; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G006990 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G006990
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein SEH1
Genome locationCma_Chr04:3543328..3552072
RNA-Seq ExpressionCmaCh04G006990
SyntenyCmaCh04G006990
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]3.5e-17898.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKG+AIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

KAG7031165.1 Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]7.7e-17898.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

XP_022942103.1 protein SEH1 [Cucurbita moschata]5.9e-17898.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGN+KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

XP_022981824.1 protein SEH1 [Cucurbita maxima]1.4e-17999.68Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]1.7e-17798.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFK HEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAF SDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein2.2e-15485.44Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS++RL T S+DGT+V+FDS  PSSSSTS T TSNFKAHE AI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNSSQILD+QFGNSSSGLKMIAAFSDG +KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFV+AF S+TPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        +SAKVWEFD+AH RWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIW LGL+PD DGRLS ERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

A0A1S3BTS7 protein SEH11.3e-15988.29Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S+SRL T S+DGT+V+FDS  PSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNSSQILD+QFGNSSSGLKMIAAFSDG +KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIWRLGL+PD+DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

A0A6J1C5X6 protein SEH13.2e-16188.92Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+V+FDS DPSSSSTSLTRTSNFKAHEAAI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNS+Q+LDIQFGNSSSGLKMIAAFS  +VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA  S+TPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHN EVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

A0A6J1FTY0 protein SEH12.9e-17898.1Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGN+KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

A0A6J1J2X1 protein SEH16.8e-18099.68Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGL
        GKDGMVRLWQSNLNG+
Subjt:  GKDGMVRLWQSNLNGL

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH17.1e-3330.1Show/hide
Query:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFK-----SNSS
        ++++   R+ T S+D +V V+D  D    +     T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++   Q  LS   K      + +
Subjt:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFK-----SNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKV--WEF
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+   R  S  +     D+    S KV  +E+
Subjt:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKV--WEF

Query:  DRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRL---GLNPDSDG--RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD
            +++  V  L    D    V+ +A+A N+GR + V+A+AT K + I++L        S G  +L  +  A   GHNS+VW + W++    LAS+G D
Subjt:  DRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRL---GLNPDSDG--RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSN
        G VRLW++N
Subjt:  GMVRLWQSN

Q4FZW5 Nucleoporin SEH1-A3.9e-3127.18Show/hide
Query:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V V+D     S + +   T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD
           +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HNS+VW + W++ G  LAS+G D
Subjt:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSN
        G VRLW++N
Subjt:  GMVRLWQSN

Q5U4Y8 Nucleoporin SEH15.1e-3127.18Show/hide
Query:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V V+D     S +     T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD
           +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HNS+VW + W++ G  LAS+G D
Subjt:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSN
        G VRLW++N
Subjt:  GMVRLWQSN

Q6GNF1 Nucleoporin SEH1-B1.7e-3127.18Show/hide
Query:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V V+D     S + +   T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD
           +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HNS+VW + W++ G  LAS+G D
Subjt:  RAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSN
        G VRLW++N
Subjt:  GMVRLWQSN

Q93VR9 Protein SEH11.1e-11862.86Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S  RL  GS +G + +++S   +SSS++ + TS  +  E++I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K  K+ SSQ+LD+QFG S   LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP +GE Q+ SFVLAF SD+P L
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        +S+K+WEFD AH RWL VAELAL  DKGD VYA++WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH  EVW MEWDM GMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNG
        G DGMV+LWQSNLNG
Subjt:  GKDGMVRLWQSNLNG

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein7.8e-12062.86Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S  RL  GS +G + +++S   +SSS++ + TS  +  E++I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K  K+ SSQ+LD+QFG S   LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP +GE Q+ SFVLAF SD+P L
Subjt:  LSKHFKSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST
        +S+K+WEFD AH RWL VAELAL  DKGD VYA++WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH  EVW MEWDM GMTLAST
Subjt:  DSAKVWEFDRAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNG
        G DGMV+LWQSNLNG
Subjt:  GKDGMVRLWQSNLNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACCGGTTCGGCGGACGGAACCGTCGTCGTC
TTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAACTTCAAGGCTCATGAGGCTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAG
TATGGTGATTCTATTGCATGCATTTGTTCGGATGGAAGTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTC
AAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGATTGCGGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTT
ATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCGAGTATC
TCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCGAGTTTTGTTTTGGCTTTTCGTTCGGATACACCACAGCTTGATTCTGCCAAGGTTTGGGAATTTGATCGG
GCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAG
GTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTTGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTGGCTCTGCTTTCTGGG
CATAACAGCGAGGTGTGGGACATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGT
TTGTCAAGAAGCAGAAGCTTTCTATCTAAGGAGAAGAAGCAGAAGGTAGAGGAAATGGAAGACCCAAATGTTAAAGAAACAGAGACAACAAACATGGAAGTAGCC
AGTTTGAAATTTGGCCATTCTCCTTCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCCCACGAAACCGAAATCAAAGGGGTTTTGTTGGAGCAGACGAGGGCGCGAAATAGAGAATTGAGATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTT
TGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACCGGTTCGGCGGACGGAACCGTCGTCGTCTTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTA
ACTCGCACTTCAAACTTCAAGGCTCATGAGGCTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTATTGCATGCATTTGTTCGGATGGAAGT
TCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCTCAAATCCTAGACATCCAATTTGGA
AATTCCTCTTCTGGTCTGAAAATGATTGCGGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCT
GAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCGAGTATCTCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCGAGT
TTTGTTTTGGCTTTTCGTTCGGATACACCACAGCTTGATTCTGCCAAGGTTTGGGAATTTGATCGGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTG
GAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGG
CGCCTTGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTGGCTCTGCTTTCTGGGCATAACAGCGAGGTGTGGGACATGGAGTGGGACATGGGT
GGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTTTGTCAAGAAGCAGAAGCTTTCTATCTAAGGAGAAGAAG
CAGAAGGTAGAGGAAATGGAAGACCCAAATGTTAAAGAAACAGAGACAACAAACATGGAAGTAGCCAGTTTGAAATTTGGCCATTCTCCTTCGGCTTAA
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVVFDSLDPSSSSTSLTRTSNFKAHEAAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHF
KSNSSQILDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKVWEFDR
AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNSEVWDMEWDMGGMTLASTGKDGMVRLWQSNLNG
LSRSRSFLSKEKKQKVEEMEDPNVKETETTNMEVASLKFGHSPSA