVALDEV
IAWATEKQFVLSLRLVGFSHLLGILVEERI