CuGenDBv2

Gene ID	CmaCh04G003780
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	late embryogenesis abundant protein At5g17165-like isoform X1
Genome location	Cma_Chr04:1888325..1893083
RNA-Seq Expression	CmaCh04G003780
Synteny	CmaCh04G003780
Gene Ontology terms	NA
InterPro domains	IPR039291 - Late embryogenesis abundant protein At5g17165-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600216.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]

3.7e-58

93.65

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQI T DSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEA+Q TAA  +RAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

XP_022941802.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita moschata]

1.1e-59

95.24

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEA+QPTAA  +RAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

XP_022941803.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita moschata]

1.1e-57

94.44

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKF RAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEA+QPTAA  +RAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

XP_022990289.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita maxima]

3.8e-63

100

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAAVEEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

XP_022990298.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita maxima]

3.5e-61

99.21

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKF RAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAAVEEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FNH5 late embryogenesis abundant protein At5g17165-like isoform X1

5.5e-60

95.24

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEA+QPTAA  +RAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1FT47 late embryogenesis abundant protein At5g17165-like isoform X2

5.1e-58

94.44

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKF RAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEA+QPTAA  +RAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1JAZ8 late embryogenesis abundant protein At5g17165-like

1.8e-47

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Query:  MAANSRSAGAIAGLGKRITNQICTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRA
        MAANSRSAGAIAGL KRIT+QI T D    SAISS+A KFRRAAHTS YDKN DEQVRPSIVPDDVIQPQ+A+KYWAPHP TGVFGP    P AAVA   
Subjt:  MAANSRSAGAIAGLGKRITNQICTSD----SAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRA

Query:  ADGGNHAAVEEEKAWFRPTSLEDSEKPHGF
        ADGGN++ VEEEKAWFRPTSLEDSEKPHGF
Subjt:  ADGGNHAAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1JRN3 late embryogenesis abundant protein At5g17165-like isoform X1

1.8e-63

100

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAAVEEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

A0A6J1JSV5 late embryogenesis abundant protein At5g17165-like isoform X2

1.7e-61

99.21

Show/hide

Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKF RAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPHGF
        NHAAVEEEKAWFRPTSLEDSEKPHGF
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPHGF

SwissProt top hits

e value

%identity

Alignment

F4KFM8 Late embryogenesis abundant protein At5g17165

9.1e-20

47.58

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAA S++   I  +G+ I N +    S   +  L   R  HTSAYDKN +E+++PS VPD++I+P  ++KYW+PHP TGVFGP +    A    R   GG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPH
           +V EEKAWFRPTSLED +K H
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPH

Arabidopsis top hits

e value

%identity

Alignment

AT3G03150.1 unknown protein

1.9e-20

47.11

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Query:  SRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGGNH-A
        S+S   I  L K + N    S  A +S+    RR+ H+SAYDKN ++++  S VPD+VI+P  ++KYW+PHP TGVFGP   + +A      A+G +   
Subjt:  SRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGGNH-A

Query:  AVEEEKAWFRPTSLEDSEKPH
        AV EE AWFRPTSLEDS+K H
Subjt:  AVEEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein

6.5e-21

47.58

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Query:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG
        MAA S++   I  +G+ I N +    S   +  L   R  HTSAYDKN +E+++PS VPD++I+P  ++KYW+PHP TGVFGP +    A    R   GG
Subjt:  MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGG

Query:  NHAAVEEEKAWFRPTSLEDSEKPH
           +V EEKAWFRPTSLED +K H
Subjt:  NHAAVEEEKAWFRPTSLEDSEKPH

Sequences

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CDS sequence

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ATGGCCGCCAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGAAAACGAATCACAAACCAGATCTGTACCAGCGATTCTGCGATCTCCTCCTCTGCTCTGAAGTTCAG
GAGGGCAGCTCACACCTCAGCGTATGACAAAAACCCCGACGAGCAAGTCCGACCAAGCATAGTCCCTGATGATGTGATTCAGCCTCAAGCTGCTGAAAAGTACTGGGCTC
CTCATCCACACACCGGCGTTTTTGGGCCAGAGGCCGAACAGCCTACTGCAGCGGTGGCAACCCGTGCTGCAGATGGTGGCAACCACGCTGCTGTGGAGGAGGAAAAGGCT
TGGTTCCGACCAACAAGTCTGGAGGATTCCGAGAAACCCCACGGGTTTTAG

mRNA sequence

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TGATACGACGCCGTACTGGCGAACTATAAAACAAGGATTTGCTGCTCCAGATTAGAATCAAGAATCAAAAGCAATTAATCGCCGTTTTTCTTCTTCATTCTCTCTCTGTT
TAAGCCTGAATTGTATGGCCGCCAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGAAAACGAATCACAAACCAGATCTGTACCAGCGATTCTGCGATCTCCTCCTCT
GCTCTGAAGTTCAGGAGGGCAGCTCACACCTCAGCGTATGACAAAAACCCCGACGAGCAAGTCCGACCAAGCATAGTCCCTGATGATGTGATTCAGCCTCAAGCTGCTGA
AAAGTACTGGGCTCCTCATCCACACACCGGCGTTTTTGGGCCAGAGGCCGAACAGCCTACTGCAGCGGTGGCAACCCGTGCTGCAGATGGTGGCAACCACGCTGCTGTGG
AGGAGGAAAAGGCTTGGTTCCGACCAACAAGTCTGGAGGATTCCGAGAAACCCCACGGGTTTTAGGGCCGGCCATAATAAGGCATTGTTGTTCTTCTGGCCATCCGAAAG
TAGACAACAAAGTAGCCAACTAAAAAGGTACTAAATAAAGGAGATGGTTGTTTGTGTTTTGCTGTACTAAGGGTTTGGAGTCTTGAGTTACTTGAGGTTGAGGCAATCTG
GCTAGGATACTTCGTCTCAGCTTGTTATATGTTATTCTACCAAACTTTATTTTGACTATGATGCTTTAGTGCAGGTTTATAACTATTCCTCAGTTAGAGAAACAACAGAT
ACCTAAGGATTGTTTTGTTACATGTTTTTAAAAATTGTTTATCAAAATTCTTTTACTAAATTGTTTTCTGAATTTAAAAGTCACAGG

Protein sequence

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MAANSRSAGAIAGLGKRITNQICTSDSAISSSALKFRRAAHTSAYDKNPDEQVRPSIVPDDVIQPQAAEKYWAPHPHTGVFGPEAEQPTAAVATRAADGGNHAAVEEEKA
WFRPTSLEDSEKPHGF

CmaCh04G003780 (gene) of Cucurbita maxima (Rimu) v1.1 genome