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CmaCh04G007560 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G007560
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationCma_Chr04:3854313..3855201
RNA-Seq ExpressionCmaCh04G007560
SyntenyCmaCh04G007560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600582.1 hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sororia]2.6e-7578.16Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMM---------------------------------DKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMM                                 DKA DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMM---------------------------------DKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022942848.1 late embryogenesis abundant protein D-29-like [Cucurbita moschata]1.4e-7679.13Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMMDKAG---------------------------------DAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAG                                 DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAG---------------------------------DAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022983013.1 late embryogenesis abundant protein D-29-like [Cucurbita maxima]7.4e-86100Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL
        HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL
Subjt:  HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL

XP_023533965.1 uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo]1.2e-7075.73Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLL A EMGVVEKCRG +G+GA++DVKDNITEI EM NL+GKAEA+KKGASEVFNDAKDAAES SNWASAEI+KGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMMDKAGD---------------------------------AKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAGD                                 AKTKAK+T +NGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKE ASHAAVQIGAKIR
Subjt:  HMMDKAGD---------------------------------AKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]4.9e-3748.23Show/hide
Query:  TSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAHHM
        TS  S VAV+WLL      V +KCRG +G+ A++DVKDN++EIT+  +LD KAEA+K GAS+VF+DAK+ AESWSNWA  +ISKGLG   E LK+TAH++
Subjt:  TSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAHHM

Query:  MDKAGDA-------------------------------------------------------KTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVN
        +DKAGDA                                                       KTKAKETLV+GK+KAA+VYEAAK EV ++  A KE VN
Subjt:  MDKAGDA-------------------------------------------------------KTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVN

Query:  CEAAKEMASHAAVQIGAKIREKSSEL
        C AAKEMAS +A +IG +IREK++EL
Subjt:  CEAAKEMASHAAVQIGAKIREKSSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein3.7e-3045.95Show/hide
Query:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ AVKDVK+N++EI E ANLD KAEA+K  ASEV+ +AKD  ESWSNWA  +IS+GLGL EE +K+TA
Subjt:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA

Query:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDA  KT                                              K KETLV+GK+KAA++YEAAK          K+  NCE A
Subjt:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREKS+EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A1S3BT31 late embryogenesis abundant protein D-29-like6.2e-3046.85Show/hide
Query:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ AV+DVKDN++EI E A LD KAEA+K  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA

Query:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDA  KT                                              K KETLV+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like6.2e-3046.85Show/hide
Query:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA
        MG  T +  VAV+WL+      V EKC G  G+ AV+DVKDN++EI E A LD KAEA+K  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTSTWSF-VAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTA

Query:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ DKAGDA  KT                                              K KETLV+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDKAGDA--KT----------------------------------------------KAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A6J1FVT6 late embryogenesis abundant protein D-29-like6.8e-7779.13Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMMDKAG---------------------------------DAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDKAG                                 DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDKAG---------------------------------DAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

A0A6J1J6J8 late embryogenesis abundant protein D-29-like3.6e-86100Show/hide
Query:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
        MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH
Subjt:  MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAH

Query:  HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL
        HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL
Subjt:  HMMDKAGDAKTKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGTGGAGATGGGGGTGGTTGAAAAATGCAGGGGTGAAATAGGACAAGGAGCAGTGAAGGA
TGTGAAGGATAATATCACTGAAATTACGGAGATGGCGAATCTTGATGGAAAAGCAGAAGCCCTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCGGCCG
AGTCTTGGTCCAACTGGGCTTCTGCCGAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACAAAGCCGGCGACGCGAAA
ACGAAGGCCAAAGAGACGCTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAGGCGGCTAAAACCGAGGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAA
CTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATACTTTTCAGATCAAAAGGCAGCGATGGGGACAAGCACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGTGGAGATGGGGGTGGTTGAAAAATGCAGGGGTG
AAATAGGACAAGGAGCAGTGAAGGATGTGAAGGATAATATCACTGAAATTACGGAGATGGCGAATCTTGATGGAAAAGCAGAAGCCCTTAAGAAAGGTGCTTCTGAAGTG
TTTAATGACGCCAAGGACGCGGCCGAGTCTTGGTCCAACTGGGCTTCTGCCGAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACAT
GATGGACAAAGCCGGCGACGCGAAAACGAAGGCCAAAGAGACGCTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAGGCGGCTAAAACCGAGGTGGAGCGGGAAG
TTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTGCTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGAGCT
TGACGCGCGGCTGTCTTTTTTGTATTGATTTTCATTTTATTTTATTTTTGGGTCTAGGCTGAGTTGTAAAATATTCATTATTGTTGATACTGTCTTGTTAAGGATATTTA
GTAATAAATTATAGTTTACCATATATATTATATTTGATATTTTAGTATAAGGTAAATATCTAATATTTGCCTTATTATCATAG
Protein sequenceShow/hide protein sequence
MGTSTWSFVAVLWLLWAVEMGVVEKCRGEIGQGAVKDVKDNITEITEMANLDGKAEALKKGASEVFNDAKDAAESWSNWASAEISKGLGLEEEGLKQTAHHMMDKAGDAK
TKAKETLVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL