; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G004300 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G004300
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTubulin alpha chain
Genome locationCma_Chr04:2200956..2205924
RNA-Seq ExpressionCmaCh04G004300
SyntenyCmaCh04G004300
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022942489.1 uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata]4.5e-6892.05Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        ITV+ FFA YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
XP_022942491.1 uncharacterized protein LOC111447509 isoform X3 [Cucurbita moschata]1.2e-6891.5Show/hide
Query:  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL
        F GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL
Subjt:  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL

Query:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        IVITV+ FFA YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
XP_022991980.1 uncharacterized protein LOC111488465 isoform X1 [Cucurbita maxima]1.3e-75100Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
XP_022991996.1 uncharacterized protein LOC111488465 isoform X3 [Cucurbita maxima]6.8e-8086.46Show/hide
Query:  MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL
        MVSVRLPSLSSMNFP                          GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL
Subjt:  MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL

Query:  SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
XP_023532257.1 uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo]6.8e-7295.36Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        +T++ FFA  FFFGSSFVHDG QTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
TrEMBL top hitse value%identityAlignment
A0A6J1FP04 uncharacterized protein LOC111447509 isoform X35.8e-6991.5Show/hide
Query:  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL
        F GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL
Subjt:  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL

Query:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        IVITV+ FFA YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
A0A6J1FRG9 uncharacterized protein LOC111447509 isoform X12.2e-6892.05Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        ITV+ FFA YFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
A0A6J1JBV1 uncharacterized protein LOC1114830481.4e-6286.09Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGITPTSLLEDT +T+F LGGE  GEN DFS  SAVSTEV KSLSNQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        +TV+FFFA YFF G SFVHDGT+TP SPPPYV PYA LEDERISQ+APRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
A0A6J1JSC6 uncharacterized protein LOC111488465 isoform X33.3e-8086.46Show/hide
Query:  MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL
        MVSVRLPSLSSMNFP                          GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL
Subjt:  MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSL

Query:  SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  SNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
A0A6J1JUF8 uncharacterized protein LOC111488465 isoform X16.4e-76100Show/hide
Query:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
        GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV
Subjt:  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV

Query:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Subjt:  ITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50020.1 unknown protein4.7e-4764.05Show/hide
Query:  QGEEPPESLFMKELKKRGITPTSLLEDTKSTEFEL-GGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL
        +GEEPPESLFMKELK+RG+TPTSLL+D +  + E+  G+ TG +   S T+A +    KSL NQRERS+ LNSEGLEGLIPRA++LLT+GGTFFLGFWPL
Subjt:  QGEEPPESLFMKELKKRGITPTSLLEDTKSTEFEL-GGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPL

Query:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
        IV+T+  F A Y +FG+ F+HDG++TP SPPPY+ PYA LEDERIS + PR+N
Subjt:  IVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAG
ACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGC
ACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAG
CGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATC
GTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCA
TATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGA
mRNA sequenceShow/hide mRNA sequence
TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTAT
GGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAG
GAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAA
TGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGATTGCTTGAACAGCTTGC
TAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATC
TTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACC
TCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGAC
GGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCT
TGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTT
TTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTC
ACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAA
TATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCT
GACGACTTTTATGAGGAGC
Protein sequenceShow/hide protein sequence
MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRE
RSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN