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CmaCh04G004690 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G004690
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionLYR motif-containing protein At3g19508
Genome locationCma_Chr04:2399888..2400584
RNA-Seq ExpressionCmaCh04G004690
SyntenyCmaCh04G004690
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]1.7e-3288.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELF+RAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC

XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]3.2e-3491.46Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS

XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]1.8e-3798.8Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS

XP_022983545.1 LYR motif-containing protein At3g19508 [Cucurbita maxima]4.7e-38100Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS

XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]5.4e-3492.68Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALRIY EVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELF+RAY HS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS

TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein8.4e-3388.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELF+RAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC

A0A1S3C3W4 LYR motif-containing protein At3g195081.5e-3491.46Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS

A0A5A7T6G8 LYR motif-containing protein1.5e-3491.46Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNS

A0A6J1FPX9 LYR motif-containing protein At3g195088.7e-3898.8Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS

A0A6J1J656 LYR motif-containing protein At3g195082.3e-38100Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS

SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868638.7e-1156.9Show/hide
Query:  YAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNK
        Y EVL+LV+RLP  SR YYA+YARENFV Y EV+  D +S+  L  R ++H+ WVL K
Subjt:  YAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNK

Q1G3M2 LYR motif-containing protein At3g195088.7e-2773.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC
        M+K LR+Y  V+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS++ SAA KLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC

Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein6.2e-2873.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC
        M+K LR+Y  V+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS++ SAA KLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEIC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCCCTGCGAATATACGCCGAGGTTCTGAGGCTGGTGAGGCGGTTGCCGAAGGATTCGAGGCCTTACTACGCTAAATACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCAACAGAGCTTACAACCACTCCGTTTGGGTTCTCAACAAGTATTCGGTGAATGGATCTGCGGCGG
ACAAGCTGAAGGAGATTTGTAATAGCTCCTAG
mRNA sequenceShow/hide mRNA sequence
CCTAGAAACTGAAGCGATCGAAATCGAGAACCAGACGGCGGAGAATTTCGATCGGAGAGAAATGGAGAAGGCCCTGCGAATATACGCCGAGGTTCTGAGGCTGGTGAGGC
GGTTGCCGAAGGATTCGAGGCCTTACTACGCTAAATACGCTCGAGAGAATTTCGTCAACTACAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCAAC
AGAGCTTACAACCACTCCGTTTGGGTTCTCAACAAGTATTCGGTGAATGGATCTGCGGCGGACAAGCTGAAGGAGATTTGTAATAGCTCCTAGTTAGTGTGCGATTTCCG
TCATTTGTTTGAAATAATGCCTCAAAGGGATCGGCGTTGGCTTTTGCCCTTGCAACTCCGGCTACTACTGCCGCCGTGGATTCTGGCGAATTCGTTGCCGGTACGCTTTT
GGAGGATTATTGAATTAAAAATATTTTTATGTTATTCACGTTGAAAAATAAGGTTTGCAAATTATGTTTATAGGATAATTGAGACTAAGTTGTCTATTTAATCAGATAAT
TGTTTATATAAATAAATAATATTTTATTTAATTCTTAT
Protein sequenceShow/hide protein sequence
MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFNRAYNHSVWVLNKYSVNGSAADKLKEICNSS