; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G006780 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G006780
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionF-box protein SKIP8-like
Genome locationCma_Chr04:3456198..3459325
RNA-Seq ExpressionCmaCh04G006780
SyntenyCmaCh04G006780
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032710 - NTF2-like domain superfamily
IPR036047 - F-box-like domain superfamily
IPR037401 - SnoaL-like domain
IPR044260 - F-box protein SKIP8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600509.1 F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]2.5e-17296.17Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIA+AAT+ALWSQPFPIAAIVTFLCFLLALF AVRLVSVPFIRRTKALQSEG+GTRNCNCTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFC+IIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG+VEEQM HG
Subjt:  LIVGDVEEQMVHG

KAG7031147.1 F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]8.5e-17396.49Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIA+AAT+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCNCTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFC+IIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIH SGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG+VEEQM HG
Subjt:  LIVGDVEEQMVHG

XP_022942140.1 F-box protein SKIP8-like [Cucurbita moschata]5.9e-17497.12Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCNCTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFC+IIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG+VEEQM HG
Subjt:  LIVGDVEEQMVHG

XP_022981983.1 F-box protein SKIP8-like [Cucurbita maxima]3.0e-178100Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVGDVEEQMVHG
Subjt:  LIVGDVEEQMVHG

XP_038880969.1 F-box protein SKIP8-like [Benincasa hispida]1.5e-16492.01Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEI ++ATIAL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTKALQS  LGTRNCNCTCSLNGGVVIGGLDPRAE+TSST T+MPYLNGR VEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWKAYYAATRTIMNINAQF +IIR+
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQ+AFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG++E+QMVHG
Subjt:  LIVGDVEEQMVHG

TrEMBL top hitse value%identityAlignment
A0A0A0KX34 F-box domain-containing protein3.0e-16390.42Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEI ++ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK LQSE +GTRNCNCTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+YYAATRTIMNINAQF +IIR+
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMS FWLNADYVKCIHASGEFFSGYNAV+QSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG++E+QMVHG
Subjt:  LIVGDVEEQMVHG

A0A5A7TU63 F-box protein SKIP86.6e-16390.42Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEI ++ATIAL SQPFPIAAIVTFLCFLLA+F AVRLVSVP+IRRTK+LQSE +GTRNCNCTCSLNGGVVI GLDPRAE+TSST T+MPYLNGR VEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQDTVTPINGWK+YYAATRTIMNINAQF +IIR+
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMS FWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+H+GRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG++E+QMVHG
Subjt:  LIVGDVEEQMVHG

A0A6J1EUJ3 F-box protein SKIP8-like5.9e-16491.37Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIA+AATIAL SQPFPIAAIVTFLCFLLALFAAVRLVSVP+IRRTK +Q EG+GTRN NCTCSLNGGV IGGL+PRAE+TSST T+MPYLNGR VEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        K P+VVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDD+AWKALYHKDF+LEQDTVTPINGWKAYYAATRTIMNINAQF +IIR+
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTN+YE+HNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG++E+QMVHG
Subjt:  LIVGDVEEQMVHG

A0A6J1FVP4 F-box protein SKIP8-like2.8e-17497.12Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIA+A T+ALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEG+GTRNCNCTCSLNGGVVIGGLDPRAEVTSST TTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFC+IIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWE+GINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVG+VEEQM HG
Subjt:  LIVGDVEEQMVHG

A0A6J1J3L2 F-box protein SKIP8-like1.5e-178100Show/hide
Query:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
        MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE
Subjt:  MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLE

Query:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
        KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE
Subjt:  KTPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRE

Query:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
        RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM
Subjt:  RSLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVM

Query:  LIVGDVEEQMVHG
        LIVGDVEEQMVHG
Subjt:  LIVGDVEEQMVHG

SwissProt top hitse value%identityAlignment
Q93YV9 F-box protein SKIP85.0e-9172.51Show/hide
Query:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER
        T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R
Subjt:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER

Query:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML
        +LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TNV+E+HNGRW+MVHHHSSVML
Subjt:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML

Query:  IVGDVEEQMVH
        I  D ++ +VH
Subjt:  IVGDVEEQMVH

Q9T0B0 Probable F-box protein At4g239601.9e-3457.39Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+NGWKA++A T+ +M +N +F SI+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY

Arabidopsis top hitse value%identityAlignment
AT4G10925.1 Nuclear transport factor 2 (NTF2) family protein3.5e-9272.51Show/hide
Query:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER
        T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R
Subjt:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER

Query:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML
        +LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TNV+E+HNGRW+MVHHHSSVML
Subjt:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML

Query:  IVGDVEEQMVH
        I  D ++ +VH
Subjt:  IVGDVEEQMVH

AT4G10925.2 Nuclear transport factor 2 (NTF2) family protein3.5e-9272.51Show/hide
Query:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER
        T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R
Subjt:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER

Query:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML
        +LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TNV+E+HNGRW+MVHHHSSVML
Subjt:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML

Query:  IVGDVEEQMVH
        I  D ++ +VH
Subjt:  IVGDVEEQMVH

AT4G10925.3 Nuclear transport factor 2 (NTF2) family protein3.5e-9272.51Show/hide
Query:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER
        T   V + + G SMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDF+LEQD +TP+NGWK YYA TR I+++N +F +IIR+R
Subjt:  TPMVVTERQTGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRER

Query:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML
        +LQAM+  WLN+DYVKCIHASGE FSGYN VIQSWQ+ FNWE+G +FQV  VR R+LTDMAWV+MK Y+++D GPF +TNV+E+HNGRW+MVHHHSSVML
Subjt:  SLQAMSHFWLNADYVKCIHASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVML

Query:  IVGDVEEQMVH
        I  D ++ +VH
Subjt:  IVGDVEEQMVH

AT4G23960.1 F-box family protein1.4e-3557.39Show/hide
Query:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNAD
        M+EQL PE+T +AL YLDY SLC+LSMT+S MRK ANDD  W+ALY ++F+ E +  TP+NGWKA++A T+ +M +N +F SI+  RSL  M+  WLN+D
Subjt:  MMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNAD

Query:  YVKCIHASGEFFSGY
        YVKC + SGE F+GY
Subjt:  YVKCIHASGEFFSGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCCGCTGCTGCCACCATTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATT
GGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCCTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTT
TGGACCCCAGGGCTGAGGTAACTTCTTCGACCTGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAG
ACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTACCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCG
CAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAA
CAAGAACAATTATGAACATCAATGCCCAATTCTGTAGCATCATCAGAGAGAGGTCCCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCAT
GCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAAGAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGT
CCTAACAGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGC
ATCATCACAGCTCAGTGATGCTTATTGTTGGGGATGTGGAAGAACAAATGGTTCATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCCGCTGCTGCCACCATTGCCTTGTGGTCCCAACCCTTTCCGATAGCTGCGATTGTTACTTTTCTTTGCTTTCTTCTCGCTCTTTTCGCCGCCGTTCGATT
GGTTTCTGTTCCTTTTATTAGGAGGACGAAAGCGCTTCAATCGGAGGGCCTGGGTACGAGGAATTGTAATTGTACCTGTTCGCTTAACGGTGGTGTGGTTATTGGGGGTT
TGGACCCCAGGGCTGAGGTAACTTCTTCGACCTGTACGACTATGCCTTATTTGAACGGTCGTGTAGTGGAAGTGTTGGAGAAGACGCCGATGGTTGTGACGGAGCGGCAG
ACAGGCGCCTCGATGATGGAACAGTTGGTGCCGGAGATTACTACGCACGCTCTTAGTTACTTGGATTACCCCAGCCTGTGCCGTTTGTCCATGACGAATTCGTTGATGCG
CAAGGCCGCGAATGATGATAATGCCTGGAAAGCGCTTTATCATAAGGACTTCTCACTGGAACAGGATACTGTGACTCCAATTAACGGGTGGAAGGCGTACTATGCTGCAA
CAAGAACAATTATGAACATCAATGCCCAATTCTGTAGCATCATCAGAGAGAGGTCCCTTCAAGCGATGAGTCATTTTTGGTTAAATGCAGATTATGTGAAGTGTATTCAT
GCCTCAGGAGAATTCTTTTCCGGGTATAACGCAGTAATTCAAAGTTGGCAGGTTGCATTTAATTGGGAAGAAGGGATTAATTTTCAGGTCCGCGACGTACGGGCTCGTGT
CCTAACAGACATGGCTTGGGTTAGCATGAAAACCTATGTCGACATGGATACAGGGCCATTCAATGTGACTAACGTCTATGAGTACCATAACGGTCGATGGTACATGGTGC
ATCATCACAGCTCAGTGATGCTTATTGTTGGGGATGTGGAAGAACAAATGGTTCATGGGTAACAGAGCAAAGATAGAAGAGAAGAAAACCATGAAAATATAGAATTACTA
GGTCAAAGATAGGTGATGTCTGGTAGCAGAAGCAAGATTACTTCTTAACAGCACCACCAGAATCAACTGTTCGAACCTCAGTTTTGCTTGAGCTATGTTGATTGCTGCGC
CCTTTTTCTTTCAATGTTCTGGTCCCTAATTCTTTTGTTGGTTCAGAGGTTTCAGGAATGGAATTCAATCCTGGGAATGAGGTATATGATGAGTTTTAGAAGTATTTTTG
GTTGGTTTGGTTCATGCTCAAATGGCTGCTGCATGTGTTTAAACCAATGAAGGATCATCCCCATTATCTGTACTTTAATTTCTTGATCGATTGACTGCTACACTTCGACA
GGTAGATGACTTGTTCAATAACTTATGTGTAAAGAAGAAAGGATAAGCAACTTTGGATGAGACTCTATTGCAAATGTGTAAGATTTTCTATTCAGAAACGCCCAATGTTA
AAGCATGATGGGGGGTAATGCCTGTTGGTTAAATGGGGTTTTGCATCAAATCTACTTTTTTTTTGGTTAAATTAGAAATGCCCCCTATGTTTCGAT
Protein sequenceShow/hide protein sequence
MEIAAAATIALWSQPFPIAAIVTFLCFLLALFAAVRLVSVPFIRRTKALQSEGLGTRNCNCTCSLNGGVVIGGLDPRAEVTSSTCTTMPYLNGRVVEVLEKTPMVVTERQ
TGASMMEQLVPEITTHALSYLDYPSLCRLSMTNSLMRKAANDDNAWKALYHKDFSLEQDTVTPINGWKAYYAATRTIMNINAQFCSIIRERSLQAMSHFWLNADYVKCIH
ASGEFFSGYNAVIQSWQVAFNWEEGINFQVRDVRARVLTDMAWVSMKTYVDMDTGPFNVTNVYEYHNGRWYMVHHHSSVMLIVGDVEEQMVHG