; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G004430 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G004430
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionMYB transcription factor
Genome locationCma_Chr04:2265920..2268205
RNA-Seq ExpressionCmaCh04G004430
SyntenyCmaCh04G004430
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0003691 - double-stranded telomeric DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044597 - Single myb histone 1-6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600281.1 Telomere repeat-binding factor 1, partial [Cucurbita argyrosperma subsp. sororia]4.8e-6594Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEE ALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSR+KARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRKEEED-EEEEEEEEEEEKEVERTERDAM
        AKTVSLSLD KQIAGPKLSNVRKEEED EEEEEEEEEEEKEVERTERDA+
Subjt:  AKTVSLSLDIKQIAGPKLSNVRKEEED-EEEEEEEEEEEKEVERTERDAM

KAG7030941.1 Telomere repeat-binding factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-6386.79Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEE ALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSR+KARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVR----------KEEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLD KQIAGPKLSNVR          +EE++EEEEEEEEEEEKEVERTERDA+
Subjt:  AKTVSLSLDIKQIAGPKLSNVR----------KEEEDEEEEEEEEEEEKEVERTERDAM

XP_022941688.1 telomere repeat-binding factor 1-like isoform X1 [Cucurbita moschata]5.6e-6695.36Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEETALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSREKARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLDIKQIAGPK SNVRK  EEEDEEEEEEEEEEEKEVERTERDAM
Subjt:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM

XP_022941690.1 telomere repeat-binding factor 1-like isoform X2 [Cucurbita moschata]5.6e-6695.36Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEETALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSREKARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLDIKQIAGPK SNVRK  EEEDEEEEEEEEEEEKEVERTERDAM
Subjt:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM

XP_023527383.1 telomere repeat-binding factor 1-like [Cucurbita pepo subsp. pepo]3.8e-6290.6Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEETALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSR+KARLALKR HAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLDIKQIAGPK SNVR EEED      EEEEEKEVERTERDAM
Subjt:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDAM

TrEMBL top hitse value%identityAlignment
A0A6J1FST7 MYB transcription factor2.7e-6695.36Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEETALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSREKARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLDIKQIAGPK SNVRK  EEEDEEEEEEEEEEEKEVERTERDAM
Subjt:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM

A0A6J1FUF3 MYB transcription factor2.7e-6695.36Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTNQEETALKAGVVKHGAGKW+TILKDPEFSDVLYLRSNVDLKDKW N SVMANGWGSREKARLALKRSHAPKKDES VAQGIAVQSEDEFPE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM
        AKTVSLSLDIKQIAGPK SNVRK  EEEDEEEEEEEEEEEKEVERTERDAM
Subjt:  AKTVSLSLDIKQIAGPKLSNVRK--EEEDEEEEEEEEEEEKEVERTERDAM

A0A6J1J3G2 MYB transcription factor3.9e-5783.11Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTN+EE ALKAGVVKHGAGKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREKARLALKR HAPKKDE+ +A+ +AVQSEDE PE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA
        AK+VSLS DIK IAGPK SNVRKEEE+EEE++++EEEE E ERTERDA
Subjt:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA

A0A6J1J6M5 MYB transcription factor3.9e-5783.11Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTN+EE ALKAGVVKHGAGKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREKARLALKR HAPKKDE+ +A+ +AVQSEDE PE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA
        AK+VSLS DIK IAGPK SNVRKEEE+EEE++++EEEE E ERTERDA
Subjt:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA

A0A6J1JBV4 MYB transcription factor3.9e-5783.11Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE
        MGAPKQKWTN+EE ALKAGVVKHGAGKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREKARLALKR HAPKKDE+ +A+ +AVQSEDE PE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPE

Query:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA
        AK+VSLS DIK IAGPK SNVRKEEE+EEE++++EEEE E ERTERDA
Subjt:  AKTVSLSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDA

SwissProt top hitse value%identityAlignment
B4FT40 Single myb histone 22.2e-2572Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKR
        MG PKQ+WT +EE ALKAGV KHG GKW+TIL+D +FS +L LRSNVDLKDKW N SV A G+GSREKAR+ALK+
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKR

C0HIA3 Single myb histone 62.9e-2551.22Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVA-QGIAVQSEDEF
        MGAPKQ+WT++EE AL+AG+ +HG GKW+TILKDPEFS  L  RSNVDLKDKW N +V+ +   SR+KA+ ALKR    PK +E T+A   +    +DE 
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVA-QGIAVQSEDEF

Query:  PEAK-TVSLSLDIKQIAGPKLSN
         + K  VSL  + K  +  K S+
Subjt:  PEAK-TVSLSLDIKQIAGPKLSN

Q6WS85 Single myb histone 17.7e-2673.33Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKR
        MGAPKQ+WT +EE ALKAGV KHG GKW+TIL+D +FS +L LRSNVDLKDKW N SV A G+GSREKAR+ALK+
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKR

Q8VWK4 Telomere repeat-binding factor 18.2e-3661.79Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP
        MGAPKQKWT +EE+ALK+GV+KHG GKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREK+RLA+KR+ + PK++E+++A   ++QS++E  
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP

Query:  EAKTVSLSLDIKQIAGPKLSNVR
        +A +    L +     P+  NVR
Subjt:  EAKTVSLSLDIKQIAGPKLSNVR

Q9FJW5 Telomere repeat-binding factor 22.2e-2562.63Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE
        MGAPKQKWT +EE ALKAGV+KHG GKW+TIL D EFS +L  RSNVDLKDKW N SV A  WGSR+KA+LALKR+    K  D +T    +A+ ++DE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE

Arabidopsis top hitse value%identityAlignment
AT1G49950.1 telomere repeat binding factor 15.9e-3761.79Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP
        MGAPKQKWT +EE+ALK+GV+KHG GKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREK+RLA+KR+ + PK++E+++A   ++QS++E  
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP

Query:  EAKTVSLSLDIKQIAGPKLSNVR
        +A +    L +     P+  NVR
Subjt:  EAKTVSLSLDIKQIAGPKLSNVR

AT1G49950.2 telomere repeat binding factor 15.9e-3761.79Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP
        MGAPKQKWT +EE+ALK+GV+KHG GKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREK+RLA+KR+ + PK++E+++A   ++QS++E  
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP

Query:  EAKTVSLSLDIKQIAGPKLSNVR
        +A +    L +     P+  NVR
Subjt:  EAKTVSLSLDIKQIAGPKLSNVR

AT1G49950.3 telomere repeat binding factor 15.9e-3761.79Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP
        MGAPKQKWT +EE+ALK+GV+KHG GKW+TILKDPEFS VLYLRSNVDLKDKW N SVMANGWGSREK+RLA+KR+ + PK++E+++A   ++QS++E  
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHA-PKKDESTVAQGIAVQSEDEFP

Query:  EAKTVSLSLDIKQIAGPKLSNVR
        +A +    L +     P+  NVR
Subjt:  EAKTVSLSLDIKQIAGPKLSNVR

AT5G67580.1 Homeodomain-like/winged-helix DNA-binding family protein1.6e-2662.63Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE
        MGAPKQKWT +EE ALKAGV+KHG GKW+TIL D EFS +L  RSNVDLKDKW N SV A  WGSR+KA+LALKR+    K  D +T    +A+ ++DE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE

AT5G67580.2 Homeodomain-like/winged-helix DNA-binding family protein1.6e-2662.63Show/hide
Query:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE
        MGAPKQKWT +EE ALKAGV+KHG GKW+TIL D EFS +L  RSNVDLKDKW N SV A  WGSR+KA+LALKR+    K  D +T    +A+ ++DE
Subjt:  MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKK--DESTVAQGIAVQSEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTCCGAAACAGAAATGGACTAACCAAGAAGAAACAGCCCTGAAGGCTGGAGTTGTTAAACATGGAGCTGGAAAGTGGCAAACAATACTTAAGGATCCT
GAATTCAGTGATGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATAAGTGGATAAACACGAGCGTCATGGCTAATGGCTGGGGATCCCGAGAGAAGGCGAGG
TTGGCACTTAAGAGATCGCATGCTCCTAAAAAAGATGAGAGTACTGTGGCTCAAGGTATTGCTGTCCAAAGCGAAGATGAATTTCCGGAAGCTAAGACTGTTTCC
CTTTCCTTGGACATCAAGCAGATAGCTGGTCCAAAGCTATCAAATGTAAGAAAAGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAA
GTAGAAAGAACAGAAAGAGATGCAATGTAG
mRNA sequenceShow/hide mRNA sequence
CTTTGGAGAATAGGGTTTTGGCCTTGCTTCTGATCGAATTTGATTTGATTGTTGAAGACGAAAGGAAAAACGTTGAAAATCGATAAATTGTTTGAAAGTTGAAAC
ACAGGATTTCGGTTCCGGCCGGATTGGATTATCCGGACTTTGATTGAACGGTCTTTGTTTTTGCGATTCGCGACCAATTAGGAGATTTGACGATTCAATGGCGTG
GTCCTTCCGTTTGAGCCGATGTTTCTTCTTTTTATATGTGGTATTGATCCTATGAATTCTAGGACATACTCTACTTCCGGCTGATTGGCTTAAACACTGGTAGAC
TTCTTATCACGTTAGTAGTTCTCTCATTTTTTTTTTGTCTTTTTAGTGCAACAACTTGCGGAGCTGGAGATATGAACCTTTGTCCGTCTGGGTGGAGGTTGCAAT
GTCTCAGTCAGTTTAGTTGGCCCTTGGTGTGAGCCTTCTTTCTGCTGCTTTTGATGGGTGCTCCGAAACAGAAATGGACTAACCAAGAAGAAACAGCCCTGAAGG
CTGGAGTTGTTAAACATGGAGCTGGAAAGTGGCAAACAATACTTAAGGATCCTGAATTCAGTGATGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATAAGT
GGATAAACACGAGCGTCATGGCTAATGGCTGGGGATCCCGAGAGAAGGCGAGGTTGGCACTTAAGAGATCGCATGCTCCTAAAAAAGATGAGAGTACTGTGGCTC
AAGGTATTGCTGTCCAAAGCGAAGATGAATTTCCGGAAGCTAAGACTGTTTCCCTTTCCTTGGACATCAAGCAGATAGCTGGTCCAAAGCTATCAAATGTAAGAA
AAGAAGAGGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAAGTAGAAAGAACAGAAAGAGATGCAATGTAG
Protein sequenceShow/hide protein sequence
MGAPKQKWTNQEETALKAGVVKHGAGKWQTILKDPEFSDVLYLRSNVDLKDKWINTSVMANGWGSREKARLALKRSHAPKKDESTVAQGIAVQSEDEFPEAKTVS
LSLDIKQIAGPKLSNVRKEEEDEEEEEEEEEEEKEVERTERDAM