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CmaCh04G005460 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G005460
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTransmembrane protein
Genome locationCma_Chr04:2779628..2780113
RNA-Seq ExpressionCmaCh04G005460
SyntenyCmaCh04G005460
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456033.1 PREDICTED: uncharacterized protein LOC103496084 [Cucumis melo]1.5e-7295.14Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        MASS F LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
XP_022941561.1 uncharacterized protein LOC111446881 [Cucurbita moschata]7.2e-7598.61Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        MASS FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
XP_022983116.1 uncharacterized protein LOC111481757 [Cucurbita maxima]2.6e-85100Show/hide
Query:  MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD
        MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD
Subjt:  MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD

Query:  FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
XP_022984157.1 uncharacterized protein LOC111482570 isoform X2 [Cucurbita maxima]2.8e-7193.71Show/hide
Query:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI
        +S  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
XP_038875201.1 uncharacterized protein LOC120067716 [Benincasa hispida]1.5e-7295.83Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        MASS FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
TrEMBL top hitse value%identityAlignment
A0A1S3C293 uncharacterized protein LOC1034960847.2e-7395.14Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        MASS F LICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
A0A6J1E545 uncharacterized protein LOC111430823 isoform X21.2e-7093.01Show/hide
Query:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI
        +S  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSS  DQLLI+TSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
A0A6J1FMS5 uncharacterized protein LOC1114468813.5e-7598.61Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        MASS FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMV+FVKDRDFQSFFAKGCVLLHLAMA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
A0A6J1J176 uncharacterized protein LOC1114817571.3e-85100Show/hide
Query:  MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD
        MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD
Subjt:  MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRD

Query:  FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
Subjt:  FQSFFAKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
A0A6J1J9R2 uncharacterized protein LOC111482570 isoform X21.4e-7193.71Show/hide
Query:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI
        +S  FLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSP DQLLI+TSDSFSGLLLFTVGFLLFMV+FVKDR+FQSFFAKGCVLLHLAMAI
Subjt:  ASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMAI

Query:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        WRVYFERKLEDLA+DWPRQVVGDVTLALSWVFFL+YSWREKYD
Subjt:  WRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53035.1 unknown protein2.6e-5164.14Show/hide
Query:  SMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAM
        SM  S F +IC+LHS+IALT G LMMFY+ +  +FG G E A KL+GS+P D+LLI+ S SFSGLLLF +G +LFMVSFVKD++F SFFA G V+L++ M
Subjt:  SMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAM

Query:  AIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        A+WRV FE K+EDLA +WP+Q +GD+ LA+SWVFFL+YSWREKYD
Subjt:  AIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
AT3G15358.1 unknown protein1.9e-4962.5Show/hide
Query:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA
        M S  F +IC+LHS+IALT G LMMFY+ +  +FGHG + A KL+GS+P D+ LI+ S SFSGLLLF +G +LFMVSFVKDR+F SFFA G V+L++ MA
Subjt:  MASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFFAKGCVLLHLAMA

Query:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD
        +WRV FE K+EDLA + P+Q +GD+ LA+SWVFFL+Y+WREKYD
Subjt:  IWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGGGGAAGTCTTCTTTCTTCACCAGGGGAAAATCAAATCAAATCAATGGCATCATCTGCGTTTTTGTTGATTTGTATGCTTCATTCTCTGATTGCTTTA
ACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTT
CTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGTCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTT
GCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTCGAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGG
GATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGTATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGGGGAAGTCTTCTTTCTTCACCAGGGGAAAATCAAATCAAATCAATGGCATCATCTGCGTTTTTGTTGATTTGTATGCTTCATTCTCTGATTGCTTTA
ACATGTGGAGCCTTAATGATGTTTTATTCCCACGAGGTCTATGTGTTTGGCCATGGCCCTGAGACTGCAATCAAGCTGCAGGGATCTAGCCCTCGTGATCAGCTT
CTGATAAAAACATCTGATTCCTTCTCTGGTTTGCTTCTCTTTACTGTTGGGTTTCTTTTATTCATGGTGTCTTTTGTCAAAGACAGAGACTTCCAAAGCTTCTTT
GCTAAAGGGTGCGTGTTGCTTCACTTAGCTATGGCCATATGGAGAGTTTACTTCGAGAGGAAGCTCGAAGATCTTGCTAAAGATTGGCCTCGACAGGTCGTTGGG
GATGTCACATTGGCATTGTCATGGGTTTTCTTTCTTATGTATTCATGGAGAGAAAAGTATGATTAA
Protein sequenceShow/hide protein sequence
MKRGSLLSSPGENQIKSMASSAFLLICMLHSLIALTCGALMMFYSHEVYVFGHGPETAIKLQGSSPRDQLLIKTSDSFSGLLLFTVGFLLFMVSFVKDRDFQSFF
AKGCVLLHLAMAIWRVYFERKLEDLAKDWPRQVVGDVTLALSWVFFLMYSWREKYD