CuGenDBv2

Gene ID	CmaCh04G006000
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	embryo defective 3006
Genome location	Cma_Chr04:3026353..3030988
RNA-Seq Expression	CmaCh04G006000
Synteny	CmaCh04G006000
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000818 - nuclear MIS12/MIND complex (cellular component)
InterPro domains	IPR007128 - Nuclear MIS12/MIND complex subunit PMF1/Nnf1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600431.1 hypothetical protein SDJN03_05664, partial [Cucurbita argyrosperma subsp. sororia]

5.4e-87

93.92

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKH+I +PLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTT EQENLH LFVQVITSLHGNIEDEFESLCIETQVGR+LDNV+QLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDIA+YLS+TKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIR RASA DGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

XP_022931290.1 uncharacterized protein LOC111437518 isoform X1 [Cucurbita moschata]

2.3e-74

83.15

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        M+KKH+I +P++SS IDLKKSFKLAVRSLLTSCSREEFRECFS FTTAEQE LH LF+QVITSLHGNIEDEFESLC+ETQVG VLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT
        YSKKTNIM+IA+YLS+TKKNEIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEKLR RCRA A DG + T
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT

XP_022941729.1 uncharacterized protein LOC111447007 [Cucurbita moschata]

1.7e-85

92.82

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKH+I +PLNSSLIDLK SFKLAVRSLLTSCSREEFREC SGFTT EQENLH LFVQVITSLHGNIEDEFESLCIETQVGR+LDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDI +YLS+TKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIR RASA DGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

XP_022982967.1 uncharacterized protein LOC111481654 [Cucurbita maxima]

1.1e-92

100

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

XP_023527503.1 uncharacterized protein LOC111790708 [Cucurbita pepo subsp. pepo]

5.4e-87

93.92

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKH+I +PL+SSLIDL KSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLH LFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDIA+YLS+T+KNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRAS  DGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C7G2 uncharacterized protein LOC111008110

2.8e-73

81.11

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKH++ +P +SS +DLKKSFKLAVRSLLTSCSREEFRECF  FT AEQE LH LF+QVITSLHGNIEDEFESLCIETQVG +LDNVEQLLEEQ LDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCD
        YSKKTNIMDIA+YLS+TKKNEIQ LKDMLKT+EEQN+H+QARID+L+KGV+D SG ADAVEKL  RCRA A DG N TCD
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCD

A0A6J1EZ15 uncharacterized protein LOC111437518 isoform X1

1.1e-74

83.15

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        M+KKH+I +P++SS IDLKKSFKLAVRSLLTSCSREEFRECFS FTTAEQE LH LF+QVITSLHGNIEDEFESLC+ETQVG VLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT
        YSKKTNIM+IA+YLS+TKKNEIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEKLR RCRA A DG + T
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT

A0A6J1FPA4 uncharacterized protein LOC111447007

8.4e-86

92.82

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKH+I +PLNSSLIDLK SFKLAVRSLLTSCSREEFREC SGFTT EQENLH LFVQVITSLHGNIEDEFESLCIETQVGR+LDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDI +YLS+TKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIR RASA DGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

A0A6J1IY03 uncharacterized protein LOC111481654

5.4e-93

100

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
        YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

A0A6J1J4K9 uncharacterized protein LOC111483373 isoform X1

2.1e-73

82.02

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        M+KKH+I +P++SS IDLKKSFKLAVRSLLTSCSR EFRECFS FTTAEQE LH LF+QVITSLHGNIEDEFESLC+ET+VG VLDNVEQLLEEQDLDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT
        YSKKTNIM+IA+YLS+TKKNEIQHLKDMLKT+EEQNRH+Q RID+L+KGV+DAS M DAVEKLR RCRA A DG + T
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G19350.1 embryo defective 3006

8.4e-38

52.15

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Query:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL
        MEK         S    LKKSFK  +R LLT+CS+++F + FS F+ AEQE L  L+ +V+ +LH  IE+EF+  C ETQVG +LD VE+L+EEQ LDPL
Subjt:  MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPL

Query:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKL
        +S KT++M IA  L+ +KKNEIQ L  +L+ +EEQNR  +ARI +LKK  +D SG AD +EKL
Subjt:  YSKKTNIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKL

Sequences

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CDS sequence

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ATGGAGAAGAAGCACCAGATTGATTCTCCGCTTAACTCCAGCCTGATTGATCTGAAAAAGTCGTTCAAGCTCGCCGTTCGCTCTCTCCTGACTTCCTGTTCCAGG
GAGGAGTTTCGGGAATGCTTTTCGGGATTTACGACCGCGGAGCAAGAAAATCTTCACAGTCTATTCGTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGAC
GAGTTTGAGTCATTATGTATTGAAACCCAGGTAGGACGTGTACTTGATAATGTTGAACAACTTTTGGAAGAACAAGATCTAGATCCATTGTACTCCAAGAAGACT
AATATAATGGATATTGCTGATTATCTGTCCATCACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTGAAAACGTCTGAGGAACAGAACCGGCATATTCAA
GCCCGTATCGATGTCCTTAAGAAAGGAGTGGAAGATGCCTCGGGCATGGCTGATGCTGTTGAGAAGCTAAGAATCAGATGCAGAGCTTCTGCAGCTGATGGTGAT
AACGGGACCTGCGACACATGA

mRNA sequence

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CTTGACTTCAACCTCTTCGTCTATTCGTCTTTTTTTGTCGTTGAAGCCGTGACTTGCCGGCACTGACCGGAGTCATCAGCAACTCGCTCACTTGCTGCCGTTTTC
TACTTTCTGTTTTATGTTGTTATTGCGCCATTACCGCAGAGTTATATGTTGGCGTAGAATTTAGCGAGGTAGGGTTGGGGATTGAAGTGTATAAACGTTTTGAAA
ATGGAGAAGAAGCACCAGATTGATTCTCCGCTTAACTCCAGCCTGATTGATCTGAAAAAGTCGTTCAAGCTCGCCGTTCGCTCTCTCCTGACTTCCTGTTCCAGG
GAGGAGTTTCGGGAATGCTTTTCGGGATTTACGACCGCGGAGCAAGAAAATCTTCACAGTCTATTCGTTCAGGTTATAACTTCTTTGCATGGAAACATAGAGGAC
GAGTTTGAGTCATTATGTATTGAAACCCAGGTAGGACGTGTACTTGATAATGTTGAACAACTTTTGGAAGAACAAGATCTAGATCCATTGTACTCCAAGAAGACT
AATATAATGGATATTGCTGATTATCTGTCCATCACAAAGAAGAATGAGATCCAACACTTGAAGGACATGCTGAAAACGTCTGAGGAACAGAACCGGCATATTCAA
GCCCGTATCGATGTCCTTAAGAAAGGAGTGGAAGATGCCTCGGGCATGGCTGATGCTGTTGAGAAGCTAAGAATCAGATGCAGAGCTTCTGCAGCTGATGGTGAT
AACGGGACCTGCGACACATGACTCGCTGCTGCCTGTTGCCATTCTATTTGATTTCGTCCCGTTAAATGCATCTGGGATTGGCGTTGAATAATGAGGTCAGTATGT
AATTCAGTAGATTTCTTTATGTGTAAATTTCTTCAGCTTAGCTCAAGCTTAATATGTTTTATGTTGTGGATCATGTGTTCTTCTGTCAATTCAACCGCTCTGTCT
TTCTATAAGAAAAATCTGTATATGGCTTTTGTTTTTCCTCTTCCACTCTCTGAAATCTCTATATGGCTTTTTTCTTTAGCTTAGTCCAATTTTATTTAGGTATAT
ATGATCAGTCAGAATATTTATGAGCAACATTTCACATAAATTTGTTGGTGATGCTAATATTCCAC

Protein sequence

Show/hide protein sequence

MEKKHQIDSPLNSSLIDLKKSFKLAVRSLLTSCSREEFRECFSGFTTAEQENLHSLFVQVITSLHGNIEDEFESLCIETQVGRVLDNVEQLLEEQDLDPLYSKKT
NIMDIADYLSITKKNEIQHLKDMLKTSEEQNRHIQARIDVLKKGVEDASGMADAVEKLRIRCRASAADGDNGTCDT

CmaCh04G006000 (gene) of Cucurbita maxima (Rimu) v1.1 genome