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CmaCh04G003460 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G003460
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr04:1687481..1688206
RNA-Seq ExpressionCmaCh04G003460
SyntenyCmaCh04G003460
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3190Show/hide
Query:  MASKNVSVSWRAVFFIVMLLMASNVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        MAS NVSVSWRAVFFI MLLMASNVSSRKLLDANIPVEDGFNVE+GASSFFY+LEG++EKRFESFIKSHT ND PRGGNY
Subjt:  MASKNVSVSWRAVFFIVMLLMASNVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]3.7e-1654.76Show/hide
Query:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        MASK VS+    VFFI+MLL++S    NVS+RK LD N P++D FN+++ ASS FYK++G++++RFE  +K+ T ND PRGGNY
Subjt:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]7.8e-1452.94Show/hide
Query:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIP-VEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        MAS  VS+    +FFI+ML ++S    N S+RK LD N P ++D F++++GASS FYKLEG+++KRFE  +K+ T ND PRGGNY
Subjt:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIP-VEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

XP_031739611.1 uncharacterized protein LOC116403190 isoform X2 [Cucumis sativus]7.6e-0952.83Show/hide
Query:  RKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        +K LD N P++D FN+++ ASS FYK++G++++RFE  +K+ T ND PRGGNY
Subjt:  RKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein3.8e-1452.94Show/hide
Query:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIP-VEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        MAS  VS+    +FFI+ML ++S    N S+RK LD N P ++D F++++GASS FYKLEG+++KRFE  +K+ T ND PRGGNY
Subjt:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIP-VEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

A0A0A0KW84 Uncharacterized protein1.8e-1654.76Show/hide
Query:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY
        MASK VS+    VFFI+MLL++S    NVS+RK LD N P++D FN+++ ASS FYK++G++++RFE  +K+ T ND PRGGNY
Subjt:  MASKNVSVSWRAVFFIVMLLMAS----NVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGAATGTTTCAGTGAGTTGGAGAGCTGTGTTCTTCATTGTTATGCTTTTAATGGCTTCTAATGTTTCTTCCAGGAAACTTCTTGATGCTAATATC
CCTGTTGAGGATGGCTTCAACGTTGAAGTTGGCGCATCTTCATTCTTCTATAAGTTGGAGGGCCAGGTGGAAAAGAGATTCGAGAGTTTCATAAAATCACATACG
GGCAACGATGATCCTCGAGGTGGAAACTACTAG
mRNA sequenceShow/hide mRNA sequence
TGTTCTTCATTCTTACAGATCAATTAAGCTCTCTCTCTCGTCCTAAAATGGCTTCCAAGAATGTTTCAGTGAGTTGGAGAGCTGTGTTCTTCATTGTTATGCTTT
TAATGGCTTCTAATGTTTCTTCCAGGAAACTTCTTGATGCTAATATCCCTGTTGAGGATGGCTTCAACGTTGAAGTTGGCGCATCTTCATTCTTCTATAAGTTGG
AGGGCCAGGTGGAAAAGAGATTCGAGAGTTTCATAAAATCACATACGGGCAACGATGATCCTCGAGGTGGAAACTACTAGTTAGATGTGAAATAAGTTTTATGTT
CCTTCCATTTTCATTAAGAATCCTTTTGTTGCACCCATTCAAGCCCTACCCTTCGAAACCCGTTTCAACGAACAATTTTAGACATCTAAGAATCGTTCTCGTACT
TCGAAAATATCTAAGAGTTTCTTGAACAATATTGTGATATCCCTCTTTCTAAGACTATCGAATGTTCTTGTAAATTATAGCTAAT
Protein sequenceShow/hide protein sequence
MASKNVSVSWRAVFFIVMLLMASNVSSRKLLDANIPVEDGFNVEVGASSFFYKLEGQVEKRFESFIKSHTGNDDPRGGNY