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CmaCh04G004540 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G004540
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S29
Genome locationCma_Chr04:2326178..2328189
RNA-Seq ExpressionCmaCh04G004540
SyntenyCmaCh04G004540
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z
IPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB80035.1 40S ribosomal protein S29 [Morus notabilis]5.7e-2160.44Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK+YGPGSR C         +L   +             C       SRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

GAV64779.1 Ribosomal_S14 domain-containing protein [Cephalotus follicularis]2.6e-2152.25Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKA--SHFFGL
        MGHSNVWNSHPK+YGPGSRTC                                     RVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIK    +F  +
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKA--SHFFGL

Query:  YCSVFVVTLLY
        Y S+F + LL+
Subjt:  YCSVFVVTLLY

KAE8008097.1 hypothetical protein FH972_004642 [Carpinus fangiana]1.4e-2257.55Show/hide
Query:  MGHSNVWNSHPKSYGPGSRT---------------CLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAK
        MGHSNVWNSHPK+YGPGSRT               C  +   S     F   +E++  L F   C V ++  SRVCGNPHGLIRKYGLMCCRQCFRSNAK
Subjt:  MGHSNVWNSHPKSYGPGSRT---------------CLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAK

Query:  EIGFIK
        EIGFIK
Subjt:  EIGFIK

KAG7014949.1 40S ribosomal protein S29, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2160.22Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS
        MGHSNVWNSHPKSYGPGSRTC                                     RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS

KAG7022492.1 40S ribosomal protein S29 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2161.54Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPKSYGPGSRTCL  +                                SRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

TrEMBL top hitse value%identityAlignment
A0A0A0KV31 Uncharacterized protein4.7e-2159.14Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS
        MGHSNVWNSHPK+YGPGSRTC                                     RVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKAS

A0A0E0MMU2 Uncharacterized protein1.2e-2161.54Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK+YGPGSR C   +AL            +  C++         V  SRVCGNPHGLIRKYGLMCCRQCFRSNAK+IGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

A0A1Q3BA54 Ribosomal_S14 domain-containing protein1.2e-2152.25Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKA--SHFFGL
        MGHSNVWNSHPK+YGPGSRTC                                     RVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIK    +F  +
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKA--SHFFGL

Query:  YCSVFVVTLLY
        Y S+F + LL+
Subjt:  YCSVFVVTLLY

A0A5N6QLR5 Uncharacterized protein6.6e-2357.55Show/hide
Query:  MGHSNVWNSHPKSYGPGSRT---------------CLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAK
        MGHSNVWNSHPK+YGPGSRT               C  +   S     F   +E++  L F   C V ++  SRVCGNPHGLIRKYGLMCCRQCFRSNAK
Subjt:  MGHSNVWNSHPKSYGPGSRT---------------CLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAK

Query:  EIGFIK
        EIGFIK
Subjt:  EIGFIK

W9RIN5 40S ribosomal protein S292.8e-2160.44Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK+YGPGSR C         +L   +             C       SRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

SwissProt top hitse value%identityAlignment
Q4PM47 40S ribosomal protein S292.3e-1241.76Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YGPGSR C                                     RVC N HGLIRKYGL  CR+CFR  A +IGF K
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q5I7K3 40S ribosomal protein S293.3e-1952.75Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK+YG GSR C                                     RVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q680P8 40S ribosomal protein S295.0e-2054.95Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR C                                     RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q6F473 40S ribosomal protein S295.0e-1240.66Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH+N+W SHP+ YG GSR+C                                     R C N HGLIRKYGL  CRQCFR  A +IGF K
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q7XYB0 40S ribosomal protein S293.5e-1340.66Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YG GSR+C                                     ++CGN HGLIRKY +  CRQCFR  AK+IGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein3.6e-2154.95Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR C                                     RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

AT3G44010.1 Ribosomal protein S14p/S29e family protein3.6e-2154.95Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR C                                     RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

AT4G33865.1 Ribosomal protein S14p/S29e family protein3.6e-2154.95Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGHSNVWNSHPK YGPGSR C                                     RVCGN HGLIRKYGL CCRQCFRSNAKEIGFIK
Subjt:  MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACTCCAACGTGTGGAACTCTCATCCTAAGAGCTATGGGCCTGGTTCTCGCACCTGTTTATATAACATGGCTTTAAGCTGTCCTCTTCTAGGTTTTGCCAACTT
GGATGAGATTTTGAGATGCTTAAATTTTGTGCTGATGTGTGGGGTTTCTGTTGTTACTGCATCTCGTGTGTGCGGAAATCCTCATGGTTTGATCAGGAAGTATGGACTTA
TGTGTTGCAGACAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAGGCAAGTCATTTCTTTGGTCTATACTGTTCAGTATTTGTAGTGACACTCCTTTATCTT
CTGCATTATTTGAACTTTGAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACTCCAACGTGTGGAACTCTCATCCTAAGAGCTATGGGCCTGGTTCTCGCACCTGTTTATATAACATGGCTTTAAGCTGTCCTCTTCTAGGTTTTGCCAACTT
GGATGAGATTTTGAGATGCTTAAATTTTGTGCTGATGTGTGGGGTTTCTGTTGTTACTGCATCTCGTGTGTGCGGAAATCCTCATGGTTTGATCAGGAAGTATGGACTTA
TGTGTTGCAGACAATGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATTAAGGCAAGTCATTTCTTTGGTCTATACTGTTCAGTATTTGTAGTGACACTCCTTTATCTT
CTGCATTATTTGAACTTTGAACTTTGAACTTCCCGTTTTTGCAGTACCGCTAAGAAGCTTATATCAGAGACGATGGGTTGAATTTTTTTTTTTTTTTTGTAGATTTCCCC
ATGTTTTGCGATGTTCTTGCTCTTATTTACTTGGCCTGAGAAATGGTTGTTATTAGAAGACGATTGTGACACTTTGCTATGAACTACCATATTTAACGTTTCTTAAATGA
GCTTGCCCTTCGATATATTTTGACAAATATTCCTTCTATTGTTTTTCCAGTCTTTAAGCGTATTCATTACGTGATGTCTCTTTTTGGTGCATCTAGAGCAGCGATTAATT
CGTTAATCCATCACGTTTTTAATTGAAAAATTGTACGGTTACAAATTTTATTCATGTGATTTACCAATTTCTTCTATATGTTTTTTCTATTGGTACGAAATTTTTTGCAT
AAAACCTCATTTGGGATGCCTAGGGAAAAAGATCAAGTTGGCTCTTGTGAATAGCTTGATGCACAAATCTCCTTCGACCTTTGAGCAATCTCATCATCTCCACCTTATGG
GAGTCGGGAGCTACGAGATCACTCCAAGGACATCTTCGTATCTAGAGGTCACAAATTGAGTTGGGAGTTACGAGATCGCTCCAAGGACATTTTCAGTATCTAGAGGTCAC
AGAACAATCATAAAACAACCTTGTTCGATAGTTATTAGTGAGATG
Protein sequenceShow/hide protein sequence
MGHSNVWNSHPKSYGPGSRTCLYNMALSCPLLGFANLDEILRCLNFVLMCGVSVVTASRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKASHFFGLYCSVFVVTLLYL
LHYLNFEL