; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G005980 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G005980
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNDR1/HIN1-like protein 12
Genome locationCma_Chr04:3021132..3023486
RNA-Seq ExpressionCmaCh04G005980
SyntenyCmaCh04G005980
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600429.1 hypothetical protein SDJN03_05662, partial [Cucurbita argyrosperma subsp. sororia]4.8e-7895.68Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQNDI GRLEV LTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAE+VADPFDVRKNSSVQF YAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

KAG7031080.1 hypothetical protein SDJN02_05119, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-7895.68Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQNDI GRLEV LTILVEA NDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAE+VADPFDVRKNSSVQFHYAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

XP_022942740.1 uncharacterized protein LOC111447688 [Cucurbita moschata]1.5e-7996.3Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQN+I GRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAE+VADPFDVRKN SVQFHYAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

XP_022983092.1 uncharacterized protein LOC111481740 [Cucurbita maxima]8.5e-83100Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

XP_023526921.1 uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo]4.5e-7692.59Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VIGAHL+NFQNDI GRLEVQLTILVEAENDNAKAHASFSDT LF SF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAE+VADPFDVRKNSSVQFHYAVNSI+IPLNPEQMEEVDF LKTDLIQF+LN +TRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KX91 Uncharacterized protein1.2e-6175.93Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLDNFQ DI GRLEVQLTI++EA+NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LG+ IA++VADPF+VRKNSS++F YAV S  IPLNPEQME VD  LK DL +FDL  NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

A0A5D3D1V8 NDR1/HIN1-like protein 121.2e-6175.93Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++ AHLDNFQ DI GRLEVQLTI+VEA+NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        L + IA++VADPF+V+KNSS++FHYAV S  IPLNPEQME VD+ LK DL  F L  NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

A0A6J1C468 uncharacterized protein LOC1110081151.7e-6579.01Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIPTISVIGAHLD FQ D+ GRLEVQLTI+VEAENDNAKAHASFSDTS FLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LG+ IA +VADPF VRKNSS +F YA+ S  IPLNPEQMEE D+ALK+DL +FDL  NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

A0A6J1FWU7 uncharacterized protein LOC1114476887.3e-8096.3Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQN+I GRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAE+VADPFDVRKN SVQFHYAVNSI IPLNPEQMEEVDFALKTDLIQFDLN NTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

A0A6J1IYB1 uncharacterized protein LOC1114817404.1e-83100Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSF

Query:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
        LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
Subjt:  LGLNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13050.1 unknown protein4.7e-0725.52Show/hide
Query:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVA
        +RT P+   A + C ++ I +I++G+ + + YL   PR P   +  A L+    D+   L   L ++V   N + K+   FS     L F    IA    
Subjt:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVA

Query:  DPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL
        +PF V K  S+   + + S ++ +   Q +++   L T  +  +L
Subjt:  DPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL

AT1G13050.2 unknown protein2.0e-0525Show/hide
Query:  AAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVADPFDVRKNS
        A + C ++ I +I++G+ + + YL   PR P   +  A L+    D+   L   L ++V   N + K+   FS     L F    IA    +PF V K  
Subjt:  AAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVADPFDVRKNS

Query:  SVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL
        S+   + + S ++ +   Q +++   L T  +  +L
Subjt:  SVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL

AT3G26350.1 LOCATED IN: chloroplast2.1e-1028.28Show/hide
Query:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVA
        R T+ + W AA  C +  + +I+ G+ + I YLV  PR P + +  A+L+    D+   L   LTIL    N + K+   FS  +  L +    IA    
Subjt:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVA

Query:  DPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL
        +PF V K +S+  +  + S ++ L   Q  E+   ++T  +  +L
Subjt:  DPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDL

AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family6.2e-0725.49Show/hide
Query:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVAD
        RT   IW  A  C + S+ +I   +   I +L I PRIP   +  A+L     D        L++LV   N N K    F    + L F    IA  V  
Subjt:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVAD

Query:  PFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQCY
        PF  +K+ +      + S  + L      E+   L+ + I++++    +V+ +
Subjt:  PFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQCY

AT5G45320.1 FUNCTIONS IN: molecular_function unknown3.0e-3850.62Show/hide
Query:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLG
        P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P ISV  AHLD  + DIVG L+ QLTI++  ENDNAKAHA F +T   LS+ G
Subjt:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLG

Query:  LNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ
          IA + A  F+V K  S+   Y V S  IPLNP  M+ VD+A+K D+I F+L   +R +
Subjt:  LNIAEIVADPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCTGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATTAGTGTCATAGGCGCTCATCTCGATAACTTCCAGAACGACATCGTCGGCCGCCTCGAGGTTCAGT
TAACGATCCTCGTCGAGGCGGAAAATGATAACGCGAAGGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGATTGTAGCC
GATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTGAGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAACAGGAACACGAGAGTTCAATGTTATACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCCGGTTTGC
GTTTGCCGACGGCCGGCATCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCTGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATTAGTGTCATAGGCGCTCATCTCGATAACTTCCAGAACGACATCGTCGGCCGCCTCGAGGTTCAGT
TAACGATCCTCGTCGAGGCGGAAAATGATAACGCGAAGGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGATTGTAGCC
GATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTGAGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAACAGGAACACGAGAGTTCAATGTTATACACCGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACTGCTTCGCTCCGGTTTGC
GTTTGCCGACGGCCGGCATCTCCTAA
Protein sequenceShow/hide protein sequence
MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIGAHLDNFQNDIVGRLEVQLTILVEAENDNAKAHASFSDTSLFLSFLGLNIAEIVA
DPFDVRKNSSVQFHYAVNSIEIPLNPEQMEEVDFALKTDLIQFDLNRNTRVQCYTPAVSNSLGAGRELLRSGLRLPTAGIS